data_6YUV # _model_server_result.job_id 2T9bTDN51Den8JVKJxa9wA _model_server_result.datetime_utc '2025-03-05 01:55:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yuv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6YUV # _exptl.entry_id 6YUV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6YUV _cell.length_a 138.32 _cell.length_b 138.32 _cell.length_c 70.56 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YUV _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall 'P 4abw 2nw' _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_554 -y,-x,-z-1/2 0 -1 0 -1 0 0 0 0 -1 0 0 -35.28 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 237 n n C1 C2 PGE sing 238 n n C1 H1 PGE sing 239 n n C1 H12 PGE sing 240 n n O1 HO1 PGE sing 241 n n C2 O2 PGE sing 242 n n C2 H2 PGE sing 243 n n C2 H22 PGE sing 244 n n O2 C3 PGE sing 245 n n C3 C4 PGE sing 246 n n C3 H3 PGE sing 247 n n C3 H32 PGE sing 248 n n C4 O3 PGE sing 249 n n C4 H4 PGE sing 250 n n C4 H42 PGE sing 251 n n O4 C6 PGE sing 252 n n O4 HO4 PGE sing 253 n n C6 C5 PGE sing 254 n n C6 H6 PGE sing 255 n n C6 H62 PGE sing 256 n n C5 O3 PGE sing 257 n n C5 H5 PGE sing 258 n n C5 H52 PGE sing 259 n n # _atom_sites.entry_id 6YUV _atom_sites.fract_transf_matrix[1][1] 0.00723 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014172 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 301 1 CL CL . D 3 PGE B 1 301 301 PGE PGE . E 2 CL B 1 302 2 CL CL . F 4 HOH A 1 401 92 HOH HOH . F 4 HOH A 2 402 132 HOH HOH . F 4 HOH A 3 403 96 HOH HOH . F 4 HOH A 4 404 35 HOH HOH . F 4 HOH A 5 405 162 HOH HOH . F 4 HOH A 6 406 26 HOH HOH . F 4 HOH A 7 407 7 HOH HOH . F 4 HOH A 8 408 37 HOH HOH . F 4 HOH A 9 409 44 HOH HOH . F 4 HOH A 10 410 88 HOH HOH . F 4 HOH A 11 411 20 HOH HOH . F 4 HOH A 12 412 109 HOH HOH . F 4 HOH A 13 413 125 HOH HOH . F 4 HOH A 14 414 51 HOH HOH . F 4 HOH A 15 415 121 HOH HOH . F 4 HOH A 16 416 66 HOH HOH . F 4 HOH A 17 417 158 HOH HOH . F 4 HOH A 18 418 100 HOH HOH . F 4 HOH A 19 419 22 HOH HOH . F 4 HOH A 20 420 58 HOH HOH . F 4 HOH A 21 421 60 HOH HOH . F 4 HOH A 22 422 16 HOH HOH . F 4 HOH A 23 423 87 HOH HOH . F 4 HOH A 24 424 80 HOH HOH . F 4 HOH A 25 425 53 HOH HOH . F 4 HOH A 26 426 57 HOH HOH . F 4 HOH A 27 427 21 HOH HOH . F 4 HOH A 28 428 122 HOH HOH . F 4 HOH A 29 429 32 HOH HOH . F 4 HOH A 30 430 139 HOH HOH . F 4 HOH A 31 431 105 HOH HOH . F 4 HOH A 32 432 45 HOH HOH . F 4 HOH A 33 433 2 HOH HOH . F 4 HOH A 34 434 19 HOH HOH . F 4 HOH A 35 435 33 HOH HOH . F 4 HOH A 36 436 54 HOH HOH . F 4 HOH A 37 437 3 HOH HOH . F 4 HOH A 38 438 148 HOH HOH . F 4 HOH A 39 439 119 HOH HOH . F 4 HOH A 40 440 103 HOH HOH . F 4 HOH A 41 441 128 HOH HOH . F 4 HOH A 42 442 12 HOH HOH . F 4 HOH A 43 443 5 HOH HOH . F 4 HOH A 44 444 34 HOH HOH . F 4 HOH A 45 445 38 HOH HOH . F 4 HOH A 46 446 11 HOH HOH . F 4 HOH A 47 447 47 HOH HOH . F 4 HOH A 48 448 106 HOH HOH . F 4 HOH A 49 449 98 HOH HOH . F 4 HOH A 50 450 149 HOH HOH . F 4 HOH A 51 451 77 HOH HOH . F 4 HOH A 52 452 104 HOH HOH . F 4 HOH A 53 453 156 HOH HOH . F 4 HOH A 54 454 71 HOH HOH . F 4 HOH A 55 455 101 HOH HOH . F 4 HOH A 56 456 131 HOH HOH . F 4 HOH A 57 457 113 HOH HOH . F 4 HOH A 58 458 76 HOH HOH . F 4 HOH A 59 459 142 HOH HOH . F 4 HOH A 60 460 141 HOH HOH . F 4 HOH A 61 461 134 HOH HOH . F 4 HOH A 62 462 150 HOH HOH . F 4 HOH A 63 463 15 HOH HOH . F 4 HOH A 64 464 163 HOH HOH . F 4 HOH A 65 465 83 HOH HOH . F 4 HOH A 66 466 39 HOH HOH . F 4 HOH A 67 467 55 HOH HOH . F 4 HOH A 68 468 73 HOH HOH . F 4 HOH A 69 469 147 HOH HOH . F 4 HOH A 70 470 1 HOH HOH . F 4 HOH A 71 471 40 HOH HOH . F 4 HOH A 72 472 123 HOH HOH . F 4 HOH A 73 473 48 HOH HOH . F 4 HOH A 74 474 59 HOH HOH . F 4 HOH A 75 475 107 HOH HOH . F 4 HOH A 76 476 126 HOH HOH . F 4 HOH A 77 477 153 HOH HOH . G 4 HOH B 1 401 75 HOH HOH . G 4 HOH B 2 402 146 HOH HOH . G 4 HOH B 3 403 30 HOH HOH . G 4 HOH B 4 404 117 HOH HOH . G 4 HOH B 5 405 151 HOH HOH . G 4 HOH B 6 406 93 HOH HOH . G 4 HOH B 7 407 120 HOH HOH . G 4 HOH B 8 408 62 HOH HOH . G 4 HOH B 9 409 138 HOH HOH . G 4 HOH B 10 410 43 HOH HOH . G 4 HOH B 11 411 89 HOH HOH . G 4 HOH B 12 412 50 HOH HOH . G 4 HOH B 13 413 68 HOH HOH . G 4 HOH B 14 414 70 HOH HOH . G 4 HOH B 15 415 29 HOH HOH . G 4 HOH B 16 416 8 HOH HOH . G 4 HOH B 17 417 111 HOH HOH . G 4 HOH B 18 418 18 HOH HOH . G 4 HOH B 19 419 140 HOH HOH . G 4 HOH B 20 420 17 HOH HOH . G 4 HOH B 21 421 79 HOH HOH . G 4 HOH B 22 422 24 HOH HOH . G 4 HOH B 23 423 23 HOH HOH . G 4 HOH B 24 424 25 HOH HOH . G 4 HOH B 25 425 155 HOH HOH . G 4 HOH B 26 426 85 HOH HOH . G 4 HOH B 27 427 41 HOH HOH . G 4 HOH B 28 428 56 HOH HOH . G 4 HOH B 29 429 65 HOH HOH . G 4 HOH B 30 430 69 HOH HOH . G 4 HOH B 31 431 6 HOH HOH . G 4 HOH B 32 432 14 HOH HOH . G 4 HOH B 33 433 86 HOH HOH . G 4 HOH B 34 434 49 HOH HOH . G 4 HOH B 35 435 42 HOH HOH . G 4 HOH B 36 436 78 HOH HOH . G 4 HOH B 37 437 31 HOH HOH . G 4 HOH B 38 438 61 HOH HOH . G 4 HOH B 39 439 9 HOH HOH . G 4 HOH B 40 440 91 HOH HOH . G 4 HOH B 41 441 143 HOH HOH . G 4 HOH B 42 442 28 HOH HOH . G 4 HOH B 43 443 116 HOH HOH . G 4 HOH B 44 444 110 HOH HOH . G 4 HOH B 45 445 84 HOH HOH . G 4 HOH B 46 446 64 HOH HOH . G 4 HOH B 47 447 130 HOH HOH . G 4 HOH B 48 448 13 HOH HOH . G 4 HOH B 49 449 63 HOH HOH . G 4 HOH B 50 450 81 HOH HOH . G 4 HOH B 51 451 72 HOH HOH . G 4 HOH B 52 452 124 HOH HOH . G 4 HOH B 53 453 52 HOH HOH . G 4 HOH B 54 454 82 HOH HOH . G 4 HOH B 55 455 157 HOH HOH . G 4 HOH B 56 456 136 HOH HOH . G 4 HOH B 57 457 129 HOH HOH . G 4 HOH B 58 458 46 HOH HOH . G 4 HOH B 59 459 10 HOH HOH . G 4 HOH B 60 460 99 HOH HOH . G 4 HOH B 61 461 137 HOH HOH . G 4 HOH B 62 462 36 HOH HOH . G 4 HOH B 63 463 108 HOH HOH . G 4 HOH B 64 464 102 HOH HOH . G 4 HOH B 65 465 90 HOH HOH . G 4 HOH B 66 466 154 HOH HOH . G 4 HOH B 67 467 144 HOH HOH . G 4 HOH B 68 468 95 HOH HOH . G 4 HOH B 69 469 4 HOH HOH . G 4 HOH B 70 470 97 HOH HOH . G 4 HOH B 71 471 27 HOH HOH . G 4 HOH B 72 472 159 HOH HOH . G 4 HOH B 73 473 135 HOH HOH . G 4 HOH B 74 474 114 HOH HOH . G 4 HOH B 75 475 74 HOH HOH . G 4 HOH B 76 476 152 HOH HOH . G 4 HOH B 77 477 160 HOH HOH . G 4 HOH B 78 478 165 HOH HOH . G 4 HOH B 79 479 67 HOH HOH . G 4 HOH B 80 480 115 HOH HOH . G 4 HOH B 81 481 145 HOH HOH . G 4 HOH B 82 482 161 HOH HOH . G 4 HOH B 83 483 133 HOH HOH . G 4 HOH B 84 484 118 HOH HOH . G 4 HOH B 85 485 164 HOH HOH . G 4 HOH B 86 486 94 HOH HOH . G 4 HOH B 87 487 127 HOH HOH . G 4 HOH B 88 488 112 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . D 3 -20.469 34.212 -3.039 1 59.79 ? C1 PGE 301 B 1 HETATM 2 O O1 PGE . . . D 3 -20.7 33.773 -4.38 1 62.78 ? O1 PGE 301 B 1 HETATM 3 C C2 PGE . . . D 3 -21.124 35.56 -2.836 1 65.61 ? C2 PGE 301 B 1 HETATM 4 O O2 PGE . . . D 3 -20.249 36.464 -2.188 1 63.3 ? O2 PGE 301 B 1 HETATM 5 C C3 PGE . . . D 3 -20.523 37.807 -2.538 1 61.43 ? C3 PGE 301 B 1 HETATM 6 C C4 PGE . . . D 3 -19.252 38.409 -3.097 1 71.55 ? C4 PGE 301 B 1 HETATM 7 O O4 PGE . . . D 3 -19.696 36.704 -5.632 1 69.31 ? O4 PGE 301 B 1 HETATM 8 C C6 PGE . . . D 3 -19.428 38.017 -6.128 1 74.63 ? C6 PGE 301 B 1 HETATM 9 C C5 PGE . . . D 3 -20.195 39.003 -5.267 1 77.62 ? C5 PGE 301 B 1 HETATM 10 O O3 PGE . . . D 3 -19.456 39.383 -4.116 1 71.08 ? O3 PGE 301 B 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 36 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 319 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 10 #