data_6YYI
#
_model_server_result.job_id            S6QT7LR_9aFb5b4xy4QLJQ 
_model_server_result.datetime_utc      '2024-11-12 20:40:59' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6yyi 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"O","auth_seq_id":704}' 
#
_entry.id    6YYI 
#
_exptl.entry_id    6YYI 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6YYI 
_cell.length_a            160.95 
_cell.length_b            160.95 
_cell.length_c            103.63 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6YYI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        152 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 31 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 L N N 
? 2 M N N 
? 2 N N N 
? 2 O N N 
? 2 Q N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 103 n n 
C1 C2 EDO sing 104 n n 
C1 H11 EDO sing 105 n n 
C1 H12 EDO sing 106 n n 
O1 HO1 EDO sing 107 n n 
C2 O2 EDO sing 108 n n 
C2 H21 EDO sing 109 n n 
C2 H22 EDO sing 110 n n 
O2 HO2 EDO sing 111 n n 
#
_atom_sites.entry_id                     6YYI 
_atom_sites.fract_transf_matrix[1][1]    0.006213 
_atom_sites.fract_transf_matrix[1][2]    0.003587 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007174 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.00965 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 EDO A 1 701 701 EDO EDO . 
D 2 EDO A 1 702 801 EDO EDO . 
E 2 EDO A 1 703 901 EDO EDO . 
F 2 EDO A 1 704 1001 EDO EDO . 
G 3 CIT A 1 705 1101 CIT CIT . 
H 2 EDO A 1 706 1201 EDO EDO . 
I 2 EDO A 1 707 1301 EDO EDO . 
J 2 EDO A 1 708 1401 EDO EDO . 
K 4 SO4 A 1 709 1 SO4 SO4 . 
L 2 EDO B 1 701 701 EDO EDO . 
M 2 EDO B 1 702 901 EDO EDO . 
N 2 EDO B 1 703 1001 EDO EDO . 
O 2 EDO B 1 704 1101 EDO EDO . 
P 5 XYP B 1 705 1201 XYP XYP . 
Q 2 EDO B 1 706 1301 EDO EDO . 
R 4 SO4 B 1 707 2 SO4 SO4 . 
S 6 NA B 1 708 1 NA NA . 
T 6 NA B 1 709 2 NA NA . 
U 7 HOH A 1 801 9 HOH HOH . 
U 7 HOH A 2 802 82 HOH HOH . 
U 7 HOH A 3 803 60 HOH HOH . 
U 7 HOH A 4 804 14 HOH HOH . 
U 7 HOH A 5 805 73 HOH HOH . 
U 7 HOH A 6 806 13 HOH HOH . 
U 7 HOH A 7 807 44 HOH HOH . 
U 7 HOH A 8 808 85 HOH HOH . 
U 7 HOH A 9 809 58 HOH HOH . 
U 7 HOH A 10 810 6 HOH HOH . 
U 7 HOH A 11 811 83 HOH HOH . 
U 7 HOH A 12 812 88 HOH HOH . 
U 7 HOH A 13 813 34 HOH HOH . 
U 7 HOH A 14 814 10 HOH HOH . 
U 7 HOH A 15 815 56 HOH HOH . 
U 7 HOH A 16 816 23 HOH HOH . 
U 7 HOH A 17 817 66 HOH HOH . 
U 7 HOH A 18 818 78 HOH HOH . 
U 7 HOH A 19 819 65 HOH HOH . 
U 7 HOH A 20 820 5 HOH HOH . 
U 7 HOH A 21 821 42 HOH HOH . 
U 7 HOH A 22 822 35 HOH HOH . 
U 7 HOH A 23 823 90 HOH HOH . 
U 7 HOH A 24 824 79 HOH HOH . 
U 7 HOH A 25 825 41 HOH HOH . 
U 7 HOH A 26 826 3 HOH HOH . 
U 7 HOH A 27 827 29 HOH HOH . 
U 7 HOH A 28 828 52 HOH HOH . 
U 7 HOH A 29 829 28 HOH HOH . 
U 7 HOH A 30 830 70 HOH HOH . 
U 7 HOH A 31 831 87 HOH HOH . 
U 7 HOH A 32 832 8 HOH HOH . 
U 7 HOH A 33 833 27 HOH HOH . 
U 7 HOH A 34 834 89 HOH HOH . 
U 7 HOH A 35 835 61 HOH HOH . 
U 7 HOH A 36 836 18 HOH HOH . 
U 7 HOH A 37 837 39 HOH HOH . 
U 7 HOH A 38 838 84 HOH HOH . 
U 7 HOH A 39 839 68 HOH HOH . 
V 7 HOH B 1 801 20 HOH HOH . 
V 7 HOH B 2 802 57 HOH HOH . 
V 7 HOH B 3 803 80 HOH HOH . 
V 7 HOH B 4 804 76 HOH HOH . 
V 7 HOH B 5 805 64 HOH HOH . 
V 7 HOH B 6 806 91 HOH HOH . 
V 7 HOH B 7 807 48 HOH HOH . 
V 7 HOH B 8 808 75 HOH HOH . 
V 7 HOH B 9 809 71 HOH HOH . 
V 7 HOH B 10 810 12 HOH HOH . 
V 7 HOH B 11 811 50 HOH HOH . 
V 7 HOH B 12 812 17 HOH HOH . 
V 7 HOH B 13 813 62 HOH HOH . 
V 7 HOH B 14 814 43 HOH HOH . 
V 7 HOH B 15 815 36 HOH HOH . 
V 7 HOH B 16 816 31 HOH HOH . 
V 7 HOH B 17 817 77 HOH HOH . 
V 7 HOH B 18 818 49 HOH HOH . 
V 7 HOH B 19 819 4 HOH HOH . 
V 7 HOH B 20 820 53 HOH HOH . 
V 7 HOH B 21 821 45 HOH HOH . 
V 7 HOH B 22 822 74 HOH HOH . 
V 7 HOH B 23 823 25 HOH HOH . 
V 7 HOH B 24 824 33 HOH HOH . 
V 7 HOH B 25 825 86 HOH HOH . 
V 7 HOH B 26 826 54 HOH HOH . 
V 7 HOH B 27 827 69 HOH HOH . 
V 7 HOH B 28 828 19 HOH HOH . 
V 7 HOH B 29 829 37 HOH HOH . 
V 7 HOH B 30 830 16 HOH HOH . 
V 7 HOH B 31 831 72 HOH HOH . 
V 7 HOH B 32 832 81 HOH HOH . 
V 7 HOH B 33 833 67 HOH HOH . 
V 7 HOH B 34 834 46 HOH HOH . 
V 7 HOH B 35 835 30 HOH HOH . 
V 7 HOH B 36 836 40 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . O 2 45.843 -26.27 19.526 1 52.38 ? C1 EDO 704 B 1 
HETATM 2 O O1 EDO . . . O 2 46.399 -25.048 20.046 1 60.85 ? O1 EDO 704 B 1 
HETATM 3 C C2 EDO . . . O 2 44.444 -25.951 19.028 1 56.73 ? C2 EDO 704 B 1 
HETATM 4 O O2 EDO . . . O 2 44.441 -24.551 18.692 1 68.17 ? O2 EDO 704 B 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           19 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           237 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
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