data_6YZ1 # _model_server_result.job_id ZnD5Cr5P_Haz9IJtS2QGqg _model_server_result.datetime_utc '2024-11-01 11:21:08' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yz1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 6YZ1 # _exptl.entry_id 6YZ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6YZ1 _cell.length_a 168.49 _cell.length_b 168.49 _cell.length_c 52.1 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YZ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 E N N ? 5 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B SG CYS 66 B CYS 74 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.288 ? metalc ? metalc2 B SG CYS 69 B CYS 77 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.329 ? metalc ? metalc3 B NE2 HIS 75 B HIS 83 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc4 B SG CYS 82 B CYS 90 1_555 E ZN ZN . B ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.3 ? metalc ? metalc5 B SG CYS 109 B CYS 117 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.314 ? metalc ? metalc6 B SG CYS 112 B CYS 120 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? metalc ? metalc7 B SG CYS 120 B CYS 128 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.312 ? metalc ? metalc8 B SG CYS 122 B CYS 130 1_555 F ZN ZN . B ZN 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6YZ1 _atom_sites.fract_transf_matrix[1][1] 0.005935 _atom_sites.fract_transf_matrix[1][2] 0.003427 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006853 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.019194 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SFG A 1 301 1 SFG SFG . D 4 MES A 1 302 2 MES MES . E 5 ZN B 1 201 1 ZN ZN . F 5 ZN B 1 202 2 ZN ZN . G 6 HOH A 1 401 24 HOH HOH . G 6 HOH A 2 402 41 HOH HOH . G 6 HOH A 3 403 58 HOH HOH . G 6 HOH A 4 404 181 HOH HOH . G 6 HOH A 5 405 183 HOH HOH . G 6 HOH A 6 406 73 HOH HOH . G 6 HOH A 7 407 52 HOH HOH . G 6 HOH A 8 408 200 HOH HOH . G 6 HOH A 9 409 81 HOH HOH . G 6 HOH A 10 410 14 HOH HOH . G 6 HOH A 11 411 136 HOH HOH . G 6 HOH A 12 412 123 HOH HOH . G 6 HOH A 13 413 10 HOH HOH . G 6 HOH A 14 414 71 HOH HOH . G 6 HOH A 15 415 7 HOH HOH . G 6 HOH A 16 416 4 HOH HOH . G 6 HOH A 17 417 32 HOH HOH . G 6 HOH A 18 418 38 HOH HOH . G 6 HOH A 19 419 178 HOH HOH . G 6 HOH A 20 420 5 HOH HOH . G 6 HOH A 21 421 8 HOH HOH . G 6 HOH A 22 422 189 HOH HOH . G 6 HOH A 23 423 37 HOH HOH . G 6 HOH A 24 424 90 HOH HOH . G 6 HOH A 25 425 202 HOH HOH . G 6 HOH A 26 426 138 HOH HOH . G 6 HOH A 27 427 116 HOH HOH . G 6 HOH A 28 428 120 HOH HOH . G 6 HOH A 29 429 21 HOH HOH . G 6 HOH A 30 430 11 HOH HOH . G 6 HOH A 31 431 69 HOH HOH . G 6 HOH A 32 432 133 HOH HOH . G 6 HOH A 33 433 51 HOH HOH . G 6 HOH A 34 434 18 HOH HOH . G 6 HOH A 35 435 30 HOH HOH . G 6 HOH A 36 436 83 HOH HOH . G 6 HOH A 37 437 2 HOH HOH . G 6 HOH A 38 438 40 HOH HOH . G 6 HOH A 39 439 118 HOH HOH . G 6 HOH A 40 440 166 HOH HOH . G 6 HOH A 41 441 80 HOH HOH . G 6 HOH A 42 442 108 HOH HOH . G 6 HOH A 43 443 145 HOH HOH . G 6 HOH A 44 444 35 HOH HOH . G 6 HOH A 45 445 124 HOH HOH . G 6 HOH A 46 446 1 HOH HOH . G 6 HOH A 47 447 258 HOH HOH . G 6 HOH A 48 448 91 HOH HOH . G 6 HOH A 49 449 50 HOH HOH . G 6 HOH A 50 450 48 HOH HOH . G 6 HOH A 51 451 63 HOH HOH . G 6 HOH A 52 452 155 HOH HOH . G 6 HOH A 53 453 250 HOH HOH . G 6 HOH A 54 454 180 HOH HOH . G 6 HOH A 55 455 45 HOH HOH . G 6 HOH A 56 456 65 HOH HOH . G 6 HOH A 57 457 43 HOH HOH . G 6 HOH A 58 458 46 HOH HOH . G 6 HOH A 59 459 29 HOH HOH . G 6 HOH A 60 460 203 HOH HOH . G 6 HOH A 61 461 26 HOH HOH . G 6 HOH A 62 462 106 HOH HOH . G 6 HOH A 63 463 105 HOH HOH . G 6 HOH A 64 464 128 HOH HOH . G 6 HOH A 65 465 23 HOH HOH . G 6 HOH A 66 466 159 HOH HOH . G 6 HOH A 67 467 70 HOH HOH . G 6 HOH A 68 468 3 HOH HOH . G 6 HOH A 69 469 236 HOH HOH . G 6 HOH A 70 470 79 HOH HOH . G 6 HOH A 71 471 103 HOH HOH . G 6 HOH A 72 472 20 HOH HOH . G 6 HOH A 73 473 6 HOH HOH . G 6 HOH A 74 474 72 HOH HOH . G 6 HOH A 75 475 102 HOH HOH . G 6 HOH A 76 476 85 HOH HOH . G 6 HOH A 77 477 76 HOH HOH . G 6 HOH A 78 478 59 HOH HOH . G 6 HOH A 79 479 196 HOH HOH . G 6 HOH A 80 480 31 HOH HOH . G 6 HOH A 81 481 195 HOH HOH . G 6 HOH A 82 482 131 HOH HOH . G 6 HOH A 83 483 121 HOH HOH . G 6 HOH A 84 484 114 HOH HOH . G 6 HOH A 85 485 96 HOH HOH . G 6 HOH A 86 486 97 HOH HOH . G 6 HOH A 87 487 109 HOH HOH . G 6 HOH A 88 488 172 HOH HOH . G 6 HOH A 89 489 150 HOH HOH . G 6 HOH A 90 490 64 HOH HOH . G 6 HOH A 91 491 66 HOH HOH . G 6 HOH A 92 492 255 HOH HOH . G 6 HOH A 93 493 188 HOH HOH . G 6 HOH A 94 494 251 HOH HOH . G 6 HOH A 95 495 160 HOH HOH . G 6 HOH A 96 496 98 HOH HOH . G 6 HOH A 97 497 234 HOH HOH . G 6 HOH A 98 498 161 HOH HOH . G 6 HOH A 99 499 209 HOH HOH . G 6 HOH A 100 500 68 HOH HOH . G 6 HOH A 101 501 19 HOH HOH . G 6 HOH A 102 502 125 HOH HOH . G 6 HOH A 103 503 192 HOH HOH . G 6 HOH A 104 504 248 HOH HOH . G 6 HOH A 105 505 223 HOH HOH . G 6 HOH A 106 506 122 HOH HOH . G 6 HOH A 107 507 87 HOH HOH . G 6 HOH A 108 508 154 HOH HOH . G 6 HOH A 109 509 207 HOH HOH . G 6 HOH A 110 510 238 HOH HOH . G 6 HOH A 111 511 146 HOH HOH . G 6 HOH A 112 512 147 HOH HOH . G 6 HOH A 113 513 152 HOH HOH . G 6 HOH A 114 514 88 HOH HOH . G 6 HOH A 115 515 246 HOH HOH . G 6 HOH A 116 516 170 HOH HOH . G 6 HOH A 117 517 74 HOH HOH . G 6 HOH A 118 518 112 HOH HOH . G 6 HOH A 119 519 175 HOH HOH . G 6 HOH A 120 520 55 HOH HOH . G 6 HOH A 121 521 130 HOH HOH . G 6 HOH A 122 522 33 HOH HOH . G 6 HOH A 123 523 221 HOH HOH . G 6 HOH A 124 524 254 HOH HOH . G 6 HOH A 125 525 44 HOH HOH . G 6 HOH A 126 526 9 HOH HOH . G 6 HOH A 127 527 144 HOH HOH . G 6 HOH A 128 528 16 HOH HOH . G 6 HOH A 129 529 247 HOH HOH . G 6 HOH A 130 530 86 HOH HOH . G 6 HOH A 131 531 111 HOH HOH . G 6 HOH A 132 532 230 HOH HOH . G 6 HOH A 133 533 176 HOH HOH . G 6 HOH A 134 534 67 HOH HOH . G 6 HOH A 135 535 78 HOH HOH . G 6 HOH A 136 536 260 HOH HOH . G 6 HOH A 137 537 115 HOH HOH . G 6 HOH A 138 538 256 HOH HOH . G 6 HOH A 139 539 113 HOH HOH . G 6 HOH A 140 540 34 HOH HOH . G 6 HOH A 141 541 219 HOH HOH . G 6 HOH A 142 542 184 HOH HOH . G 6 HOH A 143 543 17 HOH HOH . G 6 HOH A 144 544 134 HOH HOH . G 6 HOH A 145 545 210 HOH HOH . G 6 HOH A 146 546 28 HOH HOH . G 6 HOH A 147 547 140 HOH HOH . G 6 HOH A 148 548 47 HOH HOH . G 6 HOH A 149 549 198 HOH HOH . G 6 HOH A 150 550 186 HOH HOH . G 6 HOH A 151 551 107 HOH HOH . G 6 HOH A 152 552 62 HOH HOH . G 6 HOH A 153 553 243 HOH HOH . G 6 HOH A 154 554 104 HOH HOH . G 6 HOH A 155 555 235 HOH HOH . G 6 HOH A 156 556 187 HOH HOH . G 6 HOH A 157 557 42 HOH HOH . G 6 HOH A 158 558 94 HOH HOH . G 6 HOH A 159 559 232 HOH HOH . G 6 HOH A 160 560 77 HOH HOH . G 6 HOH A 161 561 241 HOH HOH . G 6 HOH A 162 562 252 HOH HOH . G 6 HOH A 163 563 156 HOH HOH . G 6 HOH A 164 564 208 HOH HOH . G 6 HOH A 165 565 194 HOH HOH . G 6 HOH A 166 566 165 HOH HOH . G 6 HOH A 167 567 177 HOH HOH . G 6 HOH A 168 568 253 HOH HOH . G 6 HOH A 169 569 257 HOH HOH . G 6 HOH A 170 570 25 HOH HOH . G 6 HOH A 171 571 262 HOH HOH . G 6 HOH A 172 572 151 HOH HOH . G 6 HOH A 173 573 75 HOH HOH . G 6 HOH A 174 574 93 HOH HOH . G 6 HOH A 175 575 214 HOH HOH . G 6 HOH A 176 576 163 HOH HOH . G 6 HOH A 177 577 153 HOH HOH . G 6 HOH A 178 578 199 HOH HOH . G 6 HOH A 179 579 259 HOH HOH . G 6 HOH A 180 580 212 HOH HOH . G 6 HOH A 181 581 135 HOH HOH . G 6 HOH A 182 582 237 HOH HOH . G 6 HOH A 183 583 149 HOH HOH . G 6 HOH A 184 584 226 HOH HOH . G 6 HOH A 185 585 137 HOH HOH . G 6 HOH A 186 586 240 HOH HOH . G 6 HOH A 187 587 164 HOH HOH . G 6 HOH A 188 588 191 HOH HOH . G 6 HOH A 189 589 53 HOH HOH . G 6 HOH A 190 590 127 HOH HOH . G 6 HOH A 191 591 224 HOH HOH . G 6 HOH A 192 592 261 HOH HOH . G 6 HOH A 193 593 227 HOH HOH . G 6 HOH A 194 594 215 HOH HOH . G 6 HOH A 195 595 217 HOH HOH . G 6 HOH A 196 596 190 HOH HOH . G 6 HOH A 197 597 218 HOH HOH . G 6 HOH A 198 598 167 HOH HOH . G 6 HOH A 199 599 179 HOH HOH . G 6 HOH A 200 600 213 HOH HOH . G 6 HOH A 201 601 220 HOH HOH . G 6 HOH A 202 602 139 HOH HOH . G 6 HOH A 203 603 229 HOH HOH . G 6 HOH A 204 604 228 HOH HOH . H 6 HOH B 1 301 171 HOH HOH . H 6 HOH B 2 302 100 HOH HOH . H 6 HOH B 3 303 82 HOH HOH . H 6 HOH B 4 304 182 HOH HOH . H 6 HOH B 5 305 27 HOH HOH . H 6 HOH B 6 306 193 HOH HOH . H 6 HOH B 7 307 117 HOH HOH . H 6 HOH B 8 308 54 HOH HOH . H 6 HOH B 9 309 36 HOH HOH . H 6 HOH B 10 310 101 HOH HOH . H 6 HOH B 11 311 22 HOH HOH . H 6 HOH B 12 312 13 HOH HOH . H 6 HOH B 13 313 56 HOH HOH . H 6 HOH B 14 314 222 HOH HOH . H 6 HOH B 15 315 92 HOH HOH . H 6 HOH B 16 316 129 HOH HOH . H 6 HOH B 17 317 15 HOH HOH . H 6 HOH B 18 318 141 HOH HOH . H 6 HOH B 19 319 95 HOH HOH . H 6 HOH B 20 320 84 HOH HOH . H 6 HOH B 21 321 216 HOH HOH . H 6 HOH B 22 322 157 HOH HOH . H 6 HOH B 23 323 169 HOH HOH . H 6 HOH B 24 324 126 HOH HOH . H 6 HOH B 25 325 174 HOH HOH . H 6 HOH B 26 326 185 HOH HOH . H 6 HOH B 27 327 89 HOH HOH . H 6 HOH B 28 328 143 HOH HOH . H 6 HOH B 29 329 205 HOH HOH . H 6 HOH B 30 330 132 HOH HOH . H 6 HOH B 31 331 39 HOH HOH . H 6 HOH B 32 332 49 HOH HOH . H 6 HOH B 33 333 119 HOH HOH . H 6 HOH B 34 334 204 HOH HOH . H 6 HOH B 35 335 57 HOH HOH . H 6 HOH B 36 336 12 HOH HOH . H 6 HOH B 37 337 162 HOH HOH . H 6 HOH B 38 338 148 HOH HOH . H 6 HOH B 39 339 206 HOH HOH . H 6 HOH B 40 340 211 HOH HOH . H 6 HOH B 41 341 142 HOH HOH . H 6 HOH B 42 342 197 HOH HOH . H 6 HOH B 43 343 61 HOH HOH . H 6 HOH B 44 344 110 HOH HOH . H 6 HOH B 45 345 173 HOH HOH . H 6 HOH B 46 346 60 HOH HOH . H 6 HOH B 47 347 158 HOH HOH . H 6 HOH B 48 348 239 HOH HOH . H 6 HOH B 49 349 99 HOH HOH . H 6 HOH B 50 350 201 HOH HOH . H 6 HOH B 51 351 244 HOH HOH . H 6 HOH B 52 352 249 HOH HOH . H 6 HOH B 53 353 245 HOH HOH . H 6 HOH B 54 354 168 HOH HOH . H 6 HOH B 55 355 225 HOH HOH . H 6 HOH B 56 356 231 HOH HOH . H 6 HOH B 57 357 233 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 5 _atom_site.Cartn_x 71.193 _atom_site.Cartn_y 9.233 _atom_site.Cartn_z 10.964 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 41.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 201 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 1 #