data_6YPS
#
_model_server_result.job_id            5tQ3szajKhFeaz-ueeCSmQ 
_model_server_result.datetime_utc      '2024-11-01 04:32:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yps 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":401}' 
#
_entry.id    6YPS 
#
_exptl.entry_id    6YPS 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6YPS 
_cell.length_a            51.736 
_cell.length_b            71.316 
_cell.length_c            97.495 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YPS 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C PHE 141 A PHE 138 1_555 A N SEP 142 A SEP 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? 
covale ? covale2 A C SEP 142 A SEP 139 1_555 A N GLU 143 A GLU 140 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
covale ? covale3 A C TRP 199 A TRP 196 1_555 A N TPO 200 A TPO 197 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 A C TPO 200 A TPO 197 1_555 A N LEU 201 A LEU 198 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale5 A C VAL 340 A VAL 337 1_555 A N SEP 341 A SEP 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale6 A C SEP 341 A SEP 338 1_555 A N ILE 342 A ILE 339 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6YPS 
_atom_sites.fract_transf_matrix[1][1]    0.019329 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014022 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010257 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 DMS A 1 401 2 DMS DMS . 
C 3 P72 A 1 402 1 P72 209 . 
D 4 HOH A 1 501 182 HOH HOH . 
D 4 HOH A 2 502 211 HOH HOH . 
D 4 HOH A 3 503 263 HOH HOH . 
D 4 HOH A 4 504 236 HOH HOH . 
D 4 HOH A 5 505 64 HOH HOH . 
D 4 HOH A 6 506 242 HOH HOH . 
D 4 HOH A 7 507 191 HOH HOH . 
D 4 HOH A 8 508 116 HOH HOH . 
D 4 HOH A 9 509 87 HOH HOH . 
D 4 HOH A 10 510 50 HOH HOH . 
D 4 HOH A 11 511 15 HOH HOH . 
D 4 HOH A 12 512 249 HOH HOH . 
D 4 HOH A 13 513 206 HOH HOH . 
D 4 HOH A 14 514 234 HOH HOH . 
D 4 HOH A 15 515 168 HOH HOH . 
D 4 HOH A 16 516 131 HOH HOH . 
D 4 HOH A 17 517 210 HOH HOH . 
D 4 HOH A 18 518 70 HOH HOH . 
D 4 HOH A 19 519 6 HOH HOH . 
D 4 HOH A 20 520 63 HOH HOH . 
D 4 HOH A 21 521 218 HOH HOH . 
D 4 HOH A 22 522 209 HOH HOH . 
D 4 HOH A 23 523 181 HOH HOH . 
D 4 HOH A 24 524 176 HOH HOH . 
D 4 HOH A 25 525 59 HOH HOH . 
D 4 HOH A 26 526 214 HOH HOH . 
D 4 HOH A 27 527 109 HOH HOH . 
D 4 HOH A 28 528 193 HOH HOH . 
D 4 HOH A 29 529 10 HOH HOH . 
D 4 HOH A 30 530 127 HOH HOH . 
D 4 HOH A 31 531 148 HOH HOH . 
D 4 HOH A 32 532 31 HOH HOH . 
D 4 HOH A 33 533 262 HOH HOH . 
D 4 HOH A 34 534 204 HOH HOH . 
D 4 HOH A 35 535 256 HOH HOH . 
D 4 HOH A 36 536 196 HOH HOH . 
D 4 HOH A 37 537 162 HOH HOH . 
D 4 HOH A 38 538 267 HOH HOH . 
D 4 HOH A 39 539 66 HOH HOH . 
D 4 HOH A 40 540 123 HOH HOH . 
D 4 HOH A 41 541 139 HOH HOH . 
D 4 HOH A 42 542 192 HOH HOH . 
D 4 HOH A 43 543 8 HOH HOH . 
D 4 HOH A 44 544 241 HOH HOH . 
D 4 HOH A 45 545 11 HOH HOH . 
D 4 HOH A 46 546 14 HOH HOH . 
D 4 HOH A 47 547 13 HOH HOH . 
D 4 HOH A 48 548 190 HOH HOH . 
D 4 HOH A 49 549 53 HOH HOH . 
D 4 HOH A 50 550 96 HOH HOH . 
D 4 HOH A 51 551 167 HOH HOH . 
D 4 HOH A 52 552 84 HOH HOH . 
D 4 HOH A 53 553 227 HOH HOH . 
D 4 HOH A 54 554 91 HOH HOH . 
D 4 HOH A 55 555 60 HOH HOH . 
D 4 HOH A 56 556 255 HOH HOH . 
D 4 HOH A 57 557 7 HOH HOH . 
D 4 HOH A 58 558 147 HOH HOH . 
D 4 HOH A 59 559 77 HOH HOH . 
D 4 HOH A 60 560 266 HOH HOH . 
D 4 HOH A 61 561 260 HOH HOH . 
D 4 HOH A 62 562 112 HOH HOH . 
D 4 HOH A 63 563 219 HOH HOH . 
D 4 HOH A 64 564 99 HOH HOH . 
D 4 HOH A 65 565 24 HOH HOH . 
D 4 HOH A 66 566 83 HOH HOH . 
D 4 HOH A 67 567 16 HOH HOH . 
D 4 HOH A 68 568 62 HOH HOH . 
D 4 HOH A 69 569 18 HOH HOH . 
D 4 HOH A 70 570 19 HOH HOH . 
D 4 HOH A 71 571 5 HOH HOH . 
D 4 HOH A 72 572 36 HOH HOH . 
D 4 HOH A 73 573 30 HOH HOH . 
D 4 HOH A 74 574 198 HOH HOH . 
D 4 HOH A 75 575 247 HOH HOH . 
D 4 HOH A 76 576 217 HOH HOH . 
D 4 HOH A 77 577 252 HOH HOH . 
D 4 HOH A 78 578 75 HOH HOH . 
D 4 HOH A 79 579 133 HOH HOH . 
D 4 HOH A 80 580 251 HOH HOH . 
D 4 HOH A 81 581 239 HOH HOH . 
D 4 HOH A 82 582 132 HOH HOH . 
D 4 HOH A 83 583 265 HOH HOH . 
D 4 HOH A 84 584 76 HOH HOH . 
D 4 HOH A 85 585 95 HOH HOH . 
D 4 HOH A 86 586 257 HOH HOH . 
D 4 HOH A 87 587 195 HOH HOH . 
D 4 HOH A 88 588 212 HOH HOH . 
D 4 HOH A 89 589 178 HOH HOH . 
D 4 HOH A 90 590 108 HOH HOH . 
D 4 HOH A 91 591 9 HOH HOH . 
D 4 HOH A 92 592 78 HOH HOH . 
D 4 HOH A 93 593 138 HOH HOH . 
D 4 HOH A 94 594 65 HOH HOH . 
D 4 HOH A 95 595 23 HOH HOH . 
D 4 HOH A 96 596 45 HOH HOH . 
D 4 HOH A 97 597 143 HOH HOH . 
D 4 HOH A 98 598 94 HOH HOH . 
D 4 HOH A 99 599 51 HOH HOH . 
D 4 HOH A 100 600 37 HOH HOH . 
D 4 HOH A 101 601 71 HOH HOH . 
D 4 HOH A 102 602 47 HOH HOH . 
D 4 HOH A 103 603 201 HOH HOH . 
D 4 HOH A 104 604 146 HOH HOH . 
D 4 HOH A 105 605 33 HOH HOH . 
D 4 HOH A 106 606 72 HOH HOH . 
D 4 HOH A 107 607 21 HOH HOH . 
D 4 HOH A 108 608 42 HOH HOH . 
D 4 HOH A 109 609 49 HOH HOH . 
D 4 HOH A 110 610 68 HOH HOH . 
D 4 HOH A 111 611 155 HOH HOH . 
D 4 HOH A 112 612 52 HOH HOH . 
D 4 HOH A 113 613 25 HOH HOH . 
D 4 HOH A 114 614 107 HOH HOH . 
D 4 HOH A 115 615 22 HOH HOH . 
D 4 HOH A 116 616 98 HOH HOH . 
D 4 HOH A 117 617 197 HOH HOH . 
D 4 HOH A 118 618 154 HOH HOH . 
D 4 HOH A 119 619 259 HOH HOH . 
D 4 HOH A 120 620 202 HOH HOH . 
D 4 HOH A 121 621 215 HOH HOH . 
D 4 HOH A 122 622 46 HOH HOH . 
D 4 HOH A 123 623 149 HOH HOH . 
D 4 HOH A 124 624 226 HOH HOH . 
D 4 HOH A 125 625 32 HOH HOH . 
D 4 HOH A 126 626 172 HOH HOH . 
D 4 HOH A 127 627 253 HOH HOH . 
D 4 HOH A 128 628 118 HOH HOH . 
D 4 HOH A 129 629 203 HOH HOH . 
D 4 HOH A 130 630 105 HOH HOH . 
D 4 HOH A 131 631 85 HOH HOH . 
D 4 HOH A 132 632 152 HOH HOH . 
D 4 HOH A 133 633 55 HOH HOH . 
D 4 HOH A 134 634 104 HOH HOH . 
D 4 HOH A 135 635 27 HOH HOH . 
D 4 HOH A 136 636 43 HOH HOH . 
D 4 HOH A 137 637 153 HOH HOH . 
D 4 HOH A 138 638 110 HOH HOH . 
D 4 HOH A 139 639 89 HOH HOH . 
D 4 HOH A 140 640 238 HOH HOH . 
D 4 HOH A 141 641 151 HOH HOH . 
D 4 HOH A 142 642 88 HOH HOH . 
D 4 HOH A 143 643 73 HOH HOH . 
D 4 HOH A 144 644 82 HOH HOH . 
D 4 HOH A 145 645 136 HOH HOH . 
D 4 HOH A 146 646 160 HOH HOH . 
D 4 HOH A 147 647 248 HOH HOH . 
D 4 HOH A 148 648 103 HOH HOH . 
D 4 HOH A 149 649 208 HOH HOH . 
D 4 HOH A 150 650 205 HOH HOH . 
D 4 HOH A 151 651 188 HOH HOH . 
D 4 HOH A 152 652 244 HOH HOH . 
D 4 HOH A 153 653 69 HOH HOH . 
D 4 HOH A 154 654 61 HOH HOH . 
D 4 HOH A 155 655 67 HOH HOH . 
D 4 HOH A 156 656 28 HOH HOH . 
D 4 HOH A 157 657 158 HOH HOH . 
D 4 HOH A 158 658 100 HOH HOH . 
D 4 HOH A 159 659 254 HOH HOH . 
D 4 HOH A 160 660 80 HOH HOH . 
D 4 HOH A 161 661 144 HOH HOH . 
D 4 HOH A 162 662 39 HOH HOH . 
D 4 HOH A 163 663 135 HOH HOH . 
D 4 HOH A 164 664 17 HOH HOH . 
D 4 HOH A 165 665 165 HOH HOH . 
D 4 HOH A 166 666 115 HOH HOH . 
D 4 HOH A 167 667 35 HOH HOH . 
D 4 HOH A 168 668 97 HOH HOH . 
D 4 HOH A 169 669 237 HOH HOH . 
D 4 HOH A 170 670 86 HOH HOH . 
D 4 HOH A 171 671 93 HOH HOH . 
D 4 HOH A 172 672 40 HOH HOH . 
D 4 HOH A 173 673 261 HOH HOH . 
D 4 HOH A 174 674 140 HOH HOH . 
D 4 HOH A 175 675 130 HOH HOH . 
D 4 HOH A 176 676 26 HOH HOH . 
D 4 HOH A 177 677 164 HOH HOH . 
D 4 HOH A 178 678 240 HOH HOH . 
D 4 HOH A 179 679 128 HOH HOH . 
D 4 HOH A 180 680 221 HOH HOH . 
D 4 HOH A 181 681 194 HOH HOH . 
D 4 HOH A 182 682 225 HOH HOH . 
D 4 HOH A 183 683 163 HOH HOH . 
D 4 HOH A 184 684 184 HOH HOH . 
D 4 HOH A 185 685 81 HOH HOH . 
D 4 HOH A 186 686 48 HOH HOH . 
D 4 HOH A 187 687 258 HOH HOH . 
D 4 HOH A 188 688 58 HOH HOH . 
D 4 HOH A 189 689 111 HOH HOH . 
D 4 HOH A 190 690 41 HOH HOH . 
D 4 HOH A 191 691 159 HOH HOH . 
D 4 HOH A 192 692 200 HOH HOH . 
D 4 HOH A 193 693 187 HOH HOH . 
D 4 HOH A 194 694 29 HOH HOH . 
D 4 HOH A 195 695 245 HOH HOH . 
D 4 HOH A 196 696 54 HOH HOH . 
D 4 HOH A 197 697 189 HOH HOH . 
D 4 HOH A 198 698 119 HOH HOH . 
D 4 HOH A 199 699 124 HOH HOH . 
D 4 HOH A 200 700 177 HOH HOH . 
D 4 HOH A 201 701 56 HOH HOH . 
D 4 HOH A 202 702 166 HOH HOH . 
D 4 HOH A 203 703 173 HOH HOH . 
D 4 HOH A 204 704 264 HOH HOH . 
D 4 HOH A 205 705 122 HOH HOH . 
D 4 HOH A 206 706 161 HOH HOH . 
D 4 HOH A 207 707 179 HOH HOH . 
D 4 HOH A 208 708 125 HOH HOH . 
D 4 HOH A 209 709 213 HOH HOH . 
D 4 HOH A 210 710 243 HOH HOH . 
D 4 HOH A 211 711 186 HOH HOH . 
D 4 HOH A 212 712 185 HOH HOH . 
D 4 HOH A 213 713 180 HOH HOH . 
D 4 HOH A 214 714 145 HOH HOH . 
D 4 HOH A 215 715 79 HOH HOH . 
D 4 HOH A 216 716 207 HOH HOH . 
D 4 HOH A 217 717 126 HOH HOH . 
D 4 HOH A 218 718 230 HOH HOH . 
D 4 HOH A 219 719 235 HOH HOH . 
D 4 HOH A 220 720 223 HOH HOH . 
D 4 HOH A 221 721 74 HOH HOH . 
D 4 HOH A 222 722 174 HOH HOH . 
D 4 HOH A 223 723 250 HOH HOH . 
D 4 HOH A 224 724 232 HOH HOH . 
D 4 HOH A 225 725 216 HOH HOH . 
D 4 HOH A 226 726 157 HOH HOH . 
D 4 HOH A 227 727 171 HOH HOH . 
D 4 HOH A 228 728 233 HOH HOH . 
D 4 HOH A 229 729 170 HOH HOH . 
D 4 HOH A 230 730 175 HOH HOH . 
D 4 HOH A 231 731 229 HOH HOH . 
D 4 HOH A 232 732 156 HOH HOH . 
D 4 HOH A 233 733 231 HOH HOH . 
D 4 HOH A 234 734 228 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . B 2 9.431 25.246 15.06 1 58.9 ? S DMS 401 A 1 
HETATM 2 O O DMS . . . B 2 10.69 25.848 14.524 1 57.89 ? O DMS 401 A 1 
HETATM 3 C C1 DMS . . . B 2 9.812 23.672 15.874 1 58.52 ? C1 DMS 401 A 1 
HETATM 4 C C2 DMS . . . B 2 8.846 26.206 16.485 1 58.81 ? C2 DMS 401 A 1 
#
_model_server_stats.io_time_ms              73 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           4 
#