data_6YZM # _model_server_result.job_id KkzAwRIhnofRYCeABmWVKw _model_server_result.datetime_utc '2024-11-17 04:57:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6yzm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6YZM # _exptl.entry_id 6YZM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 271.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'Carborane nido-pentyl-sulfonamide' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 103.65 _cell.angle_gamma 90 _cell.entry_id 6YZM _cell.length_a 41.666 _cell.length_b 41.001 _cell.length_c 71.212 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6YZM _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 94 A HIS 94 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc2 A NE2 HIS 96 A HIS 96 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? metalc ? metalc3 A ND1 HIS 119 A HIS 119 1_555 B ZN ZN . A ZN 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc4 B ZN ZN . A ZN 301 1_555 C N4 Q4B . A Q4B 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.06 ? # _chem_comp.formula 'C7 H12 B9 N O2 S' _chem_comp.formula_weight 271.54 _chem_comp.id Q4B _chem_comp.mon_nstd_flag . _chem_comp.name 'Carborane nido-pentyl-sulfonamide' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O11 S8 Q4B doub 277 n n S8 O5 Q4B doub 278 n n S8 N4 Q4B sing 279 n n S8 C6 Q4B sing 280 n n C6 C2 Q4B sing 281 n n C2 C1 Q4B sing 282 n n C1 C9 Q4B sing 283 n n C9 C10 Q4B sing 284 n n C10 C7 Q4B sing 285 n n C7 B5 Q4B sing 286 n n C7 C3 Q4B sing 287 n n C7 B3 Q4B sing 288 n n B5 B6 Q4B sing 289 n n B5 B7 Q4B sing 290 n n B5 B3 Q4B sing 291 n n B6 B9 Q4B sing 292 n n B6 B10 Q4B sing 293 n n B9 B10 Q4B sing 294 n n B9 C3 Q4B sing 295 n n B1 C3 Q4B sing 296 n n B1 B8 Q4B sing 297 n n B1 B2 Q4B sing 298 n n B10 B7 Q4B sing 299 n n C3 B2 Q4B sing 300 n n B7 B8 Q4B sing 301 n n B3 B8 Q4B sing 302 n n B3 B2 Q4B sing 303 n n B8 B2 Q4B sing 304 n n N4 H1 Q4B sing 305 n n N4 H2 Q4B sing 306 n n C6 H3 Q4B sing 307 n n C6 H4 Q4B sing 308 n n C2 H5 Q4B sing 309 n n C2 H6 Q4B sing 310 n n C1 H7 Q4B sing 311 n n C1 H8 Q4B sing 312 n n C9 H9 Q4B sing 313 n n C9 H10 Q4B sing 314 n n C10 H11 Q4B sing 315 n n C10 H12 Q4B sing 316 n n B7 B6 Q4B sing 317 n n B8 B10 Q4B sing 318 n n C7 B2 Q4B sing 319 n n B1 B10 Q4B sing 320 n n B1 B9 Q4B sing 321 n n B7 B3 Q4B sing 322 n n # _atom_sites.entry_id 6YZM _atom_sites.fract_transf_matrix[1][1] 0.024 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.005827 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.02439 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01445 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 301 301 ZN ZN . C 3 Q4B A 1 302 1 Q4B C61 . D 4 HOH A 1 401 46 HOH HOH . D 4 HOH A 2 402 129 HOH HOH . D 4 HOH A 3 403 66 HOH HOH . D 4 HOH A 4 404 84 HOH HOH . D 4 HOH A 5 405 152 HOH HOH . D 4 HOH A 6 406 20 HOH HOH . D 4 HOH A 7 407 108 HOH HOH . D 4 HOH A 8 408 105 HOH HOH . D 4 HOH A 9 409 114 HOH HOH . D 4 HOH A 10 410 158 HOH HOH . D 4 HOH A 11 411 136 HOH HOH . D 4 HOH A 12 412 165 HOH HOH . D 4 HOH A 13 413 153 HOH HOH . D 4 HOH A 14 414 100 HOH HOH . D 4 HOH A 15 415 28 HOH HOH . D 4 HOH A 16 416 51 HOH HOH . D 4 HOH A 17 417 142 HOH HOH . D 4 HOH A 18 418 32 HOH HOH . D 4 HOH A 19 419 24 HOH HOH . D 4 HOH A 20 420 35 HOH HOH . D 4 HOH A 21 421 45 HOH HOH . D 4 HOH A 22 422 44 HOH HOH . D 4 HOH A 23 423 89 HOH HOH . D 4 HOH A 24 424 133 HOH HOH . D 4 HOH A 25 425 126 HOH HOH . D 4 HOH A 26 426 53 HOH HOH . D 4 HOH A 27 427 26 HOH HOH . D 4 HOH A 28 428 47 HOH HOH . D 4 HOH A 29 429 10 HOH HOH . D 4 HOH A 30 430 143 HOH HOH . D 4 HOH A 31 431 91 HOH HOH . D 4 HOH A 32 432 23 HOH HOH . D 4 HOH A 33 433 99 HOH HOH . D 4 HOH A 34 434 88 HOH HOH . D 4 HOH A 35 435 4 HOH HOH . D 4 HOH A 36 436 22 HOH HOH . D 4 HOH A 37 437 168 HOH HOH . D 4 HOH A 38 438 124 HOH HOH . D 4 HOH A 39 439 107 HOH HOH . D 4 HOH A 40 440 131 HOH HOH . D 4 HOH A 41 441 164 HOH HOH . D 4 HOH A 42 442 17 HOH HOH . D 4 HOH A 43 443 76 HOH HOH . D 4 HOH A 44 444 68 HOH HOH . D 4 HOH A 45 445 1 HOH HOH . D 4 HOH A 46 446 14 HOH HOH . D 4 HOH A 47 447 166 HOH HOH . D 4 HOH A 48 448 37 HOH HOH . D 4 HOH A 49 449 167 HOH HOH . D 4 HOH A 50 450 60 HOH HOH . D 4 HOH A 51 451 97 HOH HOH . D 4 HOH A 52 452 13 HOH HOH . D 4 HOH A 53 453 5 HOH HOH . D 4 HOH A 54 454 57 HOH HOH . D 4 HOH A 55 455 40 HOH HOH . D 4 HOH A 56 456 36 HOH HOH . D 4 HOH A 57 457 117 HOH HOH . D 4 HOH A 58 458 113 HOH HOH . D 4 HOH A 59 459 144 HOH HOH . D 4 HOH A 60 460 148 HOH HOH . D 4 HOH A 61 461 92 HOH HOH . D 4 HOH A 62 462 87 HOH HOH . D 4 HOH A 63 463 103 HOH HOH . D 4 HOH A 64 464 115 HOH HOH . D 4 HOH A 65 465 8 HOH HOH . D 4 HOH A 66 466 9 HOH HOH . D 4 HOH A 67 467 85 HOH HOH . D 4 HOH A 68 468 49 HOH HOH . D 4 HOH A 69 469 170 HOH HOH . D 4 HOH A 70 470 106 HOH HOH . D 4 HOH A 71 471 156 HOH HOH . D 4 HOH A 72 472 125 HOH HOH . D 4 HOH A 73 473 147 HOH HOH . D 4 HOH A 74 474 34 HOH HOH . D 4 HOH A 75 475 25 HOH HOH . D 4 HOH A 76 476 48 HOH HOH . D 4 HOH A 77 477 41 HOH HOH . D 4 HOH A 78 478 78 HOH HOH . D 4 HOH A 79 479 160 HOH HOH . D 4 HOH A 80 480 11 HOH HOH . D 4 HOH A 81 481 2 HOH HOH . D 4 HOH A 82 482 93 HOH HOH . D 4 HOH A 83 483 50 HOH HOH . D 4 HOH A 84 484 59 HOH HOH . D 4 HOH A 85 485 109 HOH HOH . D 4 HOH A 86 486 21 HOH HOH . D 4 HOH A 87 487 42 HOH HOH . D 4 HOH A 88 488 70 HOH HOH . D 4 HOH A 89 489 55 HOH HOH . D 4 HOH A 90 490 16 HOH HOH . D 4 HOH A 91 491 19 HOH HOH . D 4 HOH A 92 492 80 HOH HOH . D 4 HOH A 93 493 6 HOH HOH . D 4 HOH A 94 494 29 HOH HOH . D 4 HOH A 95 495 101 HOH HOH . D 4 HOH A 96 496 104 HOH HOH . D 4 HOH A 97 497 30 HOH HOH . D 4 HOH A 98 498 162 HOH HOH . D 4 HOH A 99 499 163 HOH HOH . D 4 HOH A 100 500 56 HOH HOH . D 4 HOH A 101 501 33 HOH HOH . D 4 HOH A 102 502 140 HOH HOH . D 4 HOH A 103 503 12 HOH HOH . D 4 HOH A 104 504 67 HOH HOH . D 4 HOH A 105 505 134 HOH HOH . D 4 HOH A 106 506 63 HOH HOH . D 4 HOH A 107 507 96 HOH HOH . D 4 HOH A 108 508 82 HOH HOH . D 4 HOH A 109 509 77 HOH HOH . D 4 HOH A 110 510 145 HOH HOH . D 4 HOH A 111 511 62 HOH HOH . D 4 HOH A 112 512 94 HOH HOH . D 4 HOH A 113 513 112 HOH HOH . D 4 HOH A 114 514 75 HOH HOH . D 4 HOH A 115 515 54 HOH HOH . D 4 HOH A 116 516 74 HOH HOH . D 4 HOH A 117 517 39 HOH HOH . D 4 HOH A 118 518 43 HOH HOH . D 4 HOH A 119 519 102 HOH HOH . D 4 HOH A 120 520 3 HOH HOH . D 4 HOH A 121 521 138 HOH HOH . D 4 HOH A 122 522 18 HOH HOH . D 4 HOH A 123 523 119 HOH HOH . D 4 HOH A 124 524 110 HOH HOH . D 4 HOH A 125 525 38 HOH HOH . D 4 HOH A 126 526 95 HOH HOH . D 4 HOH A 127 527 116 HOH HOH . D 4 HOH A 128 528 69 HOH HOH . D 4 HOH A 129 529 141 HOH HOH . D 4 HOH A 130 530 65 HOH HOH . D 4 HOH A 131 531 27 HOH HOH . D 4 HOH A 132 532 86 HOH HOH . D 4 HOH A 133 533 146 HOH HOH . D 4 HOH A 134 534 83 HOH HOH . D 4 HOH A 135 535 7 HOH HOH . D 4 HOH A 136 536 151 HOH HOH . D 4 HOH A 137 537 58 HOH HOH . D 4 HOH A 138 538 157 HOH HOH . D 4 HOH A 139 539 118 HOH HOH . D 4 HOH A 140 540 31 HOH HOH . D 4 HOH A 141 541 15 HOH HOH . D 4 HOH A 142 542 90 HOH HOH . D 4 HOH A 143 543 73 HOH HOH . D 4 HOH A 144 544 123 HOH HOH . D 4 HOH A 145 545 171 HOH HOH . D 4 HOH A 146 546 98 HOH HOH . D 4 HOH A 147 547 64 HOH HOH . D 4 HOH A 148 548 71 HOH HOH . D 4 HOH A 149 549 122 HOH HOH . D 4 HOH A 150 550 161 HOH HOH . D 4 HOH A 151 551 52 HOH HOH . D 4 HOH A 152 552 169 HOH HOH . D 4 HOH A 153 553 172 HOH HOH . D 4 HOH A 154 554 139 HOH HOH . D 4 HOH A 155 555 159 HOH HOH . D 4 HOH A 156 556 128 HOH HOH . D 4 HOH A 157 557 149 HOH HOH . D 4 HOH A 158 558 79 HOH HOH . D 4 HOH A 159 559 137 HOH HOH . D 4 HOH A 160 560 130 HOH HOH . D 4 HOH A 161 561 150 HOH HOH . D 4 HOH A 162 562 135 HOH HOH . D 4 HOH A 163 563 61 HOH HOH . D 4 HOH A 164 564 132 HOH HOH . D 4 HOH A 165 565 121 HOH HOH . D 4 HOH A 166 566 154 HOH HOH . D 4 HOH A 167 567 127 HOH HOH . D 4 HOH A 168 568 111 HOH HOH . D 4 HOH A 169 569 72 HOH HOH . D 4 HOH A 170 570 155 HOH HOH . D 4 HOH A 171 571 120 HOH HOH . D 4 HOH A 172 572 81 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O11 Q4B . . . C 3 15.972 1.38 17.926 1 15.53 ? O11 Q4B 302 A 1 HETATM 2 S S8 Q4B . . . C 3 15.48 1.214 16.533 1 17.91 ? S8 Q4B 302 A 1 HETATM 3 O O5 Q4B . . . C 3 14.003 1.261 16.39 1 17.73 ? O5 Q4B 302 A 1 HETATM 4 N N4 Q4B . . . C 3 16.159 -0.091 15.876 1 16.61 ? N4 Q4B 302 A 1 HETATM 5 C C6 Q4B . . . C 3 16.071 2.612 15.559 1 20.11 ? C6 Q4B 302 A 1 HETATM 6 C C2 Q4B . . . C 3 15.434 3.889 16.095 1 21.83 ? C2 Q4B 302 A 1 HETATM 7 C C1 Q4B . . . C 3 15.906 5.174 15.442 1 24.16 ? C1 Q4B 302 A 1 HETATM 8 C C9 Q4B . . . C 3 15.674 5.206 13.943 1 25.86 ? C9 Q4B 302 A 1 HETATM 9 C C10 Q4B . . . C 3 15.657 6.596 13.273 1 28.73 ? C10 Q4B 302 A 1 HETATM 10 C C7 Q4B . . . C 3 16.977 7.347 13.201 1 30.16 ? C7 Q4B 302 A 1 HETATM 11 B B5 Q4B . . . C 3 18.375 6.824 14.021 1 31.83 ? B5 Q4B 302 A 1 HETATM 12 B B6 Q4B . . . C 3 19.15 8.342 14.509 1 31.22 ? B6 Q4B 302 A 1 HETATM 13 B B9 Q4B . . . C 3 18.159 9.702 13.896 1 30.98 ? B9 Q4B 302 A 1 HETATM 14 B B1 Q4B . . . C 3 18.144 9.656 12.101 1 31.08 ? B1 Q4B 302 A 1 HETATM 15 B B10 Q4B . . . C 3 19.623 9.202 13.016 1 31.28 ? B10 Q4B 302 A 1 HETATM 16 C C3 Q4B . . . C 3 16.875 9.022 13.018 1 30.95 ? C3 Q4B 302 A 1 HETATM 17 B B7 Q4B . . . C 3 19.728 7.425 13.06 1 30.48 ? B7 Q4B 302 A 1 HETATM 18 B B3 Q4B . . . C 3 18.266 6.778 12.243 1 30.68 ? B3 Q4B 302 A 1 HETATM 19 B B8 Q4B . . . C 3 19.074 8.209 11.605 1 30.44 ? B8 Q4B 302 A 1 HETATM 20 B B2 Q4B . . . C 3 17.301 8.158 11.634 1 31.53 ? B2 Q4B 302 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 290 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 20 #