data_6Z1V # _model_server_result.job_id BZV5XHYplfNRDOmWp1HtEQ _model_server_result.datetime_utc '2024-10-11 21:52:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z1v # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":301}' # _entry.id 6Z1V # _exptl.entry_id 6Z1V _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z1V _cell.length_a 61.521 _cell.length_b 89.446 _cell.length_c 35.684 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z1V _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall 'P 2 2ab' _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 41 A CYS 152 1_555 A SG CYS 70 A CYS 181 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.09 ? disulf ? disulf2 A SG CYS 42 A CYS 153 1_555 A SG CYS 56 A CYS 167 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.033 ? disulf ? disulf3 A SG CYS 42 A CYS 153 1_555 A SG CYS 56 A CYS 167 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.012 ? disulf ? disulf4 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? A ? ? A ? ? ? ? ? ? ? 2.043 ? disulf ? disulf5 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? B ? ? B ? ? ? ? ? ? ? 2.022 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 253 n n C1 C2 PGE sing 254 n n C1 H1 PGE sing 255 n n C1 H12 PGE sing 256 n n O1 HO1 PGE sing 257 n n C2 O2 PGE sing 258 n n C2 H2 PGE sing 259 n n C2 H22 PGE sing 260 n n O2 C3 PGE sing 261 n n C3 C4 PGE sing 262 n n C3 H3 PGE sing 263 n n C3 H32 PGE sing 264 n n C4 O3 PGE sing 265 n n C4 H4 PGE sing 266 n n C4 H42 PGE sing 267 n n O4 C6 PGE sing 268 n n O4 HO4 PGE sing 269 n n C6 C5 PGE sing 270 n n C6 H6 PGE sing 271 n n C6 H62 PGE sing 272 n n C5 O3 PGE sing 273 n n C5 H5 PGE sing 274 n n C5 H52 PGE sing 275 n n # _atom_sites.entry_id 6Z1V _atom_sites.fract_transf_matrix[1][1] 0.016255 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01118 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.028024 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PGE A 1 301 2 PGE PGE . D 4 EDO B 1 201 1 EDO EDO . E 5 ACY B 1 202 1 ACY ACY . F 6 HOH A 1 401 102 HOH HOH . F 6 HOH A 2 402 145 HOH HOH . F 6 HOH A 3 403 57 HOH HOH . F 6 HOH A 4 404 76 HOH HOH . F 6 HOH A 5 405 139 HOH HOH . F 6 HOH A 6 406 77 HOH HOH . F 6 HOH A 7 407 104 HOH HOH . F 6 HOH A 8 408 152 HOH HOH . F 6 HOH A 9 409 131 HOH HOH . F 6 HOH A 10 410 16 HOH HOH . F 6 HOH A 11 411 34 HOH HOH . F 6 HOH A 12 412 20 HOH HOH . F 6 HOH A 13 413 24 HOH HOH . F 6 HOH A 14 414 10 HOH HOH . F 6 HOH A 15 415 40 HOH HOH . F 6 HOH A 16 416 155 HOH HOH . F 6 HOH A 17 417 126 HOH HOH . F 6 HOH A 18 418 67 HOH HOH . F 6 HOH A 19 419 156 HOH HOH . F 6 HOH A 20 420 52 HOH HOH . F 6 HOH A 21 421 112 HOH HOH . F 6 HOH A 22 422 46 HOH HOH . F 6 HOH A 23 423 79 HOH HOH . F 6 HOH A 24 424 89 HOH HOH . F 6 HOH A 25 425 135 HOH HOH . F 6 HOH A 26 426 63 HOH HOH . F 6 HOH A 27 427 17 HOH HOH . F 6 HOH A 28 428 23 HOH HOH . F 6 HOH A 29 429 27 HOH HOH . F 6 HOH A 30 430 92 HOH HOH . F 6 HOH A 31 431 50 HOH HOH . F 6 HOH A 32 432 75 HOH HOH . F 6 HOH A 33 433 15 HOH HOH . F 6 HOH A 34 434 151 HOH HOH . F 6 HOH A 35 435 120 HOH HOH . F 6 HOH A 36 436 42 HOH HOH . F 6 HOH A 37 437 124 HOH HOH . F 6 HOH A 38 438 123 HOH HOH . F 6 HOH A 39 439 153 HOH HOH . F 6 HOH A 40 440 146 HOH HOH . F 6 HOH A 41 441 148 HOH HOH . G 6 HOH B 1 301 28 HOH HOH . G 6 HOH B 2 302 130 HOH HOH . G 6 HOH B 3 303 51 HOH HOH . G 6 HOH B 4 304 81 HOH HOH . G 6 HOH B 5 305 66 HOH HOH . G 6 HOH B 6 306 83 HOH HOH . G 6 HOH B 7 307 56 HOH HOH . G 6 HOH B 8 308 161 HOH HOH . G 6 HOH B 9 309 29 HOH HOH . G 6 HOH B 10 310 12 HOH HOH . G 6 HOH B 11 311 78 HOH HOH . G 6 HOH B 12 312 48 HOH HOH . G 6 HOH B 13 313 61 HOH HOH . G 6 HOH B 14 314 22 HOH HOH . G 6 HOH B 15 315 55 HOH HOH . G 6 HOH B 16 316 41 HOH HOH . G 6 HOH B 17 317 35 HOH HOH . G 6 HOH B 18 318 30 HOH HOH . G 6 HOH B 19 319 86 HOH HOH . G 6 HOH B 20 320 8 HOH HOH . G 6 HOH B 21 321 45 HOH HOH . G 6 HOH B 22 322 118 HOH HOH . G 6 HOH B 23 323 59 HOH HOH . G 6 HOH B 24 324 1 HOH HOH . G 6 HOH B 25 325 11 HOH HOH . G 6 HOH B 26 326 62 HOH HOH . G 6 HOH B 27 327 4 HOH HOH . G 6 HOH B 28 328 36 HOH HOH . G 6 HOH B 29 329 88 HOH HOH . G 6 HOH B 30 330 149 HOH HOH . G 6 HOH B 31 331 33 HOH HOH . G 6 HOH B 32 332 26 HOH HOH . G 6 HOH B 33 333 21 HOH HOH . G 6 HOH B 34 334 70 HOH HOH . G 6 HOH B 35 335 7 HOH HOH . G 6 HOH B 36 336 128 HOH HOH . G 6 HOH B 37 337 107 HOH HOH . G 6 HOH B 38 338 3 HOH HOH . G 6 HOH B 39 339 47 HOH HOH . G 6 HOH B 40 340 43 HOH HOH . G 6 HOH B 41 341 13 HOH HOH . G 6 HOH B 42 342 138 HOH HOH . G 6 HOH B 43 343 54 HOH HOH . G 6 HOH B 44 344 39 HOH HOH . G 6 HOH B 45 345 99 HOH HOH . G 6 HOH B 46 346 37 HOH HOH . G 6 HOH B 47 347 101 HOH HOH . G 6 HOH B 48 348 9 HOH HOH . G 6 HOH B 49 349 53 HOH HOH . G 6 HOH B 50 350 115 HOH HOH . G 6 HOH B 51 351 6 HOH HOH . G 6 HOH B 52 352 64 HOH HOH . G 6 HOH B 53 353 18 HOH HOH . G 6 HOH B 54 354 72 HOH HOH . G 6 HOH B 55 355 65 HOH HOH . G 6 HOH B 56 356 87 HOH HOH . G 6 HOH B 57 357 129 HOH HOH . G 6 HOH B 58 358 49 HOH HOH . G 6 HOH B 59 359 32 HOH HOH . G 6 HOH B 60 360 25 HOH HOH . G 6 HOH B 61 361 98 HOH HOH . G 6 HOH B 62 362 127 HOH HOH . G 6 HOH B 63 363 19 HOH HOH . G 6 HOH B 64 364 97 HOH HOH . G 6 HOH B 65 365 91 HOH HOH . G 6 HOH B 66 366 14 HOH HOH . G 6 HOH B 67 367 5 HOH HOH . G 6 HOH B 68 368 93 HOH HOH . G 6 HOH B 69 369 157 HOH HOH . G 6 HOH B 70 370 162 HOH HOH . G 6 HOH B 71 371 109 HOH HOH . G 6 HOH B 72 372 85 HOH HOH . G 6 HOH B 73 373 44 HOH HOH . G 6 HOH B 74 374 60 HOH HOH . G 6 HOH B 75 375 31 HOH HOH . G 6 HOH B 76 376 136 HOH HOH . G 6 HOH B 77 377 150 HOH HOH . G 6 HOH B 78 378 140 HOH HOH . G 6 HOH B 79 379 160 HOH HOH . G 6 HOH B 80 380 2 HOH HOH . G 6 HOH B 81 381 90 HOH HOH . G 6 HOH B 82 382 84 HOH HOH . G 6 HOH B 83 383 154 HOH HOH . G 6 HOH B 84 384 95 HOH HOH . G 6 HOH B 85 385 73 HOH HOH . G 6 HOH B 86 386 94 HOH HOH . G 6 HOH B 87 387 58 HOH HOH . G 6 HOH B 88 388 38 HOH HOH . G 6 HOH B 89 389 164 HOH HOH . G 6 HOH B 90 390 163 HOH HOH . G 6 HOH B 91 391 147 HOH HOH . G 6 HOH B 92 392 143 HOH HOH . G 6 HOH B 93 393 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . C 3 4.323 5.553 26.105 1 75.58 ? C1 PGE 301 A 1 HETATM 2 O O1 PGE . . . C 3 3.969 4.612 25.09 1 46.76 ? O1 PGE 301 A 1 HETATM 3 C C2 PGE . . . C 3 5.527 6.384 25.685 1 57.21 ? C2 PGE 301 A 1 HETATM 4 O O2 PGE . . . C 3 6.622 5.55 25.345 1 103.69 ? O2 PGE 301 A 1 HETATM 5 C C3 PGE . . . C 3 7.886 6.184 25.458 1 64.78 ? C3 PGE 301 A 1 HETATM 6 C C4 PGE . . . C 3 8.925 5.372 24.699 1 58.64 ? C4 PGE 301 A 1 HETATM 7 O O4 PGE . . . C 3 11.624 4.742 21.377 1 51.53 ? O4 PGE 301 A 1 HETATM 8 C C6 PGE . . . C 3 11.491 5.178 22.726 1 65.45 ? C6 PGE 301 A 1 HETATM 9 C C5 PGE . . . C 3 10.277 6.08 22.84 1 40.48 ? C5 PGE 301 A 1 HETATM 10 O O3 PGE . . . C 3 9.931 6.241 24.206 1 85.85 ? O3 PGE 301 A 1 HETATM 11 H H1 PGE . . . C 3 4.581 5.048 27.047 1 90.73 ? H1 PGE 301 A 1 HETATM 12 H H12 PGE . . . C 3 3.496 6.249 26.311 1 90.73 ? H12 PGE 301 A 1 HETATM 13 H HO1 PGE . . . C 3 3.191 4.127 25.393 0 56.15 ? HO1 PGE 301 A 1 HETATM 14 H H2 PGE . . . C 3 5.8 7.058 26.516 1 68.69 ? H2 PGE 301 A 1 HETATM 15 H H22 PGE . . . C 3 5.241 7.014 24.825 1 68.69 ? H22 PGE 301 A 1 HETATM 16 H H3 PGE . . . C 3 8.194 6.263 26.514 1 77.77 ? H3 PGE 301 A 1 HETATM 17 H H32 PGE . . . C 3 7.853 7.204 25.04 1 77.77 ? H32 PGE 301 A 1 HETATM 18 H H4 PGE . . . C 3 8.431 4.836 23.871 1 70.4 ? H4 PGE 301 A 1 HETATM 19 H H42 PGE . . . C 3 9.359 4.617 25.377 1 70.4 ? H42 PGE 301 A 1 HETATM 20 H HO4 PGE . . . C 3 11.705 5.525 20.818 1 61.87 ? HO4 PGE 301 A 1 HETATM 21 H H6 PGE . . . C 3 12.376 5.746 23.057 1 78.57 ? H6 PGE 301 A 1 HETATM 22 H H62 PGE . . . C 3 11.357 4.328 23.415 1 78.57 ? H62 PGE 301 A 1 HETATM 23 H H5 PGE . . . C 3 9.444 5.629 22.273 1 48.61 ? H5 PGE 301 A 1 HETATM 24 H H52 PGE . . . C 3 10.51 7.052 22.374 1 48.61 ? H52 PGE 301 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 306 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 24 #