data_6YUW
#
_model_server_result.job_id            fpm_6tyX4MAoTfBMnQRKzQ 
_model_server_result.datetime_utc      '2024-10-12 02:19:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yuw 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    6YUW 
#
_exptl.entry_id    6YUW 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              193.242 
_entity.id                          3 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            '1-(cyclopropylmethyl)-2,5-dimethyl-pyrrole-3-carboxylic acid' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6YUW 
_cell.length_a            59.397 
_cell.length_b            73.263 
_cell.length_c            78.398 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YUW 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    'P 2ac 2ab' 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 24 A CYS 101 1_555 A SG CYS 106 A CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 A SG CYS 53 A CYS 130 1_555 A SG CYS 59 A CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? 
disulf ? disulf3 A SG CYS 202 A CYS 279 1_555 A SG CYS 208 A CYS 285 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 A SG CYS 229 A CYS 306 1_555 A SG CYS 241 A CYS 318 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.057 ? 
disulf ? disulf5 A SG CYS 309 A CYS 386 1_555 A SG CYS 372 A CYS 449 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? 
disulf ? disulf6 A SG CYS 336 A CYS 413 1_555 A SG CYS 355 A CYS 432 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.006 ? 
disulf ? disulf7 A SG CYS 363 A CYS 440 1_555 A SG CYS 368 A CYS 445 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
covale ? covale1 A ND2 ASN 19 A ASN 96 1_555 E C1 NAG . A NAG 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.433 ? 
#
_chem_comp.formula           'C11 H15 N O2' 
_chem_comp.formula_weight    193.242 
_chem_comp.id                PQZ 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '1-(cyclopropylmethyl)-2,5-dimethyl-pyrrole-3-carboxylic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C8 C7 PQZ sing 290 n n 
C8 C6 PQZ sing 291 n n 
C7 C6 PQZ sing 292 n n 
C6 C5 PQZ sing 293 n n 
C9 C4 PQZ sing 294 n n 
O C10 PQZ doub 295 n n 
C4 N PQZ sing 296 n y 
C4 C3 PQZ doub 297 n y 
C5 N PQZ sing 298 n n 
C10 C3 PQZ sing 299 n n 
C10 O1 PQZ sing 300 n n 
N C1 PQZ sing 301 n y 
C3 C2 PQZ sing 302 n y 
C1 C2 PQZ doub 303 n y 
C1 C PQZ sing 304 n n 
C2 H1 PQZ sing 305 n n 
C5 H2 PQZ sing 306 n n 
C5 H3 PQZ sing 307 n n 
C6 H4 PQZ sing 308 n n 
C7 H5 PQZ sing 309 n n 
C7 H6 PQZ sing 310 n n 
C8 H7 PQZ sing 311 n n 
C8 H8 PQZ sing 312 n n 
C9 H9 PQZ sing 313 n n 
C9 H10 PQZ sing 314 n n 
C9 H11 PQZ sing 315 n n 
C H12 PQZ sing 316 n n 
C H13 PQZ sing 317 n n 
C H14 PQZ sing 318 n n 
O1 H15 PQZ sing 319 n n 
#
_atom_sites.entry_id                     6YUW 
_atom_sites.fract_transf_matrix[1][1]    0.016836 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013649 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012755 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 501 1 SO4 SO4 . 
C 2 SO4 A 1 502 2 SO4 SO4 . 
D 3 PQZ A 1 503 1501 PQZ 454 . 
E 4 NAG A 1 504 1502 NAG NAG . 
F 5 HOH A 1 601 95 HOH HOH . 
F 5 HOH A 2 602 23 HOH HOH . 
F 5 HOH A 3 603 10 HOH HOH . 
F 5 HOH A 4 604 27 HOH HOH . 
F 5 HOH A 5 605 115 HOH HOH . 
F 5 HOH A 6 606 148 HOH HOH . 
F 5 HOH A 7 607 36 HOH HOH . 
F 5 HOH A 8 608 62 HOH HOH . 
F 5 HOH A 9 609 54 HOH HOH . 
F 5 HOH A 10 610 142 HOH HOH . 
F 5 HOH A 11 611 91 HOH HOH . 
F 5 HOH A 12 612 109 HOH HOH . 
F 5 HOH A 13 613 75 HOH HOH . 
F 5 HOH A 14 614 152 HOH HOH . 
F 5 HOH A 15 615 76 HOH HOH . 
F 5 HOH A 16 616 166 HOH HOH . 
F 5 HOH A 17 617 60 HOH HOH . 
F 5 HOH A 18 618 150 HOH HOH . 
F 5 HOH A 19 619 104 HOH HOH . 
F 5 HOH A 20 620 81 HOH HOH . 
F 5 HOH A 21 621 55 HOH HOH . 
F 5 HOH A 22 622 3 HOH HOH . 
F 5 HOH A 23 623 93 HOH HOH . 
F 5 HOH A 24 624 78 HOH HOH . 
F 5 HOH A 25 625 129 HOH HOH . 
F 5 HOH A 26 626 50 HOH HOH . 
F 5 HOH A 27 627 73 HOH HOH . 
F 5 HOH A 28 628 34 HOH HOH . 
F 5 HOH A 29 629 136 HOH HOH . 
F 5 HOH A 30 630 46 HOH HOH . 
F 5 HOH A 31 631 1 HOH HOH . 
F 5 HOH A 32 632 26 HOH HOH . 
F 5 HOH A 33 633 138 HOH HOH . 
F 5 HOH A 34 634 33 HOH HOH . 
F 5 HOH A 35 635 38 HOH HOH . 
F 5 HOH A 36 636 22 HOH HOH . 
F 5 HOH A 37 637 44 HOH HOH . 
F 5 HOH A 38 638 69 HOH HOH . 
F 5 HOH A 39 639 21 HOH HOH . 
F 5 HOH A 40 640 16 HOH HOH . 
F 5 HOH A 41 641 32 HOH HOH . 
F 5 HOH A 42 642 107 HOH HOH . 
F 5 HOH A 43 643 94 HOH HOH . 
F 5 HOH A 44 644 160 HOH HOH . 
F 5 HOH A 45 645 61 HOH HOH . 
F 5 HOH A 46 646 151 HOH HOH . 
F 5 HOH A 47 647 119 HOH HOH . 
F 5 HOH A 48 648 43 HOH HOH . 
F 5 HOH A 49 649 48 HOH HOH . 
F 5 HOH A 50 650 74 HOH HOH . 
F 5 HOH A 51 651 40 HOH HOH . 
F 5 HOH A 52 652 8 HOH HOH . 
F 5 HOH A 53 653 117 HOH HOH . 
F 5 HOH A 54 654 64 HOH HOH . 
F 5 HOH A 55 655 31 HOH HOH . 
F 5 HOH A 56 656 58 HOH HOH . 
F 5 HOH A 57 657 20 HOH HOH . 
F 5 HOH A 58 658 80 HOH HOH . 
F 5 HOH A 59 659 79 HOH HOH . 
F 5 HOH A 60 660 92 HOH HOH . 
F 5 HOH A 61 661 111 HOH HOH . 
F 5 HOH A 62 662 39 HOH HOH . 
F 5 HOH A 63 663 42 HOH HOH . 
F 5 HOH A 64 664 135 HOH HOH . 
F 5 HOH A 65 665 63 HOH HOH . 
F 5 HOH A 66 666 71 HOH HOH . 
F 5 HOH A 67 667 143 HOH HOH . 
F 5 HOH A 68 668 4 HOH HOH . 
F 5 HOH A 69 669 14 HOH HOH . 
F 5 HOH A 70 670 125 HOH HOH . 
F 5 HOH A 71 671 17 HOH HOH . 
F 5 HOH A 72 672 112 HOH HOH . 
F 5 HOH A 73 673 84 HOH HOH . 
F 5 HOH A 74 674 24 HOH HOH . 
F 5 HOH A 75 675 13 HOH HOH . 
F 5 HOH A 76 676 130 HOH HOH . 
F 5 HOH A 77 677 35 HOH HOH . 
F 5 HOH A 78 678 45 HOH HOH . 
F 5 HOH A 79 679 7 HOH HOH . 
F 5 HOH A 80 680 77 HOH HOH . 
F 5 HOH A 81 681 2 HOH HOH . 
F 5 HOH A 82 682 147 HOH HOH . 
F 5 HOH A 83 683 12 HOH HOH . 
F 5 HOH A 84 684 87 HOH HOH . 
F 5 HOH A 85 685 56 HOH HOH . 
F 5 HOH A 86 686 114 HOH HOH . 
F 5 HOH A 87 687 89 HOH HOH . 
F 5 HOH A 88 688 146 HOH HOH . 
F 5 HOH A 89 689 6 HOH HOH . 
F 5 HOH A 90 690 118 HOH HOH . 
F 5 HOH A 91 691 163 HOH HOH . 
F 5 HOH A 92 692 9 HOH HOH . 
F 5 HOH A 93 693 30 HOH HOH . 
F 5 HOH A 94 694 158 HOH HOH . 
F 5 HOH A 95 695 47 HOH HOH . 
F 5 HOH A 96 696 11 HOH HOH . 
F 5 HOH A 97 697 19 HOH HOH . 
F 5 HOH A 98 698 5 HOH HOH . 
F 5 HOH A 99 699 49 HOH HOH . 
F 5 HOH A 100 700 70 HOH HOH . 
F 5 HOH A 101 701 103 HOH HOH . 
F 5 HOH A 102 702 88 HOH HOH . 
F 5 HOH A 103 703 25 HOH HOH . 
F 5 HOH A 104 704 134 HOH HOH . 
F 5 HOH A 105 705 100 HOH HOH . 
F 5 HOH A 106 706 66 HOH HOH . 
F 5 HOH A 107 707 51 HOH HOH . 
F 5 HOH A 108 708 164 HOH HOH . 
F 5 HOH A 109 709 102 HOH HOH . 
F 5 HOH A 110 710 28 HOH HOH . 
F 5 HOH A 111 711 157 HOH HOH . 
F 5 HOH A 112 712 141 HOH HOH . 
F 5 HOH A 113 713 53 HOH HOH . 
F 5 HOH A 114 714 68 HOH HOH . 
F 5 HOH A 115 715 41 HOH HOH . 
F 5 HOH A 116 716 139 HOH HOH . 
F 5 HOH A 117 717 113 HOH HOH . 
F 5 HOH A 118 718 116 HOH HOH . 
F 5 HOH A 119 719 29 HOH HOH . 
F 5 HOH A 120 720 57 HOH HOH . 
F 5 HOH A 121 721 108 HOH HOH . 
F 5 HOH A 122 722 65 HOH HOH . 
F 5 HOH A 123 723 37 HOH HOH . 
F 5 HOH A 124 724 140 HOH HOH . 
F 5 HOH A 125 725 153 HOH HOH . 
F 5 HOH A 126 726 82 HOH HOH . 
F 5 HOH A 127 727 18 HOH HOH . 
F 5 HOH A 128 728 59 HOH HOH . 
F 5 HOH A 129 729 165 HOH HOH . 
F 5 HOH A 130 730 155 HOH HOH . 
F 5 HOH A 131 731 159 HOH HOH . 
F 5 HOH A 132 732 137 HOH HOH . 
F 5 HOH A 133 733 154 HOH HOH . 
F 5 HOH A 134 734 132 HOH HOH . 
F 5 HOH A 135 735 161 HOH HOH . 
F 5 HOH A 136 736 67 HOH HOH . 
F 5 HOH A 137 737 123 HOH HOH . 
F 5 HOH A 138 738 83 HOH HOH . 
F 5 HOH A 139 739 121 HOH HOH . 
F 5 HOH A 140 740 101 HOH HOH . 
F 5 HOH A 141 741 106 HOH HOH . 
F 5 HOH A 142 742 149 HOH HOH . 
F 5 HOH A 143 743 105 HOH HOH . 
F 5 HOH A 144 744 133 HOH HOH . 
F 5 HOH A 145 745 97 HOH HOH . 
F 5 HOH A 146 746 145 HOH HOH . 
F 5 HOH A 147 747 122 HOH HOH . 
F 5 HOH A 148 748 86 HOH HOH . 
F 5 HOH A 149 749 120 HOH HOH . 
F 5 HOH A 150 750 99 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 PQZ . . . D 3 28.009 -4.4 -4.87 1 43.86 ? C1 PQZ 503 A 1 
HETATM 2 C C2 PQZ . . . D 3 26.779 -3.769 -4.841 1 42.24 ? C2 PQZ 503 A 1 
HETATM 3 C C3 PQZ . . . D 3 25.834 -4.622 -5.495 1 40.67 ? C3 PQZ 503 A 1 
HETATM 4 C C4 PQZ . . . D 3 26.52 -5.754 -5.923 1 39.35 ? C4 PQZ 503 A 1 
HETATM 5 C C5 PQZ . . . D 3 28.884 -6.596 -5.746 1 50.34 ? C5 PQZ 503 A 1 
HETATM 6 C C6 PQZ . . . D 3 29.609 -6.372 -7.037 1 55.06 ? C6 PQZ 503 A 1 
HETATM 7 C C7 PQZ . . . D 3 30.484 -7.455 -7.509 1 55.96 ? C7 PQZ 503 A 1 
HETATM 8 C C8 PQZ . . . D 3 29.212 -7.184 -8.22 1 56.04 ? C8 PQZ 503 A 1 
HETATM 9 C C9 PQZ . . . D 3 26.049 -6.961 -6.664 1 32.99 ? C9 PQZ 503 A 1 
HETATM 10 C C10 PQZ . . . D 3 24.385 -4.33 -5.643 1 43.12 ? C10 PQZ 503 A 1 
HETATM 11 N N PQZ . . . D 3 27.837 -5.605 -5.526 1 44.47 ? N PQZ 503 A 1 
HETATM 12 C C PQZ . . . D 3 29.33 -3.975 -4.323 1 44.05 ? C PQZ 503 A 1 
HETATM 13 O O PQZ . . . D 3 23.602 -5.135 -6.131 1 41.83 ? O PQZ 503 A 1 
HETATM 14 O O1 PQZ . . . D 3 23.993 -3.174 -5.174 1 46.75 ? O1 PQZ 503 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           14 
#