data_6YU4 # _model_server_result.job_id bjYzlTOt6yV-8tcmDsJmpQ _model_server_result.datetime_utc '2024-10-14 07:27:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yu4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":703}' # _entry.id 6YU4 # _exptl.entry_id 6YU4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 183.18 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-FLUORO-L-PHENYLALANINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.08 _cell.angle_gamma 90 _cell.entry_id 6YU4 _cell.length_a 44.15 _cell.length_b 49.85 _cell.length_c 109.73 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YU4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 3 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O GLY 26 A GLY 24 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc2 A O ALA 28 A ALA 26 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc3 A O VAL 29 A VAL 27 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc4 A OD1 ASN 33 A ASN 31 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? metalc ? metalc5 A O THR 233 A THR 231 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.602 ? metalc ? metalc6 A OG1 THR 233 A THR 231 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc7 A OD1 ASP 265 A ASP 263 1_555 C NA NA . A NA 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.553 ? metalc ? metalc8 A O ALA 322 A ALA 320 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? metalc ? metalc9 A OG SER 325 A SER 323 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.514 ? metalc ? metalc10 A OG SER 326 A SER 324 1_555 B NA NA . A NA 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.372 ? metalc ? metalc11 B NA NA . A NA 701 1_555 N O HOH . A HOH 814 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.758 ? metalc ? metalc12 C NA NA . A NA 702 1_555 D OXT PFF . A PFF 703 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? # _chem_comp.formula 'C9 H10 F N O2' _chem_comp.formula_weight 183.18 _chem_comp.id PFF _chem_comp.mon_nstd_flag n _chem_comp.name 4-FLUORO-L-PHENYLALANINE _chem_comp.type 'l-peptide linking' _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N CA PFF sing 423 n n N H PFF sing 424 n n N H2 PFF sing 425 n n CA C PFF sing 426 n n CA CB PFF sing 427 n n CA HA PFF sing 428 n n C O PFF doub 429 n n C OXT PFF sing 430 n n OXT HXT PFF sing 431 n n CB CG PFF sing 432 n n CB HB2 PFF sing 433 n n CB HB3 PFF sing 434 n n CG CD1 PFF doub 435 n y CG CD2 PFF sing 436 n y CD1 CE1 PFF sing 437 n y CD1 HD1 PFF sing 438 n n CD2 CE2 PFF doub 439 n y CD2 HD2 PFF sing 440 n n CE1 CZ PFF doub 441 n y CE1 HE1 PFF sing 442 n n CE2 CZ PFF sing 443 n y CE2 HE2 PFF sing 444 n n CZ F PFF sing 445 n n # _atom_sites.entry_id 6YU4 _atom_sites.fract_transf_matrix[1][1] 0.02265 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002412 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02006 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009165 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 701 701 NA NA . C 2 NA A 1 702 702 NA NA . D 3 PFF A 1 703 601 PFF PFF . E 4 PCW A 1 704 801 PCW PCW . F 5 LMT A 1 705 1453 LMT LMT . G 5 LMT A 1 706 1454 LMT LMT . H 5 LMT A 1 707 1455 LMT LMT . I 5 LMT A 1 708 1456 LMT LMT . J 6 SOG A 1 709 1452 SOG SOG . K 6 SOG A 1 710 1453 SOG SOG . L 5 LMT A 1 711 1 LMT LMT . M 5 LMT A 1 712 2 LMT LMT . N 7 HOH A 1 801 36 HOH HOH . N 7 HOH A 2 802 11 HOH HOH . N 7 HOH A 3 803 34 HOH HOH . N 7 HOH A 4 804 12 HOH HOH . N 7 HOH A 5 805 3 HOH HOH . N 7 HOH A 6 806 18 HOH HOH . N 7 HOH A 7 807 1 HOH HOH . N 7 HOH A 8 808 30 HOH HOH . N 7 HOH A 9 809 5 HOH HOH . N 7 HOH A 10 810 26 HOH HOH . N 7 HOH A 11 811 6 HOH HOH . N 7 HOH A 12 812 20 HOH HOH . N 7 HOH A 13 813 13 HOH HOH . N 7 HOH A 14 814 38 HOH HOH . N 7 HOH A 15 815 22 HOH HOH . N 7 HOH A 16 816 8 HOH HOH . N 7 HOH A 17 817 9 HOH HOH . N 7 HOH A 18 818 10 HOH HOH . N 7 HOH A 19 819 27 HOH HOH . N 7 HOH A 20 820 29 HOH HOH . N 7 HOH A 21 821 21 HOH HOH . N 7 HOH A 22 822 7 HOH HOH . N 7 HOH A 23 823 33 HOH HOH . N 7 HOH A 24 824 17 HOH HOH . N 7 HOH A 25 825 23 HOH HOH . N 7 HOH A 26 826 31 HOH HOH . N 7 HOH A 27 827 35 HOH HOH . N 7 HOH A 28 828 16 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N PFF . . . D 3 41.628 26.076 137.122 1 22.6 ? N PFF 703 A 1 HETATM 2 C CA PFF . . . D 3 41.057 26.578 135.882 1 23.55 ? CA PFF 703 A 1 HETATM 3 C C PFF . . . D 3 41.862 27.774 135.378 1 23.03 ? C PFF 703 A 1 HETATM 4 O O PFF . . . D 3 41.615 28.253 134.241 1 26.04 ? O PFF 703 A 1 HETATM 5 O OXT PFF . . . D 3 42.768 28.28 136.092 1 26.5 -1 OXT PFF 703 A 1 HETATM 6 C CB PFF . . . D 3 39.593 26.979 136.079 1 28.54 ? CB PFF 703 A 1 HETATM 7 C CG PFF . . . D 3 38.843 25.897 136.854 1 26.56 ? CG PFF 703 A 1 HETATM 8 C CD1 PFF . . . D 3 38.672 24.634 136.307 1 27.26 ? CD1 PFF 703 A 1 HETATM 9 C CD2 PFF . . . D 3 38.325 26.188 138.106 1 34.17 ? CD2 PFF 703 A 1 HETATM 10 C CE1 PFF . . . D 3 37.988 23.661 137.018 1 30.88 ? CE1 PFF 703 A 1 HETATM 11 C CE2 PFF . . . D 3 37.641 25.217 138.816 1 33 ? CE2 PFF 703 A 1 HETATM 12 C CZ PFF . . . D 3 37.473 23.953 138.272 1 34.23 ? CZ PFF 703 A 1 HETATM 13 F F PFF . . . D 3 36.796 23.003 138.975 1 37.18 ? F PFF 703 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 13 #