data_6YY7 # _model_server_result.job_id Ds9307zGiHSiP2RVasaK-Q _model_server_result.datetime_utc '2024-11-14 06:55:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yy7 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":305}' # _entry.id 6YY7 # _exptl.entry_id 6YY7 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 110.68 _cell.angle_gamma 90 _cell.entry_id 6YY7 _cell.length_a 47.682 _cell.length_b 64.753 _cell.length_c 48.013 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YY7 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6YY7 _atom_sites.fract_transf_matrix[1][1] 0.020972 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.007917 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015443 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.022262 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 Q0T A 1 301 1 Q0T LIG . C 3 SO4 A 1 302 1 SO4 SO4 . D 3 SO4 A 1 303 2 SO4 SO4 . E 4 EDO A 1 304 1 EDO EDO . F 4 EDO A 1 305 2 EDO EDO . G 5 HOH A 1 401 138 HOH HOH . G 5 HOH A 2 402 210 HOH HOH . G 5 HOH A 3 403 177 HOH HOH . G 5 HOH A 4 404 125 HOH HOH . G 5 HOH A 5 405 282 HOH HOH . G 5 HOH A 6 406 63 HOH HOH . G 5 HOH A 7 407 171 HOH HOH . G 5 HOH A 8 408 173 HOH HOH . G 5 HOH A 9 409 295 HOH HOH . G 5 HOH A 10 410 207 HOH HOH . G 5 HOH A 11 411 247 HOH HOH . G 5 HOH A 12 412 154 HOH HOH . G 5 HOH A 13 413 139 HOH HOH . G 5 HOH A 14 414 224 HOH HOH . G 5 HOH A 15 415 86 HOH HOH . G 5 HOH A 16 416 302 HOH HOH . G 5 HOH A 17 417 140 HOH HOH . G 5 HOH A 18 418 81 HOH HOH . G 5 HOH A 19 419 201 HOH HOH . G 5 HOH A 20 420 61 HOH HOH . G 5 HOH A 21 421 144 HOH HOH . G 5 HOH A 22 422 11 HOH HOH . G 5 HOH A 23 423 111 HOH HOH . G 5 HOH A 24 424 123 HOH HOH . G 5 HOH A 25 425 1 HOH HOH . G 5 HOH A 26 426 115 HOH HOH . G 5 HOH A 27 427 112 HOH HOH . G 5 HOH A 28 428 175 HOH HOH . G 5 HOH A 29 429 65 HOH HOH . G 5 HOH A 30 430 160 HOH HOH . G 5 HOH A 31 431 168 HOH HOH . G 5 HOH A 32 432 274 HOH HOH . G 5 HOH A 33 433 26 HOH HOH . G 5 HOH A 34 434 92 HOH HOH . G 5 HOH A 35 435 84 HOH HOH . G 5 HOH A 36 436 178 HOH HOH . G 5 HOH A 37 437 108 HOH HOH . G 5 HOH A 38 438 68 HOH HOH . G 5 HOH A 39 439 12 HOH HOH . G 5 HOH A 40 440 28 HOH HOH . G 5 HOH A 41 441 40 HOH HOH . G 5 HOH A 42 442 87 HOH HOH . G 5 HOH A 43 443 32 HOH HOH . G 5 HOH A 44 444 149 HOH HOH . G 5 HOH A 45 445 59 HOH HOH . G 5 HOH A 46 446 221 HOH HOH . G 5 HOH A 47 447 56 HOH HOH . G 5 HOH A 48 448 226 HOH HOH . G 5 HOH A 49 449 43 HOH HOH . G 5 HOH A 50 450 218 HOH HOH . G 5 HOH A 51 451 37 HOH HOH . G 5 HOH A 52 452 250 HOH HOH . G 5 HOH A 53 453 203 HOH HOH . G 5 HOH A 54 454 89 HOH HOH . G 5 HOH A 55 455 78 HOH HOH . G 5 HOH A 56 456 25 HOH HOH . G 5 HOH A 57 457 106 HOH HOH . G 5 HOH A 58 458 95 HOH HOH . G 5 HOH A 59 459 181 HOH HOH . G 5 HOH A 60 460 15 HOH HOH . G 5 HOH A 61 461 13 HOH HOH . G 5 HOH A 62 462 102 HOH HOH . G 5 HOH A 63 463 152 HOH HOH . G 5 HOH A 64 464 10 HOH HOH . G 5 HOH A 65 465 46 HOH HOH . G 5 HOH A 66 466 180 HOH HOH . G 5 HOH A 67 467 75 HOH HOH . G 5 HOH A 68 468 80 HOH HOH . G 5 HOH A 69 469 22 HOH HOH . G 5 HOH A 70 470 62 HOH HOH . G 5 HOH A 71 471 155 HOH HOH . G 5 HOH A 72 472 195 HOH HOH . G 5 HOH A 73 473 16 HOH HOH . G 5 HOH A 74 474 110 HOH HOH . G 5 HOH A 75 475 39 HOH HOH . G 5 HOH A 76 476 54 HOH HOH . G 5 HOH A 77 477 193 HOH HOH . G 5 HOH A 78 478 243 HOH HOH . G 5 HOH A 79 479 188 HOH HOH . G 5 HOH A 80 480 83 HOH HOH . G 5 HOH A 81 481 242 HOH HOH . G 5 HOH A 82 482 2 HOH HOH . G 5 HOH A 83 483 9 HOH HOH . G 5 HOH A 84 484 7 HOH HOH . G 5 HOH A 85 485 267 HOH HOH . G 5 HOH A 86 486 24 HOH HOH . G 5 HOH A 87 487 72 HOH HOH . G 5 HOH A 88 488 36 HOH HOH . G 5 HOH A 89 489 315 HOH HOH . G 5 HOH A 90 490 124 HOH HOH . G 5 HOH A 91 491 35 HOH HOH . G 5 HOH A 92 492 3 HOH HOH . G 5 HOH A 93 493 30 HOH HOH . G 5 HOH A 94 494 64 HOH HOH . G 5 HOH A 95 495 134 HOH HOH . G 5 HOH A 96 496 88 HOH HOH . G 5 HOH A 97 497 135 HOH HOH . G 5 HOH A 98 498 142 HOH HOH . G 5 HOH A 99 499 42 HOH HOH . G 5 HOH A 100 500 252 HOH HOH . G 5 HOH A 101 501 255 HOH HOH . G 5 HOH A 102 502 317 HOH HOH . G 5 HOH A 103 503 67 HOH HOH . G 5 HOH A 104 504 20 HOH HOH . G 5 HOH A 105 505 127 HOH HOH . G 5 HOH A 106 506 113 HOH HOH . G 5 HOH A 107 507 8 HOH HOH . G 5 HOH A 108 508 34 HOH HOH . G 5 HOH A 109 509 137 HOH HOH . G 5 HOH A 110 510 199 HOH HOH . G 5 HOH A 111 511 6 HOH HOH . G 5 HOH A 112 512 69 HOH HOH . G 5 HOH A 113 513 314 HOH HOH . G 5 HOH A 114 514 222 HOH HOH . G 5 HOH A 115 515 227 HOH HOH . G 5 HOH A 116 516 240 HOH HOH . G 5 HOH A 117 517 145 HOH HOH . G 5 HOH A 118 518 100 HOH HOH . G 5 HOH A 119 519 74 HOH HOH . G 5 HOH A 120 520 103 HOH HOH . G 5 HOH A 121 521 17 HOH HOH . G 5 HOH A 122 522 239 HOH HOH . G 5 HOH A 123 523 57 HOH HOH . G 5 HOH A 124 524 159 HOH HOH . G 5 HOH A 125 525 99 HOH HOH . G 5 HOH A 126 526 217 HOH HOH . G 5 HOH A 127 527 164 HOH HOH . G 5 HOH A 128 528 216 HOH HOH . G 5 HOH A 129 529 284 HOH HOH . G 5 HOH A 130 530 105 HOH HOH . G 5 HOH A 131 531 82 HOH HOH . G 5 HOH A 132 532 248 HOH HOH . G 5 HOH A 133 533 118 HOH HOH . G 5 HOH A 134 534 50 HOH HOH . G 5 HOH A 135 535 44 HOH HOH . G 5 HOH A 136 536 128 HOH HOH . G 5 HOH A 137 537 130 HOH HOH . G 5 HOH A 138 538 241 HOH HOH . G 5 HOH A 139 539 126 HOH HOH . G 5 HOH A 140 540 70 HOH HOH . G 5 HOH A 141 541 289 HOH HOH . G 5 HOH A 142 542 213 HOH HOH . G 5 HOH A 143 543 150 HOH HOH . G 5 HOH A 144 544 55 HOH HOH . G 5 HOH A 145 545 187 HOH HOH . G 5 HOH A 146 546 98 HOH HOH . G 5 HOH A 147 547 79 HOH HOH . G 5 HOH A 148 548 212 HOH HOH . G 5 HOH A 149 549 136 HOH HOH . G 5 HOH A 150 550 21 HOH HOH . G 5 HOH A 151 551 246 HOH HOH . G 5 HOH A 152 552 4 HOH HOH . G 5 HOH A 153 553 27 HOH HOH . G 5 HOH A 154 554 119 HOH HOH . G 5 HOH A 155 555 48 HOH HOH . G 5 HOH A 156 556 191 HOH HOH . G 5 HOH A 157 557 14 HOH HOH . G 5 HOH A 158 558 107 HOH HOH . G 5 HOH A 159 559 71 HOH HOH . G 5 HOH A 160 560 269 HOH HOH . G 5 HOH A 161 561 5 HOH HOH . G 5 HOH A 162 562 189 HOH HOH . G 5 HOH A 163 563 19 HOH HOH . G 5 HOH A 164 564 280 HOH HOH . G 5 HOH A 165 565 132 HOH HOH . G 5 HOH A 166 566 206 HOH HOH . G 5 HOH A 167 567 76 HOH HOH . G 5 HOH A 168 568 45 HOH HOH . G 5 HOH A 169 569 33 HOH HOH . G 5 HOH A 170 570 58 HOH HOH . G 5 HOH A 171 571 205 HOH HOH . G 5 HOH A 172 572 245 HOH HOH . G 5 HOH A 173 573 169 HOH HOH . G 5 HOH A 174 574 91 HOH HOH . G 5 HOH A 175 575 293 HOH HOH . G 5 HOH A 176 576 23 HOH HOH . G 5 HOH A 177 577 85 HOH HOH . G 5 HOH A 178 578 305 HOH HOH . G 5 HOH A 179 579 219 HOH HOH . G 5 HOH A 180 580 283 HOH HOH . G 5 HOH A 181 581 257 HOH HOH . G 5 HOH A 182 582 121 HOH HOH . G 5 HOH A 183 583 73 HOH HOH . G 5 HOH A 184 584 38 HOH HOH . G 5 HOH A 185 585 49 HOH HOH . G 5 HOH A 186 586 52 HOH HOH . G 5 HOH A 187 587 179 HOH HOH . G 5 HOH A 188 588 51 HOH HOH . G 5 HOH A 189 589 225 HOH HOH . G 5 HOH A 190 590 204 HOH HOH . G 5 HOH A 191 591 196 HOH HOH . G 5 HOH A 192 592 310 HOH HOH . G 5 HOH A 193 593 266 HOH HOH . G 5 HOH A 194 594 192 HOH HOH . G 5 HOH A 195 595 307 HOH HOH . G 5 HOH A 196 596 290 HOH HOH . G 5 HOH A 197 597 264 HOH HOH . G 5 HOH A 198 598 286 HOH HOH . G 5 HOH A 199 599 194 HOH HOH . G 5 HOH A 200 600 29 HOH HOH . G 5 HOH A 201 601 300 HOH HOH . G 5 HOH A 202 602 90 HOH HOH . G 5 HOH A 203 603 18 HOH HOH . G 5 HOH A 204 604 272 HOH HOH . G 5 HOH A 205 605 161 HOH HOH . G 5 HOH A 206 606 77 HOH HOH . G 5 HOH A 207 607 53 HOH HOH . G 5 HOH A 208 608 133 HOH HOH . G 5 HOH A 209 609 109 HOH HOH . G 5 HOH A 210 610 120 HOH HOH . G 5 HOH A 211 611 260 HOH HOH . G 5 HOH A 212 612 116 HOH HOH . G 5 HOH A 213 613 299 HOH HOH . G 5 HOH A 214 614 143 HOH HOH . G 5 HOH A 215 615 165 HOH HOH . G 5 HOH A 216 616 47 HOH HOH . G 5 HOH A 217 617 41 HOH HOH . G 5 HOH A 218 618 94 HOH HOH . G 5 HOH A 219 619 271 HOH HOH . G 5 HOH A 220 620 131 HOH HOH . G 5 HOH A 221 621 184 HOH HOH . G 5 HOH A 222 622 60 HOH HOH . G 5 HOH A 223 623 262 HOH HOH . G 5 HOH A 224 624 185 HOH HOH . G 5 HOH A 225 625 211 HOH HOH . G 5 HOH A 226 626 258 HOH HOH . G 5 HOH A 227 627 309 HOH HOH . G 5 HOH A 228 628 275 HOH HOH . G 5 HOH A 229 629 249 HOH HOH . G 5 HOH A 230 630 316 HOH HOH . G 5 HOH A 231 631 265 HOH HOH . G 5 HOH A 232 632 101 HOH HOH . G 5 HOH A 233 633 297 HOH HOH . G 5 HOH A 234 634 306 HOH HOH . G 5 HOH A 235 635 176 HOH HOH . G 5 HOH A 236 636 96 HOH HOH . G 5 HOH A 237 637 291 HOH HOH . G 5 HOH A 238 638 170 HOH HOH . G 5 HOH A 239 639 303 HOH HOH . G 5 HOH A 240 640 147 HOH HOH . G 5 HOH A 241 641 268 HOH HOH . G 5 HOH A 242 642 66 HOH HOH . G 5 HOH A 243 643 232 HOH HOH . G 5 HOH A 244 644 228 HOH HOH . G 5 HOH A 245 645 238 HOH HOH . G 5 HOH A 246 646 254 HOH HOH . G 5 HOH A 247 647 172 HOH HOH . G 5 HOH A 248 648 158 HOH HOH . G 5 HOH A 249 649 163 HOH HOH . G 5 HOH A 250 650 146 HOH HOH . G 5 HOH A 251 651 202 HOH HOH . G 5 HOH A 252 652 104 HOH HOH . G 5 HOH A 253 653 214 HOH HOH . G 5 HOH A 254 654 235 HOH HOH . G 5 HOH A 255 655 253 HOH HOH . G 5 HOH A 256 656 208 HOH HOH . G 5 HOH A 257 657 287 HOH HOH . G 5 HOH A 258 658 256 HOH HOH . G 5 HOH A 259 659 114 HOH HOH . G 5 HOH A 260 660 186 HOH HOH . G 5 HOH A 261 661 183 HOH HOH . G 5 HOH A 262 662 312 HOH HOH . G 5 HOH A 263 663 231 HOH HOH . G 5 HOH A 264 664 157 HOH HOH . G 5 HOH A 265 665 273 HOH HOH . G 5 HOH A 266 666 263 HOH HOH . G 5 HOH A 267 667 236 HOH HOH . G 5 HOH A 268 668 93 HOH HOH . G 5 HOH A 269 669 166 HOH HOH . G 5 HOH A 270 670 31 HOH HOH . G 5 HOH A 271 671 97 HOH HOH . G 5 HOH A 272 672 151 HOH HOH . G 5 HOH A 273 673 285 HOH HOH . G 5 HOH A 274 674 294 HOH HOH . G 5 HOH A 275 675 296 HOH HOH . G 5 HOH A 276 676 292 HOH HOH . G 5 HOH A 277 677 198 HOH HOH . G 5 HOH A 278 678 200 HOH HOH . G 5 HOH A 279 679 162 HOH HOH . G 5 HOH A 280 680 156 HOH HOH . G 5 HOH A 281 681 234 HOH HOH . G 5 HOH A 282 682 308 HOH HOH . G 5 HOH A 283 683 313 HOH HOH . G 5 HOH A 284 684 301 HOH HOH . G 5 HOH A 285 685 304 HOH HOH . G 5 HOH A 286 686 311 HOH HOH . G 5 HOH A 287 687 229 HOH HOH . G 5 HOH A 288 688 117 HOH HOH . G 5 HOH A 289 689 298 HOH HOH . G 5 HOH A 290 690 244 HOH HOH . G 5 HOH A 291 691 276 HOH HOH . G 5 HOH A 292 692 209 HOH HOH . G 5 HOH A 293 693 190 HOH HOH . G 5 HOH A 294 694 220 HOH HOH . G 5 HOH A 295 695 174 HOH HOH . G 5 HOH A 296 696 278 HOH HOH . G 5 HOH A 297 697 122 HOH HOH . G 5 HOH A 298 698 141 HOH HOH . G 5 HOH A 299 699 129 HOH HOH . G 5 HOH A 300 700 230 HOH HOH . G 5 HOH A 301 701 153 HOH HOH . G 5 HOH A 302 702 182 HOH HOH . G 5 HOH A 303 703 237 HOH HOH . G 5 HOH A 304 704 279 HOH HOH . G 5 HOH A 305 705 261 HOH HOH . G 5 HOH A 306 706 251 HOH HOH . G 5 HOH A 307 707 148 HOH HOH . G 5 HOH A 308 708 270 HOH HOH . G 5 HOH A 309 709 277 HOH HOH . G 5 HOH A 310 710 259 HOH HOH . G 5 HOH A 311 711 288 HOH HOH . G 5 HOH A 312 712 167 HOH HOH . G 5 HOH A 313 713 233 HOH HOH . G 5 HOH A 314 714 281 HOH HOH . G 5 HOH A 315 715 215 HOH HOH . G 5 HOH A 316 716 197 HOH HOH . G 5 HOH A 317 717 223 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . F 4 16.83 3.105 46.619 1 17.63 ? C1 EDO 305 A 1 HETATM 2 O O1 EDO . . . F 4 17.779 2.301 47.345 1 19.24 ? O1 EDO 305 A 1 HETATM 3 C C2 EDO . . . F 4 15.944 3.844 47.61 1 18 ? C2 EDO 305 A 1 HETATM 4 O O2 EDO . . . F 4 16.759 4.769 48.351 1 23.97 ? O2 EDO 305 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 365 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #