data_6YUA
#
_model_server_result.job_id            z3pae5b41jk-7Xys-s6ULQ 
_model_server_result.datetime_utc      '2024-10-12 14:29:22' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yua 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":703}' 
#
_entry.id    6YUA 
#
_exptl.entry_id    6YUA 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              410.333 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FE(4)-NI(1)-S(4) CLUSTER' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6YUA 
_cell.length_a            89.333 
_cell.length_b            89.333 
_cell.length_c            527.13 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YUA 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        92 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 H N N 
? 5 M N N 
#
_struct_conn.conn_type_id                   metalc 
_struct_conn.details                        ? 
_struct_conn.id                             metalc1 
_struct_conn.ptnr1_label_asym_id            C 
_struct_conn.ptnr1_label_atom_id            NE2 
_struct_conn.ptnr1_label_comp_id            HIS 
_struct_conn.ptnr1_label_seq_id             259 
_struct_conn.ptnr1_auth_asym_id             C 
_struct_conn.ptnr1_auth_comp_id             HIS 
_struct_conn.ptnr1_auth_seq_id              259 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            M 
_struct_conn.ptnr2_label_atom_id            FE2 
_struct_conn.ptnr2_label_comp_id            XCC 
_struct_conn.ptnr2_label_seq_id             . 
_struct_conn.ptnr2_auth_asym_id             C 
_struct_conn.ptnr2_auth_comp_id             XCC 
_struct_conn.ptnr2_auth_seq_id              704 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.638 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'Fe4 Ni S4' 
_chem_comp.formula_weight    410.333 
_chem_comp.id                XCC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FE(4)-NI(1)-S(4) CLUSTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'C CLUSTER' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
FE1 S2 XCC sing 408 n n 
FE1 S4 XCC sing 409 n n 
FE1 S3 XCC sing 410 n n 
FE2 S3 XCC sing 411 n n 
FE3 S1 XCC sing 412 n n 
FE3 S2 XCC sing 413 n n 
FE3 S4 XCC sing 414 n n 
FE4 S1 XCC sing 415 n n 
FE4 S2 XCC sing 416 n n 
FE4 S3 XCC sing 417 n n 
S1 NI XCC sing 418 n n 
#
_atom_sites.entry_id                     6YUA 
_atom_sites.fract_transf_matrix[1][1]    0.011194 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011194 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.001897 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 3 MG A 1 401 4 MG MG . 
F 4 SF4 B 1 701 1104 SF4 SF4 . 
G 4 SF4 B 1 702 1105 SF4 SF4 . 
H 5 XCC B 1 703 802 XCC XCC . 
I 3 MG B 1 704 2 MG MG . 
J 6 GOL C 1 701 701 GOL GOL . 
K 6 GOL C 1 702 801 GOL GOL . 
L 4 SF4 C 1 703 1103 SF4 SF4 . 
M 5 XCC C 1 704 803 XCC XCC . 
N 3 MG C 1 705 1 MG MG . 
O 3 MG C 1 706 3 MG MG . 
P 7 EDO D 1 401 301 EDO EDO . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 FE FE1 XCC . . . H 5 -29.71 20.544 -31.878 1 109.79 ? FE1 XCC 703 B 1 
HETATM 2 FE FE2 XCC . . . H 5 -26.438 19.307 -31.228 1 109.91 ? FE2 XCC 703 B 1 
HETATM 3 FE FE3 XCC . . . H 5 -30.823 18.661 -29.561 1 104.35 ? FE3 XCC 703 B 1 
HETATM 4 FE FE4 XCC . . . H 5 -28.542 20.895 -28.81 1 106.67 ? FE4 XCC 703 B 1 
HETATM 5 S S1 XCC . . . H 5 -28.922 18.799 -28.618 1 104.01 ? S1 XCC 703 B 1 
HETATM 6 S S2 XCC . . . H 5 -30.327 20.655 -29.889 1 105.38 ? S2 XCC 703 B 1 
HETATM 7 S S4 XCC . . . H 5 -29.697 18.332 -31.47 1 57.16 ? S4 XCC 703 B 1 
HETATM 8 S S3 XCC . . . H 5 -27.868 20.843 -30.838 1 107.56 ? S3 XCC 703 B 1 
HETATM 9 NI NI XCC . . . H 5 -27.468 17.387 -29.698 1 152.53 ? NI XCC 703 B 1 
#
_model_server_stats.io_time_ms              34 
_model_server_stats.parse_time_ms           15 
_model_server_stats.create_model_time_ms    15 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           9 
#