data_6YT3
#
_model_server_result.job_id            gtOQnrm_KXLEI8a_xkBTAg 
_model_server_result.datetime_utc      '2024-11-28 18:27:53' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yt3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":302}' 
#
_entry.id    6YT3 
#
_exptl.entry_id    6YT3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              24.305 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MAGNESIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6YT3 
_cell.length_a            165.697 
_cell.length_b            165.697 
_cell.length_c            352.162 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YT3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        155 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'H 3 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 B SG CYS 34 B CYS 32 1_555 B SG CYS 37 B CYS 35 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? 
metalc ? metalc1 A OE2 GLU 190 A GLU 190 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.428 ? 
metalc ? metalc2 A O PRO 227 A PRO 227 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 ? 
metalc ? metalc3 C O2B ATP . A ATP 301 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.941 ? 
metalc ? metalc4 C O2A ATP . A ATP 301 1_555 D MG MG . A MG 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.214 ? 
#
_chem_comp.formula           'Mg 2' 
_chem_comp.formula_weight    24.305 
_chem_comp.id                MG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MAGNESIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6YT3 
_atom_sites.fract_transf_matrix[1][1]    0.006035 
_atom_sites.fract_transf_matrix[1][2]    0.003484 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006969 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00284 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 ATP A 1 301 281 ATP ATP . 
D 4 MG A 1 302 291 MG MG . 
E 3 ATP B 1 401 408 ATP ATP . 
F 5 HOH A 1 401 642 HOH HOH . 
F 5 HOH A 2 402 620 HOH HOH . 
F 5 HOH A 3 403 585 HOH HOH . 
F 5 HOH A 4 404 455 HOH HOH . 
F 5 HOH A 5 405 610 HOH HOH . 
F 5 HOH A 6 406 336 HOH HOH . 
F 5 HOH A 7 407 580 HOH HOH . 
F 5 HOH A 8 408 607 HOH HOH . 
F 5 HOH A 9 409 348 HOH HOH . 
F 5 HOH A 10 410 59 HOH HOH . 
F 5 HOH A 11 411 609 HOH HOH . 
F 5 HOH A 12 412 337 HOH HOH . 
F 5 HOH A 13 413 446 HOH HOH . 
F 5 HOH A 14 414 157 HOH HOH . 
F 5 HOH A 15 415 645 HOH HOH . 
F 5 HOH A 16 416 683 HOH HOH . 
F 5 HOH A 17 417 622 HOH HOH . 
F 5 HOH A 18 418 603 HOH HOH . 
F 5 HOH A 19 419 613 HOH HOH . 
F 5 HOH A 20 420 657 HOH HOH . 
F 5 HOH A 21 421 719 HOH HOH . 
F 5 HOH A 22 422 448 HOH HOH . 
F 5 HOH A 23 423 605 HOH HOH . 
F 5 HOH A 24 424 519 HOH HOH . 
F 5 HOH A 25 425 639 HOH HOH . 
F 5 HOH A 26 426 736 HOH HOH . 
F 5 HOH A 27 427 587 HOH HOH . 
F 5 HOH A 28 428 662 HOH HOH . 
F 5 HOH A 29 429 757 HOH HOH . 
F 5 HOH A 30 430 425 HOH HOH . 
F 5 HOH A 31 431 644 HOH HOH . 
F 5 HOH A 32 432 614 HOH HOH . 
F 5 HOH A 33 433 665 HOH HOH . 
F 5 HOH A 34 434 626 HOH HOH . 
F 5 HOH A 35 435 268 HOH HOH . 
F 5 HOH A 36 436 153 HOH HOH . 
F 5 HOH A 37 437 637 HOH HOH . 
F 5 HOH A 38 438 518 HOH HOH . 
F 5 HOH A 39 439 596 HOH HOH . 
F 5 HOH A 40 440 600 HOH HOH . 
F 5 HOH A 41 441 721 HOH HOH . 
F 5 HOH A 42 442 594 HOH HOH . 
F 5 HOH A 43 443 195 HOH HOH . 
F 5 HOH A 44 444 595 HOH HOH . 
F 5 HOH A 45 445 616 HOH HOH . 
F 5 HOH A 46 446 618 HOH HOH . 
F 5 HOH A 47 447 755 HOH HOH . 
F 5 HOH A 48 448 130 HOH HOH . 
F 5 HOH A 49 449 601 HOH HOH . 
F 5 HOH A 50 450 522 HOH HOH . 
F 5 HOH A 51 451 101 HOH HOH . 
F 5 HOH A 52 452 89 HOH HOH . 
F 5 HOH A 53 453 638 HOH HOH . 
F 5 HOH A 54 454 712 HOH HOH . 
F 5 HOH A 55 455 517 HOH HOH . 
F 5 HOH A 56 456 675 HOH HOH . 
F 5 HOH A 57 457 707 HOH HOH . 
F 5 HOH A 58 458 274 HOH HOH . 
F 5 HOH A 59 459 581 HOH HOH . 
F 5 HOH A 60 460 472 HOH HOH . 
F 5 HOH A 61 461 711 HOH HOH . 
F 5 HOH A 62 462 643 HOH HOH . 
F 5 HOH A 63 463 703 HOH HOH . 
F 5 HOH A 64 464 751 HOH HOH . 
F 5 HOH A 65 465 734 HOH HOH . 
F 5 HOH A 66 466 604 HOH HOH . 
F 5 HOH A 67 467 659 HOH HOH . 
F 5 HOH A 68 468 709 HOH HOH . 
F 5 HOH A 69 469 706 HOH HOH . 
F 5 HOH A 70 470 23 HOH HOH . 
F 5 HOH A 71 471 358 HOH HOH . 
F 5 HOH A 72 472 647 HOH HOH . 
F 5 HOH A 73 473 641 HOH HOH . 
F 5 HOH A 74 474 461 HOH HOH . 
F 5 HOH A 75 475 646 HOH HOH . 
F 5 HOH A 76 476 648 HOH HOH . 
F 5 HOH A 77 477 724 HOH HOH . 
F 5 HOH A 78 478 479 HOH HOH . 
F 5 HOH A 79 479 237 HOH HOH . 
F 5 HOH A 80 480 765 HOH HOH . 
F 5 HOH A 81 481 710 HOH HOH . 
F 5 HOH A 82 482 731 HOH HOH . 
F 5 HOH A 83 483 702 HOH HOH . 
F 5 HOH A 84 484 685 HOH HOH . 
F 5 HOH A 85 485 684 HOH HOH . 
F 5 HOH A 86 486 68 HOH HOH . 
F 5 HOH A 87 487 623 HOH HOH . 
F 5 HOH A 88 488 608 HOH HOH . 
F 5 HOH A 89 489 725 HOH HOH . 
F 5 HOH A 90 490 759 HOH HOH . 
F 5 HOH A 91 491 553 HOH HOH . 
F 5 HOH A 92 492 357 HOH HOH . 
F 5 HOH A 93 493 565 HOH HOH . 
F 5 HOH A 94 494 708 HOH HOH . 
F 5 HOH A 95 495 673 HOH HOH . 
F 5 HOH A 96 496 758 HOH HOH . 
F 5 HOH A 97 497 722 HOH HOH . 
F 5 HOH A 98 498 677 HOH HOH . 
F 5 HOH A 99 499 723 HOH HOH . 
F 5 HOH A 100 500 663 HOH HOH . 
G 5 HOH B 1 501 573 HOH HOH . 
G 5 HOH B 2 502 629 HOH HOH . 
G 5 HOH B 3 503 574 HOH HOH . 
G 5 HOH B 4 504 583 HOH HOH . 
G 5 HOH B 5 505 640 HOH HOH . 
G 5 HOH B 6 506 760 HOH HOH . 
G 5 HOH B 7 507 80 HOH HOH . 
G 5 HOH B 8 508 635 HOH HOH . 
G 5 HOH B 9 509 729 HOH HOH . 
G 5 HOH B 10 510 762 HOH HOH . 
G 5 HOH B 11 511 742 HOH HOH . 
G 5 HOH B 12 512 732 HOH HOH . 
G 5 HOH B 13 513 630 HOH HOH . 
G 5 HOH B 14 514 625 HOH HOH . 
G 5 HOH B 15 515 692 HOH HOH . 
G 5 HOH B 16 516 571 HOH HOH . 
G 5 HOH B 17 517 705 HOH HOH . 
G 5 HOH B 18 518 696 HOH HOH . 
G 5 HOH B 19 519 588 HOH HOH . 
G 5 HOH B 20 520 166 HOH HOH . 
G 5 HOH B 21 521 691 HOH HOH . 
G 5 HOH B 22 522 393 HOH HOH . 
G 5 HOH B 23 523 172 HOH HOH . 
G 5 HOH B 24 524 752 HOH HOH . 
G 5 HOH B 25 525 667 HOH HOH . 
G 5 HOH B 26 526 726 HOH HOH . 
G 5 HOH B 27 527 690 HOH HOH . 
G 5 HOH B 28 528 653 HOH HOH . 
G 5 HOH B 29 529 593 HOH HOH . 
G 5 HOH B 30 530 689 HOH HOH . 
G 5 HOH B 31 531 745 HOH HOH . 
G 5 HOH B 32 532 60 HOH HOH . 
G 5 HOH B 33 533 676 HOH HOH . 
G 5 HOH B 34 534 654 HOH HOH . 
G 5 HOH B 35 535 737 HOH HOH . 
G 5 HOH B 36 536 756 HOH HOH . 
G 5 HOH B 37 537 747 HOH HOH . 
G 5 HOH B 38 538 353 HOH HOH . 
G 5 HOH B 39 539 591 HOH HOH . 
G 5 HOH B 40 540 668 HOH HOH . 
G 5 HOH B 41 541 744 HOH HOH . 
G 5 HOH B 42 542 636 HOH HOH . 
G 5 HOH B 43 543 579 HOH HOH . 
G 5 HOH B 44 544 628 HOH HOH . 
G 5 HOH B 45 545 129 HOH HOH . 
G 5 HOH B 46 546 655 HOH HOH . 
G 5 HOH B 47 547 693 HOH HOH . 
G 5 HOH B 48 548 631 HOH HOH . 
G 5 HOH B 49 549 740 HOH HOH . 
G 5 HOH B 50 550 670 HOH HOH . 
G 5 HOH B 51 551 694 HOH HOH . 
G 5 HOH B 52 552 570 HOH HOH . 
G 5 HOH B 53 553 739 HOH HOH . 
G 5 HOH B 54 554 687 HOH HOH . 
G 5 HOH B 55 555 572 HOH HOH . 
G 5 HOH B 56 556 748 HOH HOH . 
G 5 HOH B 57 557 767 HOH HOH . 
G 5 HOH B 58 558 699 HOH HOH . 
G 5 HOH B 59 559 754 HOH HOH . 
G 5 HOH B 60 560 669 HOH HOH . 
G 5 HOH B 61 561 634 HOH HOH . 
G 5 HOH B 62 562 236 HOH HOH . 
G 5 HOH B 63 563 577 HOH HOH . 
G 5 HOH B 64 564 678 HOH HOH . 
G 5 HOH B 65 565 764 HOH HOH . 
G 5 HOH B 66 566 714 HOH HOH . 
G 5 HOH B 67 567 715 HOH HOH . 
G 5 HOH B 68 568 569 HOH HOH . 
G 5 HOH B 69 569 568 HOH HOH . 
G 5 HOH B 70 570 566 HOH HOH . 
G 5 HOH B 71 571 575 HOH HOH . 
G 5 HOH B 72 572 679 HOH HOH . 
G 5 HOH B 73 573 697 HOH HOH . 
G 5 HOH B 74 574 650 HOH HOH . 
G 5 HOH B 75 575 270 HOH HOH . 
G 5 HOH B 76 576 590 HOH HOH . 
G 5 HOH B 77 577 728 HOH HOH . 
G 5 HOH B 78 578 718 HOH HOH . 
G 5 HOH B 79 579 652 HOH HOH . 
G 5 HOH B 80 580 766 HOH HOH . 
G 5 HOH B 81 581 664 HOH HOH . 
G 5 HOH B 82 582 713 HOH HOH . 
G 5 HOH B 83 583 763 HOH HOH . 
G 5 HOH B 84 584 688 HOH HOH . 
G 5 HOH B 85 585 567 HOH HOH . 
G 5 HOH B 86 586 137 HOH HOH . 
G 5 HOH B 87 587 651 HOH HOH . 
G 5 HOH B 88 588 727 HOH HOH . 
G 5 HOH B 89 589 611 HOH HOH . 
G 5 HOH B 90 590 222 HOH HOH . 
G 5 HOH B 91 591 598 HOH HOH . 
G 5 HOH B 92 592 681 HOH HOH . 
G 5 HOH B 93 593 576 HOH HOH . 
G 5 HOH B 94 594 682 HOH HOH . 
G 5 HOH B 95 595 599 HOH HOH . 
G 5 HOH B 96 596 656 HOH HOH . 
G 5 HOH B 97 597 768 HOH HOH . 
G 5 HOH B 98 598 592 HOH HOH . 
G 5 HOH B 99 599 372 HOH HOH . 
G 5 HOH B 100 600 761 HOH HOH . 
G 5 HOH B 101 601 686 HOH HOH . 
G 5 HOH B 102 602 750 HOH HOH . 
G 5 HOH B 103 603 671 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MG 
_atom_site.label_atom_id         MG 
_atom_site.label_comp_id         MG 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               76.527 
_atom_site.Cartn_y               -18.426 
_atom_site.Cartn_z               38.295 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        47.55 
_atom_site.pdbx_formal_charge    2 
_atom_site.auth_atom_id          MG 
_atom_site.auth_comp_id          MG 
_atom_site.auth_seq_id           302 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              80 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           304 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#