data_6YQZ # _model_server_result.job_id aNp-E-ppSwZDk9TO766M8Q _model_server_result.datetime_utc '2024-10-19 04:00:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yqz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 6YQZ # _exptl.entry_id 6YQZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 305.374 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2,4-dimethyl-5-[(2-phenylphenyl)methylamino]pyridazin-3-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YQZ _cell.length_a 37.94 _cell.length_b 44.37 _cell.length_c 78.05 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YQZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C19 H19 N3 O' _chem_comp.formula_weight 305.374 _chem_comp.id P8W _chem_comp.mon_nstd_flag . _chem_comp.name 2,4-dimethyl-5-[(2-phenylphenyl)methylamino]pyridazin-3-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms Biphenyl-methylamino-dimethylpyridazinone # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C25 C23 P8W doub 246 n y C25 C27 P8W sing 247 n y C23 C22 P8W sing 248 n y C27 C29 P8W doub 249 n y C22 C21 P8W sing 250 n n C22 C31 P8W doub 251 n y C29 C31 P8W sing 252 n y C19 C21 P8W doub 253 n y C19 C17 P8W sing 254 n y C21 C12 P8W sing 255 n y C17 C15 P8W doub 256 n y C12 C09 P8W sing 257 n n C12 C13 P8W doub 258 n y C09 N07 P8W sing 259 n n N07 C06 P8W sing 260 n n C15 C13 P8W sing 261 n y C01 C05 P8W sing 262 n n C06 C05 P8W doub 263 n n C06 C33 P8W sing 264 n n C05 C41 P8W sing 265 n n C33 N35 P8W doub 266 n n C41 O42 P8W doub 267 n n C41 N36 P8W sing 268 n n N35 N36 P8W sing 269 n n N36 C37 P8W sing 270 n n C13 H1 P8W sing 271 n n C15 H2 P8W sing 272 n n C17 H3 P8W sing 273 n n C01 H4 P8W sing 274 n n C01 H5 P8W sing 275 n n C01 H6 P8W sing 276 n n N07 H7 P8W sing 277 n n C09 H8 P8W sing 278 n n C09 H9 P8W sing 279 n n C19 H10 P8W sing 280 n n C23 H11 P8W sing 281 n n C25 H12 P8W sing 282 n n C27 H13 P8W sing 283 n n C29 H14 P8W sing 284 n n C31 H15 P8W sing 285 n n C33 H16 P8W sing 286 n n C37 H17 P8W sing 287 n n C37 H18 P8W sing 288 n n C37 H19 P8W sing 289 n n # _atom_sites.entry_id 6YQZ _atom_sites.fract_transf_matrix[1][1] 0.026357 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.022538 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012812 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 P8W A 1 201 1 P8W LIG . C 3 EDO A 1 202 1 EDO EDO . D 4 HOH A 1 301 233 HOH HOH . D 4 HOH A 2 302 73 HOH HOH . D 4 HOH A 3 303 2 HOH HOH . D 4 HOH A 4 304 200 HOH HOH . D 4 HOH A 5 305 227 HOH HOH . D 4 HOH A 6 306 257 HOH HOH . D 4 HOH A 7 307 163 HOH HOH . D 4 HOH A 8 308 231 HOH HOH . D 4 HOH A 9 309 249 HOH HOH . D 4 HOH A 10 310 30 HOH HOH . D 4 HOH A 11 311 108 HOH HOH . D 4 HOH A 12 312 5 HOH HOH . D 4 HOH A 13 313 58 HOH HOH . D 4 HOH A 14 314 26 HOH HOH . D 4 HOH A 15 315 158 HOH HOH . D 4 HOH A 16 316 238 HOH HOH . D 4 HOH A 17 317 91 HOH HOH . D 4 HOH A 18 318 25 HOH HOH . D 4 HOH A 19 319 12 HOH HOH . D 4 HOH A 20 320 85 HOH HOH . D 4 HOH A 21 321 89 HOH HOH . D 4 HOH A 22 322 78 HOH HOH . D 4 HOH A 23 323 82 HOH HOH . D 4 HOH A 24 324 152 HOH HOH . D 4 HOH A 25 325 120 HOH HOH . D 4 HOH A 26 326 184 HOH HOH . D 4 HOH A 27 327 74 HOH HOH . D 4 HOH A 28 328 32 HOH HOH . D 4 HOH A 29 329 22 HOH HOH . D 4 HOH A 30 330 71 HOH HOH . D 4 HOH A 31 331 51 HOH HOH . D 4 HOH A 32 332 90 HOH HOH . D 4 HOH A 33 333 212 HOH HOH . D 4 HOH A 34 334 220 HOH HOH . D 4 HOH A 35 335 76 HOH HOH . D 4 HOH A 36 336 242 HOH HOH . D 4 HOH A 37 337 162 HOH HOH . D 4 HOH A 38 338 34 HOH HOH . D 4 HOH A 39 339 8 HOH HOH . D 4 HOH A 40 340 175 HOH HOH . D 4 HOH A 41 341 109 HOH HOH . D 4 HOH A 42 342 185 HOH HOH . D 4 HOH A 43 343 116 HOH HOH . D 4 HOH A 44 344 1 HOH HOH . D 4 HOH A 45 345 258 HOH HOH . D 4 HOH A 46 346 132 HOH HOH . D 4 HOH A 47 347 19 HOH HOH . D 4 HOH A 48 348 216 HOH HOH . D 4 HOH A 49 349 219 HOH HOH . D 4 HOH A 50 350 149 HOH HOH . D 4 HOH A 51 351 40 HOH HOH . D 4 HOH A 52 352 59 HOH HOH . D 4 HOH A 53 353 54 HOH HOH . D 4 HOH A 54 354 224 HOH HOH . D 4 HOH A 55 355 93 HOH HOH . D 4 HOH A 56 356 38 HOH HOH . D 4 HOH A 57 357 182 HOH HOH . D 4 HOH A 58 358 131 HOH HOH . D 4 HOH A 59 359 130 HOH HOH . D 4 HOH A 60 360 28 HOH HOH . D 4 HOH A 61 361 151 HOH HOH . D 4 HOH A 62 362 198 HOH HOH . D 4 HOH A 63 363 88 HOH HOH . D 4 HOH A 64 364 27 HOH HOH . D 4 HOH A 65 365 45 HOH HOH . D 4 HOH A 66 366 235 HOH HOH . D 4 HOH A 67 367 77 HOH HOH . D 4 HOH A 68 368 148 HOH HOH . D 4 HOH A 69 369 35 HOH HOH . D 4 HOH A 70 370 95 HOH HOH . D 4 HOH A 71 371 48 HOH HOH . D 4 HOH A 72 372 53 HOH HOH . D 4 HOH A 73 373 196 HOH HOH . D 4 HOH A 74 374 180 HOH HOH . D 4 HOH A 75 375 47 HOH HOH . D 4 HOH A 76 376 44 HOH HOH . D 4 HOH A 77 377 66 HOH HOH . D 4 HOH A 78 378 178 HOH HOH . D 4 HOH A 79 379 33 HOH HOH . D 4 HOH A 80 380 13 HOH HOH . D 4 HOH A 81 381 42 HOH HOH . D 4 HOH A 82 382 94 HOH HOH . D 4 HOH A 83 383 23 HOH HOH . D 4 HOH A 84 384 18 HOH HOH . D 4 HOH A 85 385 183 HOH HOH . D 4 HOH A 86 386 87 HOH HOH . D 4 HOH A 87 387 4 HOH HOH . D 4 HOH A 88 388 9 HOH HOH . D 4 HOH A 89 389 10 HOH HOH . D 4 HOH A 90 390 122 HOH HOH . D 4 HOH A 91 391 206 HOH HOH . D 4 HOH A 92 392 81 HOH HOH . D 4 HOH A 93 393 96 HOH HOH . D 4 HOH A 94 394 137 HOH HOH . D 4 HOH A 95 395 179 HOH HOH . D 4 HOH A 96 396 255 HOH HOH . D 4 HOH A 97 397 232 HOH HOH . D 4 HOH A 98 398 17 HOH HOH . D 4 HOH A 99 399 103 HOH HOH . D 4 HOH A 100 400 7 HOH HOH . D 4 HOH A 101 401 111 HOH HOH . D 4 HOH A 102 402 41 HOH HOH . D 4 HOH A 103 403 209 HOH HOH . D 4 HOH A 104 404 11 HOH HOH . D 4 HOH A 105 405 63 HOH HOH . D 4 HOH A 106 406 84 HOH HOH . D 4 HOH A 107 407 197 HOH HOH . D 4 HOH A 108 408 164 HOH HOH . D 4 HOH A 109 409 57 HOH HOH . D 4 HOH A 110 410 100 HOH HOH . D 4 HOH A 111 411 37 HOH HOH . D 4 HOH A 112 412 20 HOH HOH . D 4 HOH A 113 413 46 HOH HOH . D 4 HOH A 114 414 199 HOH HOH . D 4 HOH A 115 415 222 HOH HOH . D 4 HOH A 116 416 127 HOH HOH . D 4 HOH A 117 417 226 HOH HOH . D 4 HOH A 118 418 114 HOH HOH . D 4 HOH A 119 419 86 HOH HOH . D 4 HOH A 120 420 29 HOH HOH . D 4 HOH A 121 421 181 HOH HOH . D 4 HOH A 122 422 24 HOH HOH . D 4 HOH A 123 423 193 HOH HOH . D 4 HOH A 124 424 31 HOH HOH . D 4 HOH A 125 425 64 HOH HOH . D 4 HOH A 126 426 195 HOH HOH . D 4 HOH A 127 427 39 HOH HOH . D 4 HOH A 128 428 43 HOH HOH . D 4 HOH A 129 429 3 HOH HOH . D 4 HOH A 130 430 115 HOH HOH . D 4 HOH A 131 431 194 HOH HOH . D 4 HOH A 132 432 142 HOH HOH . D 4 HOH A 133 433 167 HOH HOH . D 4 HOH A 134 434 72 HOH HOH . D 4 HOH A 135 435 70 HOH HOH . D 4 HOH A 136 436 201 HOH HOH . D 4 HOH A 137 437 69 HOH HOH . D 4 HOH A 138 438 208 HOH HOH . D 4 HOH A 139 439 65 HOH HOH . D 4 HOH A 140 440 60 HOH HOH . D 4 HOH A 141 441 101 HOH HOH . D 4 HOH A 142 442 16 HOH HOH . D 4 HOH A 143 443 160 HOH HOH . D 4 HOH A 144 444 134 HOH HOH . D 4 HOH A 145 445 205 HOH HOH . D 4 HOH A 146 446 123 HOH HOH . D 4 HOH A 147 447 6 HOH HOH . D 4 HOH A 148 448 52 HOH HOH . D 4 HOH A 149 449 62 HOH HOH . D 4 HOH A 150 450 14 HOH HOH . D 4 HOH A 151 451 105 HOH HOH . D 4 HOH A 152 452 56 HOH HOH . D 4 HOH A 153 453 217 HOH HOH . D 4 HOH A 154 454 67 HOH HOH . D 4 HOH A 155 455 213 HOH HOH . D 4 HOH A 156 456 49 HOH HOH . D 4 HOH A 157 457 187 HOH HOH . D 4 HOH A 158 458 75 HOH HOH . D 4 HOH A 159 459 125 HOH HOH . D 4 HOH A 160 460 228 HOH HOH . D 4 HOH A 161 461 15 HOH HOH . D 4 HOH A 162 462 143 HOH HOH . D 4 HOH A 163 463 112 HOH HOH . D 4 HOH A 164 464 218 HOH HOH . D 4 HOH A 165 465 104 HOH HOH . D 4 HOH A 166 466 165 HOH HOH . D 4 HOH A 167 467 80 HOH HOH . D 4 HOH A 168 468 107 HOH HOH . D 4 HOH A 169 469 245 HOH HOH . D 4 HOH A 170 470 159 HOH HOH . D 4 HOH A 171 471 154 HOH HOH . D 4 HOH A 172 472 247 HOH HOH . D 4 HOH A 173 473 186 HOH HOH . D 4 HOH A 174 474 225 HOH HOH . D 4 HOH A 175 475 211 HOH HOH . D 4 HOH A 176 476 188 HOH HOH . D 4 HOH A 177 477 147 HOH HOH . D 4 HOH A 178 478 133 HOH HOH . D 4 HOH A 179 479 223 HOH HOH . D 4 HOH A 180 480 191 HOH HOH . D 4 HOH A 181 481 229 HOH HOH . D 4 HOH A 182 482 146 HOH HOH . D 4 HOH A 183 483 157 HOH HOH . D 4 HOH A 184 484 138 HOH HOH . D 4 HOH A 185 485 207 HOH HOH . D 4 HOH A 186 486 214 HOH HOH . D 4 HOH A 187 487 215 HOH HOH . D 4 HOH A 188 488 153 HOH HOH . D 4 HOH A 189 489 252 HOH HOH . D 4 HOH A 190 490 161 HOH HOH . D 4 HOH A 191 491 248 HOH HOH . D 4 HOH A 192 492 135 HOH HOH . D 4 HOH A 193 493 150 HOH HOH . D 4 HOH A 194 494 243 HOH HOH . D 4 HOH A 195 495 240 HOH HOH . D 4 HOH A 196 496 190 HOH HOH . D 4 HOH A 197 497 251 HOH HOH . D 4 HOH A 198 498 253 HOH HOH . D 4 HOH A 199 499 68 HOH HOH . D 4 HOH A 200 500 171 HOH HOH . D 4 HOH A 201 501 189 HOH HOH . D 4 HOH A 202 502 128 HOH HOH . D 4 HOH A 203 503 99 HOH HOH . D 4 HOH A 204 504 239 HOH HOH . D 4 HOH A 205 505 121 HOH HOH . D 4 HOH A 206 506 136 HOH HOH . D 4 HOH A 207 507 221 HOH HOH . D 4 HOH A 208 508 92 HOH HOH . D 4 HOH A 209 509 169 HOH HOH . D 4 HOH A 210 510 21 HOH HOH . D 4 HOH A 211 511 256 HOH HOH . D 4 HOH A 212 512 61 HOH HOH . D 4 HOH A 213 513 36 HOH HOH . D 4 HOH A 214 514 236 HOH HOH . D 4 HOH A 215 515 166 HOH HOH . D 4 HOH A 216 516 254 HOH HOH . D 4 HOH A 217 517 106 HOH HOH . D 4 HOH A 218 518 145 HOH HOH . D 4 HOH A 219 519 110 HOH HOH . D 4 HOH A 220 520 55 HOH HOH . D 4 HOH A 221 521 79 HOH HOH . D 4 HOH A 222 522 237 HOH HOH . D 4 HOH A 223 523 124 HOH HOH . D 4 HOH A 224 524 230 HOH HOH . D 4 HOH A 225 525 174 HOH HOH . D 4 HOH A 226 526 129 HOH HOH . D 4 HOH A 227 527 118 HOH HOH . D 4 HOH A 228 528 102 HOH HOH . D 4 HOH A 229 529 210 HOH HOH . D 4 HOH A 230 530 192 HOH HOH . D 4 HOH A 231 531 250 HOH HOH . D 4 HOH A 232 532 156 HOH HOH . D 4 HOH A 233 533 172 HOH HOH . D 4 HOH A 234 534 177 HOH HOH . D 4 HOH A 235 535 139 HOH HOH . D 4 HOH A 236 536 144 HOH HOH . D 4 HOH A 237 537 244 HOH HOH . D 4 HOH A 238 538 204 HOH HOH . D 4 HOH A 239 539 98 HOH HOH . D 4 HOH A 240 540 203 HOH HOH . D 4 HOH A 241 541 140 HOH HOH . D 4 HOH A 242 542 113 HOH HOH . D 4 HOH A 243 543 119 HOH HOH . D 4 HOH A 244 544 155 HOH HOH . D 4 HOH A 245 545 50 HOH HOH . D 4 HOH A 246 546 83 HOH HOH . D 4 HOH A 247 547 97 HOH HOH . D 4 HOH A 248 548 117 HOH HOH . D 4 HOH A 249 549 168 HOH HOH . D 4 HOH A 250 550 126 HOH HOH . D 4 HOH A 251 551 141 HOH HOH . D 4 HOH A 252 552 170 HOH HOH . D 4 HOH A 253 553 241 HOH HOH . D 4 HOH A 254 554 246 HOH HOH . D 4 HOH A 255 555 234 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C13 P8W . . . B 2 27.14 50.697 -4.021 1 15.25 ? C13 P8W 201 A 1 HETATM 2 C C15 P8W . . . B 2 27.847 49.69 -4.656 1 14.59 ? C15 P8W 201 A 1 HETATM 3 C C17 P8W . . . B 2 29.12 49.376 -4.245 1 14.19 ? C17 P8W 201 A 1 HETATM 4 C C21 P8W . . . B 2 29.008 51.093 -2.544 1 15.06 ? C21 P8W 201 A 1 HETATM 5 C C22 P8W . . . B 2 29.713 51.832 -1.455 1 15.04 ? C22 P8W 201 A 1 HETATM 6 C C01 P8W . . . B 2 22.932 50.97 -1.682 1 14.72 ? C01 P8W 201 A 1 HETATM 7 C C05 P8W . . . B 2 24.115 50.453 -0.918 1 14 ? C05 P8W 201 A 1 HETATM 8 C C06 P8W . . . B 2 25.336 51.024 -1.005 1 14.17 ? C06 P8W 201 A 1 HETATM 9 N N07 P8W . . . B 2 25.572 52.075 -1.82 1 15.77 ? N07 P8W 201 A 1 HETATM 10 C C09 P8W . . . B 2 26.906 52.504 -2.278 1 15.25 ? C09 P8W 201 A 1 HETATM 11 C C12 P8W . . . B 2 27.7 51.414 -2.967 1 15.04 ? C12 P8W 201 A 1 HETATM 12 C C19 P8W . . . B 2 29.701 50.067 -3.197 1 14.86 ? C19 P8W 201 A 1 HETATM 13 C C23 P8W . . . B 2 29.979 53.195 -1.579 1 15.19 ? C23 P8W 201 A 1 HETATM 14 C C25 P8W . . . B 2 30.667 53.876 -0.588 1 15.07 ? C25 P8W 201 A 1 HETATM 15 C C27 P8W . . . B 2 31.104 53.213 0.535 1 16.08 ? C27 P8W 201 A 1 HETATM 16 C C29 P8W . . . B 2 30.872 51.862 0.664 1 15.41 ? C29 P8W 201 A 1 HETATM 17 C C31 P8W . . . B 2 30.197 51.171 -0.332 1 15.24 ? C31 P8W 201 A 1 HETATM 18 C C33 P8W . . . B 2 26.386 50.435 -0.232 1 14.84 ? C33 P8W 201 A 1 HETATM 19 N N35 P8W . . . B 2 26.246 49.42 0.542 1 15.14 ? N35 P8W 201 A 1 HETATM 20 N N36 P8W . . . B 2 24.998 48.866 0.608 1 14.31 ? N36 P8W 201 A 1 HETATM 21 C C37 P8W . . . B 2 24.894 47.695 1.474 1 14.57 ? C37 P8W 201 A 1 HETATM 22 C C41 P8W . . . B 2 23.888 49.303 -0.08 1 13.8 ? C41 P8W 201 A 1 HETATM 23 O O42 P8W . . . B 2 22.807 48.72 0.017 1 12.96 ? O42 P8W 201 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 28 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 347 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 23 #