data_6YYH # _model_server_result.job_id P7wfBqdqYw0j9F7MXawSmg _model_server_result.datetime_utc '2024-10-19 16:27:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yyh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6YYH # _exptl.entry_id 6YYH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6YYH _cell.length_a 159.14 _cell.length_b 159.14 _cell.length_c 100.15 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YYH _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 6YYH _atom_sites.fract_transf_matrix[1][1] 0.006284 _atom_sites.fract_transf_matrix[1][2] 0.003628 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007256 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009985 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CIT A 1 601 601 CIT CIT . D 3 EDO A 1 602 701 EDO EDO . E 4 SO4 A 1 603 1 SO4 SO4 . F 4 SO4 B 1 601 2 SO4 SO4 . G 5 HOH A 1 701 22 HOH HOH . G 5 HOH A 2 702 25 HOH HOH . G 5 HOH A 3 703 27 HOH HOH . G 5 HOH A 4 704 21 HOH HOH . G 5 HOH A 5 705 35 HOH HOH . G 5 HOH A 6 706 15 HOH HOH . G 5 HOH A 7 707 6 HOH HOH . G 5 HOH A 8 708 11 HOH HOH . G 5 HOH A 9 709 30 HOH HOH . G 5 HOH A 10 710 7 HOH HOH . G 5 HOH A 11 711 4 HOH HOH . G 5 HOH A 12 712 5 HOH HOH . G 5 HOH A 13 713 9 HOH HOH . G 5 HOH A 14 714 16 HOH HOH . G 5 HOH A 15 715 33 HOH HOH . G 5 HOH A 16 716 1 HOH HOH . G 5 HOH A 17 717 14 HOH HOH . G 5 HOH A 18 718 19 HOH HOH . G 5 HOH A 19 719 24 HOH HOH . G 5 HOH A 20 720 26 HOH HOH . G 5 HOH A 21 721 13 HOH HOH . G 5 HOH A 22 722 28 HOH HOH . H 5 HOH B 1 701 12 HOH HOH . H 5 HOH B 2 702 10 HOH HOH . H 5 HOH B 3 703 34 HOH HOH . H 5 HOH B 4 704 3 HOH HOH . H 5 HOH B 5 705 32 HOH HOH . H 5 HOH B 6 706 20 HOH HOH . H 5 HOH B 7 707 8 HOH HOH . H 5 HOH B 8 708 17 HOH HOH . H 5 HOH B 9 709 31 HOH HOH . H 5 HOH B 10 710 23 HOH HOH . H 5 HOH B 11 711 18 HOH HOH . H 5 HOH B 12 712 2 HOH HOH . H 5 HOH B 13 713 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . C 2 -11.341 76.62 -8.84 1 83.98 ? C1 CIT 601 A 1 HETATM 2 O O1 CIT . . . C 2 -12.529 76.236 -8.865 1 75.99 ? O1 CIT 601 A 1 HETATM 3 O O2 CIT . . . C 2 -11.103 77.793 -8.41 1 83.75 ? O2 CIT 601 A 1 HETATM 4 C C2 CIT . . . C 2 -10.234 75.67 -9.303 1 76.76 ? C2 CIT 601 A 1 HETATM 5 C C3 CIT . . . C 2 -10.337 75.189 -10.765 1 80.05 ? C3 CIT 601 A 1 HETATM 6 O O7 CIT . . . C 2 -10.815 76.286 -11.594 1 81.35 ? O7 CIT 601 A 1 HETATM 7 C C4 CIT . . . C 2 -8.966 74.7 -11.259 1 78.86 ? C4 CIT 601 A 1 HETATM 8 C C5 CIT . . . C 2 -8.253 75.565 -12.292 1 81.42 ? C5 CIT 601 A 1 HETATM 9 O O3 CIT . . . C 2 -8.69 75.716 -13.465 1 74.53 ? O3 CIT 601 A 1 HETATM 10 O O4 CIT . . . C 2 -7.167 76.118 -11.989 1 72.98 ? O4 CIT 601 A 1 HETATM 11 C C6 CIT . . . C 2 -11.27 73.973 -10.888 1 83.7 ? C6 CIT 601 A 1 HETATM 12 O O5 CIT . . . C 2 -10.989 73.045 -11.69 1 76.48 ? O5 CIT 601 A 1 HETATM 13 O O6 CIT . . . C 2 -12.316 73.846 -10.204 1 82.39 ? O6 CIT 601 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 346 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 13 #