data_6YU3
#
_model_server_result.job_id            cIEYmGj2gXfXSvDl62yCHQ 
_model_server_result.datetime_utc      '2024-11-22 17:49:51' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yu3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":703}' 
#
_entry.id    6YU3 
#
_exptl.entry_id    6YU3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              165.189 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHENYLALANINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          96.76 
_cell.angle_gamma         90 
_cell.entry_id            6YU3 
_cell.length_a            44.28 
_cell.length_b            49.89 
_cell.length_c            110.05 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YU3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        3 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A O GLY 26 A GLY 24 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.156 ? 
metalc ? metalc2 A O ALA 28 A ALA 26 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? 
metalc ? metalc3 A O VAL 29 A VAL 27 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.265 ? 
metalc ? metalc4 A OD1 ASN 33 A ASN 31 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.395 ? 
metalc ? metalc5 A O THR 233 A THR 231 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.444 ? 
metalc ? metalc6 A OG1 THR 233 A THR 231 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.401 ? 
metalc ? metalc7 A OD1 ASP 265 A ASP 263 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.402 ? 
metalc ? metalc8 A O ALA 322 A ALA 320 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? 
metalc ? metalc9 A OG SER 325 A SER 323 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.41 ? 
metalc ? metalc10 A OG SER 326 A SER 324 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.442 ? 
metalc ? metalc11 B NA NA . A NA 701 1_555 L O HOH . A HOH 818 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.651 ? 
metalc ? metalc12 C NA NA . A NA 702 1_555 D OXT PHE . A PHE 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? 
#
_chem_comp.formula           'C9 H11 N O2' 
_chem_comp.formula_weight    165.189 
_chem_comp.id                PHE 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              PHENYLALANINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA PHE sing 298 n n 
N H PHE sing 299 n n 
N H2 PHE sing 300 n n 
CA C PHE sing 301 n n 
CA CB PHE sing 302 n n 
CA HA PHE sing 303 n n 
C O PHE doub 304 n n 
C OXT PHE sing 305 n n 
CB CG PHE sing 306 n n 
CB HB2 PHE sing 307 n n 
CB HB3 PHE sing 308 n n 
CG CD1 PHE doub 309 n y 
CG CD2 PHE sing 310 n y 
CD1 CE1 PHE sing 311 n y 
CD1 HD1 PHE sing 312 n n 
CD2 CE2 PHE doub 313 n y 
CD2 HD2 PHE sing 314 n n 
CE1 CZ PHE doub 315 n y 
CE1 HE1 PHE sing 316 n n 
CE2 CZ PHE sing 317 n y 
CE2 HE2 PHE sing 318 n n 
CZ HZ PHE sing 319 n n 
OXT HXT PHE sing 320 n n 
#
_atom_sites.entry_id                     6YU3 
_atom_sites.fract_transf_matrix[1][1]    0.022584 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002677 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.020044 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00915 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 NA A 1 701 701 NA NA . 
C 2 NA A 1 702 702 NA NA . 
D 3 PHE A 1 703 601 PHE PHE . 
E 4 LMT A 1 704 801 LMT LMT . 
F 4 LMT A 1 705 901 LMT LMT . 
G 4 LMT A 1 706 1001 LMT LMT . 
H 4 LMT A 1 707 1201 LMT LMT . 
I 5 SOG A 1 708 1 SOG SOG . 
J 5 SOG A 1 709 2 SOG SOG . 
K 6 GOL A 1 710 1 GOL GOL . 
L 7 HOH A 1 801 44 HOH HOH . 
L 7 HOH A 2 802 59 HOH HOH . 
L 7 HOH A 3 803 2 HOH HOH . 
L 7 HOH A 4 804 37 HOH HOH . 
L 7 HOH A 5 805 62 HOH HOH . 
L 7 HOH A 6 806 16 HOH HOH . 
L 7 HOH A 7 807 43 HOH HOH . 
L 7 HOH A 8 808 18 HOH HOH . 
L 7 HOH A 9 809 23 HOH HOH . 
L 7 HOH A 10 810 10 HOH HOH . 
L 7 HOH A 11 811 32 HOH HOH . 
L 7 HOH A 12 812 48 HOH HOH . 
L 7 HOH A 13 813 24 HOH HOH . 
L 7 HOH A 14 814 34 HOH HOH . 
L 7 HOH A 15 815 13 HOH HOH . 
L 7 HOH A 16 816 9 HOH HOH . 
L 7 HOH A 17 817 26 HOH HOH . 
L 7 HOH A 18 818 54 HOH HOH . 
L 7 HOH A 19 819 36 HOH HOH . 
L 7 HOH A 20 820 22 HOH HOH . 
L 7 HOH A 21 821 50 HOH HOH . 
L 7 HOH A 22 822 20 HOH HOH . 
L 7 HOH A 23 823 1 HOH HOH . 
L 7 HOH A 24 824 40 HOH HOH . 
L 7 HOH A 25 825 21 HOH HOH . 
L 7 HOH A 26 826 7 HOH HOH . 
L 7 HOH A 27 827 30 HOH HOH . 
L 7 HOH A 28 828 14 HOH HOH . 
L 7 HOH A 29 829 60 HOH HOH . 
L 7 HOH A 30 830 63 HOH HOH . 
L 7 HOH A 31 831 33 HOH HOH . 
L 7 HOH A 32 832 64 HOH HOH . 
L 7 HOH A 33 833 29 HOH HOH . 
L 7 HOH A 34 834 31 HOH HOH . 
L 7 HOH A 35 835 11 HOH HOH . 
L 7 HOH A 36 836 27 HOH HOH . 
L 7 HOH A 37 837 4 HOH HOH . 
L 7 HOH A 38 838 3 HOH HOH . 
L 7 HOH A 39 839 25 HOH HOH . 
L 7 HOH A 40 840 47 HOH HOH . 
L 7 HOH A 41 841 56 HOH HOH . 
L 7 HOH A 42 842 53 HOH HOH . 
L 7 HOH A 43 843 8 HOH HOH . 
L 7 HOH A 44 844 28 HOH HOH . 
L 7 HOH A 45 845 5 HOH HOH . 
L 7 HOH A 46 846 15 HOH HOH . 
L 7 HOH A 47 847 6 HOH HOH . 
L 7 HOH A 48 848 35 HOH HOH . 
L 7 HOH A 49 849 57 HOH HOH . 
L 7 HOH A 50 850 49 HOH HOH . 
L 7 HOH A 51 851 51 HOH HOH . 
L 7 HOH A 52 852 61 HOH HOH . 
L 7 HOH A 53 853 12 HOH HOH . 
L 7 HOH A 54 854 55 HOH HOH . 
L 7 HOH A 55 855 52 HOH HOH . 
L 7 HOH A 56 856 39 HOH HOH . 
L 7 HOH A 57 857 19 HOH HOH . 
L 7 HOH A 58 858 58 HOH HOH . 
L 7 HOH A 59 859 65 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N PHE . . . D 3 40.304 22.956 137.232 1 30.49 ? N PHE 703 A 1 
HETATM 2 C CA PHE . . . D 3 39.59 23.529 136.13 1 33.51 ? CA PHE 703 A 1 
HETATM 3 C C PHE . . . D 3 40.388 24.69 135.528 1 30.75 ? C PHE 703 A 1 
HETATM 4 O O PHE . . . D 3 40.134 25.094 134.35 1 34.55 ? O PHE 703 A 1 
HETATM 5 C CB PHE . . . D 3 38.191 24.021 136.585 1 31.57 ? CB PHE 703 A 1 
HETATM 6 C CG PHE . . . D 3 37.404 22.852 137.279 1 29.8 ? CG PHE 703 A 1 
HETATM 7 C CD1 PHE . . . D 3 37.306 21.61 136.655 1 32.14 ? CD1 PHE 703 A 1 
HETATM 8 C CD2 PHE . . . D 3 36.792 23.06 138.52 1 35.96 ? CD2 PHE 703 A 1 
HETATM 9 C CE1 PHE . . . D 3 36.606 20.579 137.267 1 28.9 ? CE1 PHE 703 A 1 
HETATM 10 C CE2 PHE . . . D 3 36.093 22.031 139.127 1 30.34 ? CE2 PHE 703 A 1 
HETATM 11 C CZ PHE . . . D 3 35.999 20.782 138.503 1 32.77 ? CZ PHE 703 A 1 
HETATM 12 O OXT PHE . . . D 3 41.304 25.256 136.199 1 31.15 -1 OXT PHE 703 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           12 
#