data_6Z10
#
_model_server_result.job_id            YMpR3TfBHOMBqwuq5gAtvw 
_model_server_result.datetime_utc      '2024-11-21 13:56:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6z10 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":404}' 
#
_entry.id    6Z10 
#
_exptl.entry_id    6Z10 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    12 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.29 
_cell.angle_gamma         90 
_cell.entry_id            6Z10 
_cell.length_a            76.839 
_cell.length_b            151.003 
_cell.length_c            68.211 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6Z10 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
? 4 F N N 
? 4 G N N 
? 4 H N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
? 4 N N N 
? 4 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 14 A CYS 7 1_555 A SG CYS 270 A CYS 263 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? 
disulf ? disulf2 A SG CYS 98 A CYS 91 1_555 A SG CYS 175 A CYS 168 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf3 B SG CYS 30 B CYS 30 1_555 B SG CYS 103 B CYS 103 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.043 ? 
disulf ? disulf4 B SG CYS 58 B CYS 58 1_555 B SG CYS 113 B CYS 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.065 ? 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 237 n n 
C10 C9 OLC doub 238 n n 
C10 C11 OLC sing 239 n n 
C9 C8 OLC sing 240 n n 
C17 C16 OLC sing 241 z n 
C11 C12 OLC sing 242 n n 
C8 C7 OLC sing 243 n n 
C24 C22 OLC sing 244 n n 
C24 O25 OLC sing 245 n n 
C16 C15 OLC sing 246 n n 
C12 C13 OLC sing 247 n n 
C7 C6 OLC sing 248 n n 
C15 C14 OLC sing 249 n n 
C13 C14 OLC sing 250 n n 
C6 C5 OLC sing 251 n n 
C5 C4 OLC sing 252 n n 
C4 C3 OLC sing 253 n n 
C3 C2 OLC sing 254 n n 
C2 C1 OLC sing 255 n n 
C21 C22 OLC sing 256 n n 
C21 O20 OLC sing 257 n n 
C1 O19 OLC doub 258 n n 
C1 O20 OLC sing 259 n n 
C22 O23 OLC sing 260 n n 
C18 H18 OLC sing 261 n n 
C18 H18A OLC sing 262 n n 
C18 H18B OLC sing 263 n n 
C10 H10 OLC sing 264 n n 
C9 H9 OLC sing 265 n n 
C17 H17 OLC sing 266 n n 
C17 H17A OLC sing 267 n n 
C11 H11 OLC sing 268 n n 
C11 H11A OLC sing 269 n n 
C8 H8 OLC sing 270 n n 
C8 H8A OLC sing 271 n n 
C24 H24 OLC sing 272 n n 
C24 H24A OLC sing 273 n n 
C16 H16 OLC sing 274 n n 
C16 H16A OLC sing 275 n n 
C12 H12 OLC sing 276 n n 
C12 H12A OLC sing 277 n n 
C7 H7 OLC sing 278 n n 
C7 H7A OLC sing 279 n n 
C15 H15 OLC sing 280 n n 
C15 H15A OLC sing 281 n n 
C13 H13 OLC sing 282 n n 
C13 H13A OLC sing 283 n n 
C6 H6 OLC sing 284 n n 
C6 H6A OLC sing 285 n n 
C14 H14 OLC sing 286 n n 
C14 H14A OLC sing 287 n n 
C5 H5 OLC sing 288 n n 
C5 H5A OLC sing 289 n n 
C4 H4 OLC sing 290 n n 
C4 H4A OLC sing 291 n n 
C3 H3 OLC sing 292 n n 
C3 H3A OLC sing 293 n n 
C2 H2 OLC sing 294 n n 
C2 H2A OLC sing 295 n n 
C21 H21 OLC sing 296 n n 
C21 H21A OLC sing 297 n n 
C22 H22 OLC sing 298 n n 
O25 HO25 OLC sing 299 n n 
O23 HO23 OLC sing 300 n n 
#
_atom_sites.entry_id                     6Z10 
_atom_sites.fract_transf_matrix[1][1]    0.013014 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.005335 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006622 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.015844 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 Q4T A 1 401 401 Q4T LI1 . 
D 4 OLC A 1 402 501 OLC OLC . 
E 4 OLC A 1 403 502 OLC OLC . 
F 4 OLC A 1 404 504 OLC OLC . 
G 4 OLC A 1 405 505 OLC OLC . 
H 4 OLC A 1 406 506 OLC OLC . 
I 4 OLC A 1 407 507 OLC OLC . 
J 4 OLC A 1 408 508 OLC OLC . 
K 4 OLC A 1 409 509 OLC OLC . 
L 4 OLC A 1 410 510 OLC OLC . 
M 4 OLC A 1 411 511 OLC OLC . 
N 4 OLC A 1 412 512 OLC OLC . 
O 4 OLC A 1 413 513 OLC OLC . 
P 5 SO4 A 1 414 1 SO4 SO4 . 
Q 6 CL A 1 415 1 CL CL . 
R 7 HOH A 1 501 15 HOH HOH . 
R 7 HOH A 2 502 123 HOH HOH . 
R 7 HOH A 3 503 6 HOH HOH . 
R 7 HOH A 4 504 2 HOH HOH . 
R 7 HOH A 5 505 166 HOH HOH . 
R 7 HOH A 6 506 90 HOH HOH . 
R 7 HOH A 7 507 157 HOH HOH . 
R 7 HOH A 8 508 160 HOH HOH . 
R 7 HOH A 9 509 49 HOH HOH . 
R 7 HOH A 10 510 1 HOH HOH . 
R 7 HOH A 11 511 97 HOH HOH . 
R 7 HOH A 12 512 158 HOH HOH . 
R 7 HOH A 13 513 159 HOH HOH . 
R 7 HOH A 14 514 82 HOH HOH . 
R 7 HOH A 15 515 155 HOH HOH . 
R 7 HOH A 16 516 93 HOH HOH . 
R 7 HOH A 17 517 78 HOH HOH . 
R 7 HOH A 18 518 98 HOH HOH . 
R 7 HOH A 19 519 8 HOH HOH . 
R 7 HOH A 20 520 164 HOH HOH . 
R 7 HOH A 21 521 125 HOH HOH . 
R 7 HOH A 22 522 4 HOH HOH . 
R 7 HOH A 23 523 120 HOH HOH . 
R 7 HOH A 24 524 161 HOH HOH . 
R 7 HOH A 25 525 29 HOH HOH . 
R 7 HOH A 26 526 101 HOH HOH . 
R 7 HOH A 27 527 129 HOH HOH . 
R 7 HOH A 28 528 122 HOH HOH . 
R 7 HOH A 29 529 124 HOH HOH . 
R 7 HOH A 30 530 27 HOH HOH . 
R 7 HOH A 31 531 53 HOH HOH . 
R 7 HOH A 32 532 80 HOH HOH . 
R 7 HOH A 33 533 140 HOH HOH . 
R 7 HOH A 34 534 141 HOH HOH . 
R 7 HOH A 35 535 21 HOH HOH . 
R 7 HOH A 36 536 117 HOH HOH . 
R 7 HOH A 37 537 153 HOH HOH . 
R 7 HOH A 38 538 84 HOH HOH . 
R 7 HOH A 39 539 143 HOH HOH . 
R 7 HOH A 40 540 144 HOH HOH . 
R 7 HOH A 41 541 19 HOH HOH . 
R 7 HOH A 42 542 41 HOH HOH . 
R 7 HOH A 43 543 116 HOH HOH . 
R 7 HOH A 44 544 121 HOH HOH . 
R 7 HOH A 45 545 104 HOH HOH . 
R 7 HOH A 46 546 147 HOH HOH . 
R 7 HOH A 47 547 57 HOH HOH . 
R 7 HOH A 48 548 55 HOH HOH . 
R 7 HOH A 49 549 71 HOH HOH . 
R 7 HOH A 50 550 151 HOH HOH . 
R 7 HOH A 51 551 61 HOH HOH . 
R 7 HOH A 52 552 62 HOH HOH . 
R 7 HOH A 53 553 37 HOH HOH . 
R 7 HOH A 54 554 28 HOH HOH . 
R 7 HOH A 55 555 136 HOH HOH . 
R 7 HOH A 56 556 156 HOH HOH . 
R 7 HOH A 57 557 60 HOH HOH . 
R 7 HOH A 58 558 139 HOH HOH . 
R 7 HOH A 59 559 138 HOH HOH . 
R 7 HOH A 60 560 111 HOH HOH . 
R 7 HOH A 61 561 154 HOH HOH . 
R 7 HOH A 62 562 99 HOH HOH . 
R 7 HOH A 63 563 59 HOH HOH . 
R 7 HOH A 64 564 24 HOH HOH . 
R 7 HOH A 65 565 113 HOH HOH . 
R 7 HOH A 66 566 58 HOH HOH . 
R 7 HOH A 67 567 137 HOH HOH . 
R 7 HOH A 68 568 35 HOH HOH . 
R 7 HOH A 69 569 81 HOH HOH . 
R 7 HOH A 70 570 135 HOH HOH . 
R 7 HOH A 71 571 68 HOH HOH . 
R 7 HOH A 72 572 16 HOH HOH . 
R 7 HOH A 73 573 32 HOH HOH . 
R 7 HOH A 74 574 40 HOH HOH . 
R 7 HOH A 75 575 92 HOH HOH . 
R 7 HOH A 76 576 150 HOH HOH . 
R 7 HOH A 77 577 25 HOH HOH . 
R 7 HOH A 78 578 88 HOH HOH . 
R 7 HOH A 79 579 30 HOH HOH . 
R 7 HOH A 80 580 75 HOH HOH . 
R 7 HOH A 81 581 103 HOH HOH . 
R 7 HOH A 82 582 39 HOH HOH . 
R 7 HOH A 83 583 33 HOH HOH . 
R 7 HOH A 84 584 54 HOH HOH . 
R 7 HOH A 85 585 107 HOH HOH . 
R 7 HOH A 86 586 85 HOH HOH . 
R 7 HOH A 87 587 165 HOH HOH . 
R 7 HOH A 88 588 5 HOH HOH . 
R 7 HOH A 89 589 119 HOH HOH . 
R 7 HOH A 90 590 44 HOH HOH . 
R 7 HOH A 91 591 7 HOH HOH . 
R 7 HOH A 92 592 31 HOH HOH . 
R 7 HOH A 93 593 47 HOH HOH . 
R 7 HOH A 94 594 83 HOH HOH . 
R 7 HOH A 95 595 89 HOH HOH . 
R 7 HOH A 96 596 14 HOH HOH . 
R 7 HOH A 97 597 148 HOH HOH . 
R 7 HOH A 98 598 65 HOH HOH . 
R 7 HOH A 99 599 115 HOH HOH . 
R 7 HOH A 100 600 38 HOH HOH . 
R 7 HOH A 101 601 36 HOH HOH . 
R 7 HOH A 102 602 13 HOH HOH . 
R 7 HOH A 103 603 152 HOH HOH . 
R 7 HOH A 104 604 9 HOH HOH . 
R 7 HOH A 105 605 132 HOH HOH . 
R 7 HOH A 106 606 94 HOH HOH . 
R 7 HOH A 107 607 127 HOH HOH . 
R 7 HOH A 108 609 63 HOH HOH . 
S 7 HOH B 1 201 145 HOH HOH . 
S 7 HOH B 2 202 162 HOH HOH . 
S 7 HOH B 3 203 17 HOH HOH . 
S 7 HOH B 4 204 146 HOH HOH . 
S 7 HOH B 5 205 76 HOH HOH . 
S 7 HOH B 6 206 142 HOH HOH . 
S 7 HOH B 7 207 114 HOH HOH . 
S 7 HOH B 8 208 102 HOH HOH . 
S 7 HOH B 9 209 42 HOH HOH . 
S 7 HOH B 10 210 163 HOH HOH . 
S 7 HOH B 11 211 77 HOH HOH . 
S 7 HOH B 12 212 70 HOH HOH . 
S 7 HOH B 13 213 46 HOH HOH . 
S 7 HOH B 14 214 3 HOH HOH . 
S 7 HOH B 15 215 51 HOH HOH . 
S 7 HOH B 16 216 109 HOH HOH . 
S 7 HOH B 17 217 20 HOH HOH . 
S 7 HOH B 18 218 105 HOH HOH . 
S 7 HOH B 19 219 50 HOH HOH . 
S 7 HOH B 20 220 64 HOH HOH . 
S 7 HOH B 21 221 118 HOH HOH . 
S 7 HOH B 22 222 87 HOH HOH . 
S 7 HOH B 23 223 133 HOH HOH . 
S 7 HOH B 24 224 26 HOH HOH . 
S 7 HOH B 25 225 10 HOH HOH . 
S 7 HOH B 26 226 110 HOH HOH . 
S 7 HOH B 27 227 72 HOH HOH . 
S 7 HOH B 28 228 96 HOH HOH . 
S 7 HOH B 29 229 45 HOH HOH . 
S 7 HOH B 30 230 131 HOH HOH . 
S 7 HOH B 31 231 108 HOH HOH . 
S 7 HOH B 32 232 149 HOH HOH . 
S 7 HOH B 33 233 43 HOH HOH . 
S 7 HOH B 34 234 11 HOH HOH . 
S 7 HOH B 35 235 128 HOH HOH . 
S 7 HOH B 36 236 100 HOH HOH . 
S 7 HOH B 37 237 86 HOH HOH . 
S 7 HOH B 38 238 12 HOH HOH . 
S 7 HOH B 39 239 79 HOH HOH . 
S 7 HOH B 40 240 130 HOH HOH . 
S 7 HOH B 41 241 18 HOH HOH . 
S 7 HOH B 42 242 126 HOH HOH . 
S 7 HOH B 43 243 73 HOH HOH . 
S 7 HOH B 44 244 67 HOH HOH . 
S 7 HOH B 45 245 134 HOH HOH . 
S 7 HOH B 46 246 95 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C8 OLC . . . F 4 -20.88 10.675 28.973 1 71.48 ? C8 OLC 404 A 1 
HETATM 2 C C24 OLC . . . F 4 -16.037 5.014 26.852 1 79.64 ? C24 OLC 404 A 1 
HETATM 3 C C7 OLC . . . F 4 -19.468 10.064 28.79 1 71.88 ? C7 OLC 404 A 1 
HETATM 4 C C6 OLC . . . F 4 -18.649 10.81 27.694 1 72.39 ? C6 OLC 404 A 1 
HETATM 5 C C5 OLC . . . F 4 -17.753 9.842 26.867 1 72.74 ? C5 OLC 404 A 1 
HETATM 6 C C4 OLC . . . F 4 -16.347 10.454 26.664 1 73.16 ? C4 OLC 404 A 1 
HETATM 7 C C3 OLC . . . F 4 -15.241 9.375 26.617 1 74.02 ? C3 OLC 404 A 1 
HETATM 8 C C2 OLC . . . F 4 -15.231 8.626 25.263 1 75.33 ? C2 OLC 404 A 1 
HETATM 9 C C21 OLC . . . F 4 -14.984 5.953 24.675 1 78.66 ? C21 OLC 404 A 1 
HETATM 10 C C1 OLC . . . F 4 -13.858 8.082 24.935 1 76.77 ? C1 OLC 404 A 1 
HETATM 11 C C22 OLC . . . F 4 -14.85 4.936 25.848 1 79.43 ? C22 OLC 404 A 1 
HETATM 12 O O19 OLC . . . F 4 -12.881 8.823 24.999 1 76.55 ? O19 OLC 404 A 1 
HETATM 13 O O25 OLC . . . F 4 -15.747 4.2 28.004 1 79.68 ? O25 OLC 404 A 1 
HETATM 14 O O23 OLC . . . F 4 -14.725 3.592 25.34 1 79.88 ? O23 OLC 404 A 1 
HETATM 15 O O20 OLC . . . F 4 -13.787 6.765 24.577 1 78.03 ? O20 OLC 404 A 1 
#
_model_server_stats.io_time_ms              15 
_model_server_stats.parse_time_ms           107 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           273 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           15 
#