data_6YW0 # _model_server_result.job_id NcWkup_GKWywzre9dwB8ag _model_server_result.datetime_utc '2024-11-23 17:27:50' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yw0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":502}' # _entry.id 6YW0 # _exptl.entry_id 6YW0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 244.246 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '4-(isoquinolin-3-ylamino)-4-oxobutanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6YW0 _cell.length_a 110.927 _cell.length_b 110.927 _cell.length_c 39.66 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YW0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 173 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 27 A CYS 201 1_555 A SG CYS 34 A CYS 208 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.033 ? covale ? covale1 A C LEU 17 A LEU 191 1_555 A N MLY 18 A MLY 192 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MLY 18 A MLY 192 1_555 A N LEU 19 A LEU 193 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C ASN 29 A ASN 203 1_555 A N MLY 30 A MLY 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 A C MLY 30 A MLY 204 1_555 A N HIS 31 A HIS 205 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale5 A C GLY 41 A GLY 215 1_555 A N MLY 42 A MLY 216 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale6 A C MLY 42 A MLY 216 1_555 A N GLU 43 A GLU 217 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C GLY 59 A GLY 233 1_555 A N MLY 60 A MLY 234 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale8 A C MLY 60 A MLY 234 1_555 A N PHE 61 A PHE 235 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale9 A C GLN 69 A GLN 243 1_555 A N MLY 70 A MLY 244 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale10 A C MLY 70 A MLY 244 1_555 A N SER 71 A SER 245 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.311 ? covale ? covale11 A C SER 74 A SER 248 1_555 A N MLY 75 A MLY 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale12 A C MLY 75 A MLY 249 1_555 A N ASP 76 A ASP 250 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale13 A C ASP 80 A ASP 254 1_555 A N MLY 81 A MLY 255 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale14 A C MLY 81 A MLY 255 1_555 A N ILE 82 A ILE 256 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale15 A C GLY 87 A GLY 261 1_555 A N MLY 88 A MLY 262 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale16 A C MLY 88 A MLY 262 1_555 A N GLU 89 A GLU 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale17 A C GLY 111 A GLY 285 1_555 A N MLY 112 A MLY 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale18 A C MLY 112 A MLY 286 1_555 A N LEU 113 A LEU 287 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale19 A C TYR 116 A TYR 290 1_555 A N MLY 117 A MLY 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale20 A C MLY 117 A MLY 291 1_555 A N ILE 118 A ILE 292 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale21 A C THR 122 A THR 296 1_555 A N MLY 123 A MLY 297 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale22 A C MLY 123 A MLY 297 1_555 A N ALA 124 A ALA 298 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale23 A C ASN 157 A ASN 331 1_555 A N MLY 158 A MLY 332 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale24 A C MLY 158 A MLY 332 1_555 A N ASP 159 A ASP 333 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale25 A C ALA 162 A ALA 336 1_555 A N MLY 163 A MLY 337 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale26 A C MLY 163 A MLY 337 1_555 A N VAL 164 A VAL 338 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 A C GLY 175 A GLY 349 1_555 A N MLY 176 A MLY 350 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale28 A C MLY 176 A MLY 350 1_555 A N ALA 177 A ALA 351 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale29 A C PRO 184 A PRO 358 1_555 A N MLY 185 A MLY 359 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale30 A C MLY 185 A MLY 359 1_555 A N PHE 186 A PHE 360 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale31 A C ALA 225 A ALA 399 1_555 A N MLY 226 A MLY 400 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale32 A C MLY 226 A MLY 400 1_555 A N VAL 227 A VAL 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale33 A C VAL 227 A VAL 401 1_555 A N MLY 228 A MLY 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale34 A C MLY 228 A MLY 402 1_555 A N TYR 229 A TYR 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? metalc ? metalc1 A NE2 HIS 139 A HIS 313 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? metalc ? metalc2 A OD1 ASP 141 A ASP 315 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.124 ? metalc ? metalc3 A NE2 HIS 200 A HIS 374 1_555 B FE FE . A FE 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc4 B FE FE . A FE 501 1_555 C O2 2JP . A 2JP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc5 B FE FE . A FE 501 1_555 C N1 2JP . A 2JP 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.061 ? metalc ? metalc6 B FE FE . A FE 501 1_555 E O HOH . A HOH 623 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.354 ? # _chem_comp.formula 'C13 H12 N2 O3' _chem_comp.formula_weight 244.246 _chem_comp.id 2JP _chem_comp.mon_nstd_flag . _chem_comp.name '4-(isoquinolin-3-ylamino)-4-oxobutanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C7 C5 2JP doub 1 n y C7 C8 2JP sing 2 n y C5 C2 2JP sing 3 n y C8 C3 2JP doub 4 n y C2 C6 2JP doub 5 n y C2 C1 2JP sing 6 n y C6 C10 2JP sing 7 n y C3 C1 2JP sing 8 n y C1 C4 2JP doub 9 n y C10 N2 2JP sing 10 n n C10 N1 2JP doub 11 n y N2 C12 2JP sing 12 n n C13 C12 2JP sing 13 n n C13 C11 2JP sing 14 n n C12 O2 2JP doub 15 n n C4 N1 2JP sing 16 n y O1 C9 2JP doub 17 n n C9 O3 2JP sing 18 n n C9 C11 2JP sing 19 n n C6 H1 2JP sing 20 n n C5 H2 2JP sing 21 n n C7 H3 2JP sing 22 n n C8 H4 2JP sing 23 n n C3 H5 2JP sing 24 n n C4 H6 2JP sing 25 n n N2 H7 2JP sing 26 n n C13 H8 2JP sing 27 n n C13 H9 2JP sing 28 n n C11 H10 2JP sing 29 n n C11 H11 2JP sing 30 n n O3 H12 2JP sing 31 n n # _atom_sites.entry_id 6YW0 _atom_sites.fract_transf_matrix[1][1] 0.009015 _atom_sites.fract_transf_matrix[1][2] 0.005205 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01041 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.025215 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FE A 1 501 501 FE FE . C 3 2JP A 1 502 601 2JP 287 . D 4 BCT A 1 503 701 BCT BCT . E 5 HOH A 1 601 80 HOH HOH . E 5 HOH A 2 602 28 HOH HOH . E 5 HOH A 3 603 16 HOH HOH . E 5 HOH A 4 604 6 HOH HOH . E 5 HOH A 5 605 64 HOH HOH . E 5 HOH A 6 606 37 HOH HOH . E 5 HOH A 7 607 58 HOH HOH . E 5 HOH A 8 608 70 HOH HOH . E 5 HOH A 9 609 17 HOH HOH . E 5 HOH A 10 610 67 HOH HOH . E 5 HOH A 11 611 68 HOH HOH . E 5 HOH A 12 612 79 HOH HOH . E 5 HOH A 13 613 2 HOH HOH . E 5 HOH A 14 614 29 HOH HOH . E 5 HOH A 15 615 36 HOH HOH . E 5 HOH A 16 616 19 HOH HOH . E 5 HOH A 17 617 25 HOH HOH . E 5 HOH A 18 618 3 HOH HOH . E 5 HOH A 19 619 9 HOH HOH . E 5 HOH A 20 620 75 HOH HOH . E 5 HOH A 21 621 33 HOH HOH . E 5 HOH A 22 622 47 HOH HOH . E 5 HOH A 23 623 11 HOH HOH . E 5 HOH A 24 624 41 HOH HOH . E 5 HOH A 25 625 48 HOH HOH . E 5 HOH A 26 626 59 HOH HOH . E 5 HOH A 27 627 5 HOH HOH . E 5 HOH A 28 628 63 HOH HOH . E 5 HOH A 29 629 26 HOH HOH . E 5 HOH A 30 630 13 HOH HOH . E 5 HOH A 31 631 10 HOH HOH . E 5 HOH A 32 632 15 HOH HOH . E 5 HOH A 33 633 1 HOH HOH . E 5 HOH A 34 634 12 HOH HOH . E 5 HOH A 35 635 61 HOH HOH . E 5 HOH A 36 636 7 HOH HOH . E 5 HOH A 37 637 34 HOH HOH . E 5 HOH A 38 638 73 HOH HOH . E 5 HOH A 39 639 20 HOH HOH . E 5 HOH A 40 640 8 HOH HOH . E 5 HOH A 41 641 38 HOH HOH . E 5 HOH A 42 642 44 HOH HOH . E 5 HOH A 43 643 60 HOH HOH . E 5 HOH A 44 644 14 HOH HOH . E 5 HOH A 45 645 18 HOH HOH . E 5 HOH A 46 646 31 HOH HOH . E 5 HOH A 47 647 52 HOH HOH . E 5 HOH A 48 648 4 HOH HOH . E 5 HOH A 49 649 27 HOH HOH . E 5 HOH A 50 650 71 HOH HOH . E 5 HOH A 51 651 72 HOH HOH . E 5 HOH A 52 652 24 HOH HOH . E 5 HOH A 53 653 51 HOH HOH . E 5 HOH A 54 654 42 HOH HOH . E 5 HOH A 55 655 76 HOH HOH . E 5 HOH A 56 656 77 HOH HOH . E 5 HOH A 57 657 50 HOH HOH . E 5 HOH A 58 658 74 HOH HOH . E 5 HOH A 59 659 54 HOH HOH . E 5 HOH A 60 660 62 HOH HOH . E 5 HOH A 61 661 49 HOH HOH . E 5 HOH A 62 662 78 HOH HOH . E 5 HOH A 63 663 53 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 2JP . . . C 3 -4.386 47.048 -3.38 1 40.11 ? C6 2JP 502 A 1 HETATM 2 C C2 2JP . . . C 3 -4.141 48.432 -3.34 1 44.22 ? C2 2JP 502 A 1 HETATM 3 C C5 2JP . . . C 3 -5.037 49.327 -2.73 1 47.26 ? C5 2JP 502 A 1 HETATM 4 C C7 2JP . . . C 3 -4.754 50.686 -2.715 1 48.89 ? C7 2JP 502 A 1 HETATM 5 C C8 2JP . . . C 3 -3.585 51.159 -3.304 1 49.48 ? C8 2JP 502 A 1 HETATM 6 C C3 2JP . . . C 3 -2.7 50.274 -3.906 1 48.49 ? C3 2JP 502 A 1 HETATM 7 C C1 2JP . . . C 3 -2.983 48.897 -3.922 1 42.92 ? C1 2JP 502 A 1 HETATM 8 C C4 2JP . . . C 3 -2.105 47.977 -4.526 1 38.41 ? C4 2JP 502 A 1 HETATM 9 N N1 2JP . . . C 3 -2.365 46.684 -4.546 1 33.59 ? N1 2JP 502 A 1 HETATM 10 C C10 2JP . . . C 3 -3.472 46.207 -3.993 1 38.02 ? C10 2JP 502 A 1 HETATM 11 N N2 2JP . . . C 3 -3.75 44.789 -4.023 1 34.18 ? N2 2JP 502 A 1 HETATM 12 C C12 2JP . . . C 3 -2.995 43.916 -4.897 1 34.7 ? C12 2JP 502 A 1 HETATM 13 O O2 2JP . . . C 3 -2.136 44.338 -5.599 1 29.92 ? O2 2JP 502 A 1 HETATM 14 C C13 2JP . . . C 3 -3.327 42.43 -4.902 1 33.48 ? C13 2JP 502 A 1 HETATM 15 C C11 2JP . . . C 3 -2.436 41.627 -3.963 1 33.21 ? C11 2JP 502 A 1 HETATM 16 C C9 2JP . . . C 3 -3.063 40.276 -3.642 1 33.65 ? C9 2JP 502 A 1 HETATM 17 O O3 2JP . . . C 3 -4.073 40.219 -2.894 1 35.31 ? O3 2JP 502 A 1 HETATM 18 O O1 2JP . . . C 3 -2.578 39.225 -4.133 1 34.16 ? O1 2JP 502 A 1 HETATM 19 H H1 2JP . . . C 3 -5.158 46.699 -2.997 1 48.19 ? H1 2JP 502 A 1 HETATM 20 H H2 2JP . . . C 3 -5.818 49.009 -2.337 1 56.78 ? H2 2JP 502 A 1 HETATM 21 H H3 2JP . . . C 3 -5.346 51.28 -2.313 1 58.73 ? H3 2JP 502 A 1 HETATM 22 H H4 2JP . . . C 3 -3.396 52.069 -3.294 1 59.44 ? H4 2JP 502 A 1 HETATM 23 H H5 2JP . . . C 3 -1.919 50.592 -4.298 1 58.25 ? H5 2JP 502 A 1 HETATM 24 H H6 2JP . . . C 3 -1.323 48.289 -4.92 1 46.15 ? H6 2JP 502 A 1 HETATM 25 H H7 2JP . . . C 3 -4.366 44.463 -3.52 1 41.08 ? H7 2JP 502 A 1 HETATM 26 H H8 2JP . . . C 3 -3.219 42.089 -5.803 1 40.24 ? H8 2JP 502 A 1 HETATM 27 H H9 2JP . . . C 3 -4.251 42.315 -4.63 1 40.24 ? H9 2JP 502 A 1 HETATM 28 H H10 2JP . . . C 3 -1.573 41.487 -4.383 1 39.91 ? H10 2JP 502 A 1 HETATM 29 H H11 2JP . . . C 3 -2.308 42.124 -3.14 1 39.91 ? H11 2JP 502 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 29 #