data_6YUB
#
_model_server_result.job_id            beZEq6ahbdO1093CyfJyEQ 
_model_server_result.datetime_utc      '2024-11-20 01:23:20' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yub 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"E","auth_seq_id":401}' 
#
_entry.id    6YUB 
#
_exptl.entry_id    6YUB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              65.409 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'ZINC ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          106.36 
_cell.angle_gamma         90 
_cell.entry_id            6YUB 
_cell.length_a            64.75 
_cell.length_b            74.17 
_cell.length_c            103.66 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YUB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        4 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1 21 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,D,E,F,G 1 1 
C,H 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 183 A CYS 185 1_555 D ZN ZN . A ZN 501 1_555 ? 4 ? ? ? ? ? ? ? ? ? ? 2.37 ? 
metalc ? metalc2 A SG CYS 186 A CYS 188 1_555 D ZN ZN . A ZN 501 1_555 ? 3 ? ? ? ? ? ? ? ? ? ? 2.26 ? 
metalc ? metalc3 A SG CYS 278 A CYS 280 1_555 D ZN ZN . A ZN 501 1_555 ? 2 ? ? ? ? ? ? ? ? ? ? 2.328 ? 
metalc ? metalc4 A SG CYS 281 A CYS 283 1_555 D ZN ZN . A ZN 501 1_555 ? 1 ? ? ? ? ? ? ? ? ? ? 2.268 ? 
metalc ? metalc5 B SG CYS 184 B CYS 185 1_555 E ZN ZN . B ZN 401 1_555 ? 3 ? ? ? ? ? ? ? ? ? ? 2.303 ? 
metalc ? metalc6 B SG CYS 187 B CYS 188 1_555 E ZN ZN . B ZN 401 1_555 ? 5 ? ? ? ? ? ? ? ? ? ? 2.313 ? 
metalc ? metalc7 B SG CYS 279 B CYS 280 1_555 E ZN ZN . B ZN 401 1_555 ? 2 ? ? ? ? ? ? ? ? ? ? 2.337 ? 
metalc ? metalc8 B SG CYS 282 B CYS 283 1_555 E ZN ZN . B ZN 401 1_555 ? 1 ? ? ? ? ? ? ? ? ? ? 2.205 ? 
#
_chem_comp.formula           'Zn 2' 
_chem_comp.formula_weight    65.409 
_chem_comp.id                ZN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'ZINC ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6YUB 
_atom_sites.fract_transf_matrix[1][1]    0.015444 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004532 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013483 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010054 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 4 ZN A 1 501 1 ZN ZN . 
E 4 ZN B 1 401 2 ZN ZN . 
F 5 HOH A 1 601 186 HOH HOH . 
F 5 HOH A 2 602 124 HOH HOH . 
F 5 HOH A 3 603 64 HOH HOH . 
F 5 HOH A 4 604 135 HOH HOH . 
F 5 HOH A 5 605 29 HOH HOH . 
F 5 HOH A 6 606 17 HOH HOH . 
F 5 HOH A 7 607 86 HOH HOH . 
F 5 HOH A 8 608 62 HOH HOH . 
F 5 HOH A 9 609 36 HOH HOH . 
F 5 HOH A 10 610 6 HOH HOH . 
F 5 HOH A 11 611 52 HOH HOH . 
F 5 HOH A 12 612 144 HOH HOH . 
F 5 HOH A 13 613 8 HOH HOH . 
F 5 HOH A 14 614 184 HOH HOH . 
F 5 HOH A 15 615 156 HOH HOH . 
F 5 HOH A 16 616 165 HOH HOH . 
F 5 HOH A 17 617 25 HOH HOH . 
F 5 HOH A 18 618 115 HOH HOH . 
F 5 HOH A 19 619 208 HOH HOH . 
F 5 HOH A 20 620 82 HOH HOH . 
F 5 HOH A 21 621 77 HOH HOH . 
F 5 HOH A 22 622 91 HOH HOH . 
F 5 HOH A 23 623 141 HOH HOH . 
F 5 HOH A 24 624 136 HOH HOH . 
F 5 HOH A 25 625 217 HOH HOH . 
F 5 HOH A 26 626 68 HOH HOH . 
F 5 HOH A 27 627 70 HOH HOH . 
F 5 HOH A 28 628 223 HOH HOH . 
F 5 HOH A 29 629 74 HOH HOH . 
F 5 HOH A 30 630 84 HOH HOH . 
F 5 HOH A 31 631 38 HOH HOH . 
F 5 HOH A 32 632 108 HOH HOH . 
F 5 HOH A 33 633 72 HOH HOH . 
F 5 HOH A 34 634 142 HOH HOH . 
F 5 HOH A 35 635 39 HOH HOH . 
F 5 HOH A 36 636 134 HOH HOH . 
F 5 HOH A 37 637 10 HOH HOH . 
F 5 HOH A 38 638 104 HOH HOH . 
F 5 HOH A 39 639 201 HOH HOH . 
F 5 HOH A 40 640 114 HOH HOH . 
F 5 HOH A 41 641 133 HOH HOH . 
F 5 HOH A 42 642 40 HOH HOH . 
F 5 HOH A 43 643 102 HOH HOH . 
F 5 HOH A 44 644 100 HOH HOH . 
F 5 HOH A 45 645 22 HOH HOH . 
F 5 HOH A 46 646 42 HOH HOH . 
F 5 HOH A 47 647 175 HOH HOH . 
F 5 HOH A 48 648 88 HOH HOH . 
F 5 HOH A 49 649 118 HOH HOH . 
F 5 HOH A 50 650 18 HOH HOH . 
F 5 HOH A 51 651 60 HOH HOH . 
F 5 HOH A 52 652 43 HOH HOH . 
F 5 HOH A 53 653 61 HOH HOH . 
F 5 HOH A 54 654 92 HOH HOH . 
F 5 HOH A 55 655 32 HOH HOH . 
F 5 HOH A 56 656 75 HOH HOH . 
F 5 HOH A 57 657 105 HOH HOH . 
F 5 HOH A 58 658 202 HOH HOH . 
F 5 HOH A 59 659 122 HOH HOH . 
F 5 HOH A 60 660 54 HOH HOH . 
F 5 HOH A 61 661 227 HOH HOH . 
F 5 HOH A 62 662 81 HOH HOH . 
F 5 HOH A 63 663 166 HOH HOH . 
F 5 HOH A 64 664 94 HOH HOH . 
F 5 HOH A 65 665 73 HOH HOH . 
F 5 HOH A 66 666 97 HOH HOH . 
F 5 HOH A 67 667 171 HOH HOH . 
F 5 HOH A 68 668 101 HOH HOH . 
F 5 HOH A 69 669 87 HOH HOH . 
F 5 HOH A 70 670 235 HOH HOH . 
F 5 HOH A 71 671 150 HOH HOH . 
F 5 HOH A 72 672 189 HOH HOH . 
F 5 HOH A 73 673 221 HOH HOH . 
F 5 HOH A 74 674 216 HOH HOH . 
F 5 HOH A 75 675 154 HOH HOH . 
F 5 HOH A 76 676 229 HOH HOH . 
F 5 HOH A 77 677 205 HOH HOH . 
F 5 HOH A 78 678 193 HOH HOH . 
F 5 HOH A 79 679 59 HOH HOH . 
F 5 HOH A 80 680 120 HOH HOH . 
F 5 HOH A 81 681 198 HOH HOH . 
F 5 HOH A 82 682 167 HOH HOH . 
F 5 HOH A 83 683 230 HOH HOH . 
F 5 HOH A 84 684 161 HOH HOH . 
F 5 HOH A 85 685 172 HOH HOH . 
F 5 HOH A 86 686 173 HOH HOH . 
F 5 HOH A 87 687 181 HOH HOH . 
F 5 HOH A 88 688 228 HOH HOH . 
F 5 HOH A 89 689 214 HOH HOH . 
F 5 HOH A 90 690 210 HOH HOH . 
F 5 HOH A 91 691 204 HOH HOH . 
F 5 HOH A 92 692 211 HOH HOH . 
F 5 HOH A 93 693 195 HOH HOH . 
G 5 HOH B 1 501 212 HOH HOH . 
G 5 HOH B 2 502 125 HOH HOH . 
G 5 HOH B 3 503 234 HOH HOH . 
G 5 HOH B 4 504 110 HOH HOH . 
G 5 HOH B 5 505 34 HOH HOH . 
G 5 HOH B 6 506 33 HOH HOH . 
G 5 HOH B 7 507 55 HOH HOH . 
G 5 HOH B 8 508 148 HOH HOH . 
G 5 HOH B 9 509 222 HOH HOH . 
G 5 HOH B 10 510 9 HOH HOH . 
G 5 HOH B 11 511 27 HOH HOH . 
G 5 HOH B 12 512 207 HOH HOH . 
G 5 HOH B 13 513 20 HOH HOH . 
G 5 HOH B 14 514 192 HOH HOH . 
G 5 HOH B 15 515 151 HOH HOH . 
G 5 HOH B 16 516 111 HOH HOH . 
G 5 HOH B 17 517 113 HOH HOH . 
G 5 HOH B 18 518 56 HOH HOH . 
G 5 HOH B 19 519 145 HOH HOH . 
G 5 HOH B 20 520 103 HOH HOH . 
G 5 HOH B 21 521 89 HOH HOH . 
G 5 HOH B 22 522 48 HOH HOH . 
G 5 HOH B 23 523 90 HOH HOH . 
G 5 HOH B 24 524 139 HOH HOH . 
G 5 HOH B 25 525 35 HOH HOH . 
G 5 HOH B 26 526 200 HOH HOH . 
G 5 HOH B 27 527 26 HOH HOH . 
G 5 HOH B 28 528 14 HOH HOH . 
G 5 HOH B 29 529 160 HOH HOH . 
G 5 HOH B 30 530 19 HOH HOH . 
G 5 HOH B 31 531 15 HOH HOH . 
G 5 HOH B 32 532 140 HOH HOH . 
G 5 HOH B 33 533 1 HOH HOH . 
G 5 HOH B 34 534 106 HOH HOH . 
G 5 HOH B 35 535 65 HOH HOH . 
G 5 HOH B 36 536 57 HOH HOH . 
G 5 HOH B 37 537 80 HOH HOH . 
G 5 HOH B 38 538 231 HOH HOH . 
G 5 HOH B 39 539 16 HOH HOH . 
G 5 HOH B 40 540 30 HOH HOH . 
G 5 HOH B 41 541 93 HOH HOH . 
G 5 HOH B 42 542 5 HOH HOH . 
G 5 HOH B 43 543 12 HOH HOH . 
G 5 HOH B 44 544 2 HOH HOH . 
G 5 HOH B 45 545 46 HOH HOH . 
G 5 HOH B 46 546 7 HOH HOH . 
G 5 HOH B 47 547 209 HOH HOH . 
G 5 HOH B 48 548 45 HOH HOH . 
G 5 HOH B 49 549 85 HOH HOH . 
G 5 HOH B 50 550 53 HOH HOH . 
G 5 HOH B 51 551 3 HOH HOH . 
G 5 HOH B 52 552 143 HOH HOH . 
G 5 HOH B 53 553 49 HOH HOH . 
G 5 HOH B 54 554 153 HOH HOH . 
G 5 HOH B 55 555 51 HOH HOH . 
G 5 HOH B 56 556 47 HOH HOH . 
G 5 HOH B 57 557 21 HOH HOH . 
G 5 HOH B 58 558 67 HOH HOH . 
G 5 HOH B 59 559 197 HOH HOH . 
G 5 HOH B 60 560 28 HOH HOH . 
G 5 HOH B 61 561 63 HOH HOH . 
G 5 HOH B 62 562 188 HOH HOH . 
G 5 HOH B 63 563 4 HOH HOH . 
G 5 HOH B 64 564 66 HOH HOH . 
G 5 HOH B 65 565 37 HOH HOH . 
G 5 HOH B 66 566 149 HOH HOH . 
G 5 HOH B 67 567 41 HOH HOH . 
G 5 HOH B 68 568 31 HOH HOH . 
G 5 HOH B 69 569 99 HOH HOH . 
G 5 HOH B 70 570 179 HOH HOH . 
G 5 HOH B 71 571 76 HOH HOH . 
G 5 HOH B 72 572 174 HOH HOH . 
G 5 HOH B 73 573 138 HOH HOH . 
G 5 HOH B 74 574 155 HOH HOH . 
G 5 HOH B 75 575 95 HOH HOH . 
G 5 HOH B 76 576 13 HOH HOH . 
G 5 HOH B 77 577 137 HOH HOH . 
G 5 HOH B 78 578 157 HOH HOH . 
G 5 HOH B 79 579 44 HOH HOH . 
G 5 HOH B 80 580 112 HOH HOH . 
G 5 HOH B 81 581 220 HOH HOH . 
G 5 HOH B 82 582 107 HOH HOH . 
G 5 HOH B 83 583 183 HOH HOH . 
G 5 HOH B 84 584 23 HOH HOH . 
G 5 HOH B 85 585 50 HOH HOH . 
G 5 HOH B 86 586 24 HOH HOH . 
G 5 HOH B 87 587 11 HOH HOH . 
G 5 HOH B 88 588 215 HOH HOH . 
G 5 HOH B 89 589 146 HOH HOH . 
G 5 HOH B 90 590 129 HOH HOH . 
G 5 HOH B 91 591 233 HOH HOH . 
G 5 HOH B 92 592 69 HOH HOH . 
G 5 HOH B 93 593 116 HOH HOH . 
G 5 HOH B 94 594 164 HOH HOH . 
G 5 HOH B 95 595 158 HOH HOH . 
G 5 HOH B 96 596 169 HOH HOH . 
G 5 HOH B 97 597 58 HOH HOH . 
G 5 HOH B 98 598 206 HOH HOH . 
G 5 HOH B 99 599 128 HOH HOH . 
G 5 HOH B 100 600 203 HOH HOH . 
G 5 HOH B 101 601 83 HOH HOH . 
G 5 HOH B 102 602 170 HOH HOH . 
G 5 HOH B 103 603 199 HOH HOH . 
G 5 HOH B 104 604 213 HOH HOH . 
G 5 HOH B 105 605 182 HOH HOH . 
G 5 HOH B 106 606 178 HOH HOH . 
G 5 HOH B 107 607 177 HOH HOH . 
G 5 HOH B 108 608 225 HOH HOH . 
G 5 HOH B 109 609 119 HOH HOH . 
G 5 HOH B 110 610 132 HOH HOH . 
G 5 HOH B 111 611 78 HOH HOH . 
G 5 HOH B 112 612 71 HOH HOH . 
G 5 HOH B 113 613 79 HOH HOH . 
G 5 HOH B 114 614 163 HOH HOH . 
G 5 HOH B 115 615 131 HOH HOH . 
G 5 HOH B 116 616 218 HOH HOH . 
H 5 HOH C 1 501 130 HOH HOH . 
H 5 HOH C 2 502 121 HOH HOH . 
H 5 HOH C 3 503 117 HOH HOH . 
H 5 HOH C 4 504 168 HOH HOH . 
H 5 HOH C 5 505 98 HOH HOH . 
H 5 HOH C 6 506 180 HOH HOH . 
H 5 HOH C 7 507 190 HOH HOH . 
H 5 HOH C 8 508 176 HOH HOH . 
H 5 HOH C 9 509 226 HOH HOH . 
H 5 HOH C 10 510 194 HOH HOH . 
H 5 HOH C 11 511 127 HOH HOH . 
H 5 HOH C 12 512 196 HOH HOH . 
H 5 HOH C 13 513 126 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           ZN 
_atom_site.label_atom_id         ZN 
_atom_site.label_comp_id         ZN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         E 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               16.26 
_atom_site.Cartn_y               28.458 
_atom_site.Cartn_z               48.101 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        38.87 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          ZN 
_atom_site.auth_comp_id          ZN 
_atom_site.auth_seq_id           401 
_atom_site.auth_asym_id          B 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              72 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           268 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           1 
#