data_6YPI
#
_model_server_result.job_id            eBkz_d8KNYZk169izfCkOQ 
_model_server_result.datetime_utc      '2024-11-21 23:09:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6ypi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":101}' 
#
_entry.id    6YPI 
#
_exptl.entry_id    6YPI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          109.81 
_cell.angle_gamma         90 
_cell.entry_id            6YPI 
_cell.length_a            62.237 
_cell.length_b            35.015 
_cell.length_c            43.229 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YPI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 37 A CYS 35 1_555 B ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.206 ? 
metalc ? metalc2 A NE2 HIS 63 A HIS 61 1_555 B ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? 
metalc ? metalc3 A NE2 HIS 67 A HIS 65 1_555 B ZN ZN . A ZN 101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.002 ? 
metalc ? metalc4 B ZN ZN . A ZN 101 1_555 E O2 BEZ . A BEZ 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.933 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6YPI 
_atom_sites.fract_transf_matrix[1][1]    0.016068 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005789 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.028559 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.024588 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 ZN A 1 101 1 ZN ZN . 
C 3 PEG A 1 102 1 PEG PEG . 
D 4 DMX A 1 103 1 DMX DRG . 
E 5 BEZ A 1 104 1 BEZ BEZ . 
F 6 HOH A 1 201 23 HOH HOH . 
F 6 HOH A 2 202 31 HOH HOH . 
F 6 HOH A 3 203 6 HOH HOH . 
F 6 HOH A 4 204 16 HOH HOH . 
F 6 HOH A 5 205 27 HOH HOH . 
F 6 HOH A 6 206 11 HOH HOH . 
F 6 HOH A 7 207 26 HOH HOH . 
F 6 HOH A 8 208 4 HOH HOH . 
F 6 HOH A 9 209 3 HOH HOH . 
F 6 HOH A 10 210 17 HOH HOH . 
F 6 HOH A 11 211 24 HOH HOH . 
F 6 HOH A 12 212 12 HOH HOH . 
F 6 HOH A 13 213 30 HOH HOH . 
F 6 HOH A 14 214 13 HOH HOH . 
F 6 HOH A 15 215 19 HOH HOH . 
F 6 HOH A 16 216 22 HOH HOH . 
F 6 HOH A 17 217 2 HOH HOH . 
F 6 HOH A 18 218 8 HOH HOH . 
F 6 HOH A 19 219 28 HOH HOH . 
F 6 HOH A 20 220 7 HOH HOH . 
F 6 HOH A 21 221 33 HOH HOH . 
F 6 HOH A 22 222 32 HOH HOH . 
F 6 HOH A 23 223 5 HOH HOH . 
F 6 HOH A 24 224 10 HOH HOH . 
F 6 HOH A 25 225 14 HOH HOH . 
F 6 HOH A 26 226 1 HOH HOH . 
F 6 HOH A 27 227 21 HOH HOH . 
F 6 HOH A 28 228 20 HOH HOH . 
F 6 HOH A 29 229 9 HOH HOH . 
F 6 HOH A 30 230 34 HOH HOH . 
F 6 HOH A 31 231 18 HOH HOH . 
F 6 HOH A 32 232 15 HOH HOH . 
F 6 HOH A 33 233 25 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         B 
_atom_site.label_entity_id       2 
_atom_site.Cartn_x               12.07 
_atom_site.Cartn_y               23.9 
_atom_site.Cartn_z               23.042 
_atom_site.occupancy             0.68 
_atom_site.B_iso_or_equiv        17.98 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           101 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           62 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           267 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#