data_6Z23 # _model_server_result.job_id h1Ab8MljxVHC53rwYo4-3A _model_server_result.datetime_utc '2024-11-05 19:46:49' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z23 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":302}' # _entry.id 6Z23 # _exptl.entry_id 6Z23 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z23 _cell.length_a 60.137 _cell.length_b 78.912 _cell.length_c 55.655 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z23 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 65 A CYS 69 1_555 A SG CYS 234 A CYS 238 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.005 ? covale ? covale1 A OG SER 66 A SER 70 1_555 I C8 CEF . A CEF 308 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.278 ? covale ? covale2 A OG SER 66 A SER 70 1_555 I C8 CEF . A CEF 308 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.292 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 171 n n C1 C2 GOL sing 172 n n C1 H11 GOL sing 173 n n C1 H12 GOL sing 174 n n O1 HO1 GOL sing 175 n n C2 O2 GOL sing 176 n n C2 C3 GOL sing 177 n n C2 H2 GOL sing 178 n n O2 HO2 GOL sing 179 n n C3 O3 GOL sing 180 n n C3 H31 GOL sing 181 n n C3 H32 GOL sing 182 n n O3 HO3 GOL sing 183 n n # _atom_sites.entry_id 6Z23 _atom_sites.fract_transf_matrix[1][1] 0.016629 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012672 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017968 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL A 1 301 2 GOL GOL . C 2 GOL A 1 302 3 GOL GOL . D 3 SO4 A 1 303 1 SO4 SO4 . E 3 SO4 A 1 304 2 SO4 SO4 . F 3 SO4 A 1 305 3 SO4 SO4 . G 3 SO4 A 1 306 4 SO4 SO4 . H 3 SO4 A 1 307 5 SO4 SO4 . I 4 CEF A 1 308 1 CEF TAX . J 5 HOH A 1 401 200 HOH HOH . J 5 HOH A 2 402 135 HOH HOH . J 5 HOH A 3 403 138 HOH HOH . J 5 HOH A 4 404 145 HOH HOH . J 5 HOH A 5 405 172 HOH HOH . J 5 HOH A 6 406 165 HOH HOH . J 5 HOH A 7 407 205 HOH HOH . J 5 HOH A 8 408 107 HOH HOH . J 5 HOH A 9 409 140 HOH HOH . J 5 HOH A 10 410 186 HOH HOH . J 5 HOH A 11 411 136 HOH HOH . J 5 HOH A 12 412 180 HOH HOH . J 5 HOH A 13 413 85 HOH HOH . J 5 HOH A 14 414 79 HOH HOH . J 5 HOH A 15 415 151 HOH HOH . J 5 HOH A 16 416 87 HOH HOH . J 5 HOH A 17 417 117 HOH HOH . J 5 HOH A 18 418 71 HOH HOH . J 5 HOH A 19 419 100 HOH HOH . J 5 HOH A 20 420 4 HOH HOH . J 5 HOH A 21 421 182 HOH HOH . J 5 HOH A 22 422 123 HOH HOH . J 5 HOH A 23 423 48 HOH HOH . J 5 HOH A 24 424 119 HOH HOH . J 5 HOH A 25 425 19 HOH HOH . J 5 HOH A 26 426 15 HOH HOH . J 5 HOH A 27 427 59 HOH HOH . J 5 HOH A 28 428 69 HOH HOH . J 5 HOH A 29 429 101 HOH HOH . J 5 HOH A 30 430 38 HOH HOH . J 5 HOH A 31 431 55 HOH HOH . J 5 HOH A 32 432 52 HOH HOH . J 5 HOH A 33 433 2 HOH HOH . J 5 HOH A 34 434 177 HOH HOH . J 5 HOH A 35 435 120 HOH HOH . J 5 HOH A 36 436 34 HOH HOH . J 5 HOH A 37 437 20 HOH HOH . J 5 HOH A 38 438 49 HOH HOH . J 5 HOH A 39 439 167 HOH HOH . J 5 HOH A 40 440 10 HOH HOH . J 5 HOH A 41 441 82 HOH HOH . J 5 HOH A 42 442 33 HOH HOH . J 5 HOH A 43 443 11 HOH HOH . J 5 HOH A 44 444 39 HOH HOH . J 5 HOH A 45 445 217 HOH HOH . J 5 HOH A 46 446 1 HOH HOH . J 5 HOH A 47 447 28 HOH HOH . J 5 HOH A 48 448 62 HOH HOH . J 5 HOH A 49 449 103 HOH HOH . J 5 HOH A 50 450 35 HOH HOH . J 5 HOH A 51 451 26 HOH HOH . J 5 HOH A 52 452 75 HOH HOH . J 5 HOH A 53 453 76 HOH HOH . J 5 HOH A 54 454 209 HOH HOH . J 5 HOH A 55 455 56 HOH HOH . J 5 HOH A 56 456 47 HOH HOH . J 5 HOH A 57 457 158 HOH HOH . J 5 HOH A 58 458 143 HOH HOH . J 5 HOH A 59 459 99 HOH HOH . J 5 HOH A 60 460 9 HOH HOH . J 5 HOH A 61 461 196 HOH HOH . J 5 HOH A 62 462 201 HOH HOH . J 5 HOH A 63 463 216 HOH HOH . J 5 HOH A 64 464 57 HOH HOH . J 5 HOH A 65 465 5 HOH HOH . J 5 HOH A 66 466 83 HOH HOH . J 5 HOH A 67 467 6 HOH HOH . J 5 HOH A 68 468 7 HOH HOH . J 5 HOH A 69 469 104 HOH HOH . J 5 HOH A 70 470 219 HOH HOH . J 5 HOH A 71 471 213 HOH HOH . J 5 HOH A 72 472 24 HOH HOH . J 5 HOH A 73 473 18 HOH HOH . J 5 HOH A 74 474 94 HOH HOH . J 5 HOH A 75 475 36 HOH HOH . J 5 HOH A 76 476 64 HOH HOH . J 5 HOH A 77 477 95 HOH HOH . J 5 HOH A 78 478 13 HOH HOH . J 5 HOH A 79 479 14 HOH HOH . J 5 HOH A 80 480 17 HOH HOH . J 5 HOH A 81 481 27 HOH HOH . J 5 HOH A 82 482 218 HOH HOH . J 5 HOH A 83 483 114 HOH HOH . J 5 HOH A 84 484 58 HOH HOH . J 5 HOH A 85 485 98 HOH HOH . J 5 HOH A 86 486 43 HOH HOH . J 5 HOH A 87 487 154 HOH HOH . J 5 HOH A 88 488 168 HOH HOH . J 5 HOH A 89 489 60 HOH HOH . J 5 HOH A 90 490 66 HOH HOH . J 5 HOH A 91 491 45 HOH HOH . J 5 HOH A 92 492 131 HOH HOH . J 5 HOH A 93 493 53 HOH HOH . J 5 HOH A 94 494 40 HOH HOH . J 5 HOH A 95 495 8 HOH HOH . J 5 HOH A 96 496 30 HOH HOH . J 5 HOH A 97 497 122 HOH HOH . J 5 HOH A 98 498 211 HOH HOH . J 5 HOH A 99 499 92 HOH HOH . J 5 HOH A 100 500 108 HOH HOH . J 5 HOH A 101 501 137 HOH HOH . J 5 HOH A 102 502 74 HOH HOH . J 5 HOH A 103 503 222 HOH HOH . J 5 HOH A 104 504 46 HOH HOH . J 5 HOH A 105 505 93 HOH HOH . J 5 HOH A 106 506 129 HOH HOH . J 5 HOH A 107 507 54 HOH HOH . J 5 HOH A 108 508 12 HOH HOH . J 5 HOH A 109 509 146 HOH HOH . J 5 HOH A 110 510 84 HOH HOH . J 5 HOH A 111 511 121 HOH HOH . J 5 HOH A 112 512 183 HOH HOH . J 5 HOH A 113 513 125 HOH HOH . J 5 HOH A 114 514 164 HOH HOH . J 5 HOH A 115 515 78 HOH HOH . J 5 HOH A 116 516 29 HOH HOH . J 5 HOH A 117 517 110 HOH HOH . J 5 HOH A 118 518 77 HOH HOH . J 5 HOH A 119 519 111 HOH HOH . J 5 HOH A 120 520 81 HOH HOH . J 5 HOH A 121 521 44 HOH HOH . J 5 HOH A 122 522 3 HOH HOH . J 5 HOH A 123 523 22 HOH HOH . J 5 HOH A 124 524 170 HOH HOH . J 5 HOH A 125 525 105 HOH HOH . J 5 HOH A 126 526 184 HOH HOH . J 5 HOH A 127 527 32 HOH HOH . J 5 HOH A 128 528 65 HOH HOH . J 5 HOH A 129 529 221 HOH HOH . J 5 HOH A 130 530 109 HOH HOH . J 5 HOH A 131 531 88 HOH HOH . J 5 HOH A 132 532 173 HOH HOH . J 5 HOH A 133 533 70 HOH HOH . J 5 HOH A 134 534 68 HOH HOH . J 5 HOH A 135 535 23 HOH HOH . J 5 HOH A 136 536 149 HOH HOH . J 5 HOH A 137 537 116 HOH HOH . J 5 HOH A 138 538 128 HOH HOH . J 5 HOH A 139 539 37 HOH HOH . J 5 HOH A 140 540 126 HOH HOH . J 5 HOH A 141 541 148 HOH HOH . J 5 HOH A 142 542 67 HOH HOH . J 5 HOH A 143 543 97 HOH HOH . J 5 HOH A 144 544 73 HOH HOH . J 5 HOH A 145 545 113 HOH HOH . J 5 HOH A 146 546 41 HOH HOH . J 5 HOH A 147 547 21 HOH HOH . J 5 HOH A 148 548 162 HOH HOH . J 5 HOH A 149 549 90 HOH HOH . J 5 HOH A 150 550 155 HOH HOH . J 5 HOH A 151 551 212 HOH HOH . J 5 HOH A 152 552 25 HOH HOH . J 5 HOH A 153 553 42 HOH HOH . J 5 HOH A 154 554 80 HOH HOH . J 5 HOH A 155 555 31 HOH HOH . J 5 HOH A 156 556 178 HOH HOH . J 5 HOH A 157 557 102 HOH HOH . J 5 HOH A 158 558 50 HOH HOH . J 5 HOH A 159 559 112 HOH HOH . J 5 HOH A 160 560 63 HOH HOH . J 5 HOH A 161 561 127 HOH HOH . J 5 HOH A 162 562 134 HOH HOH . J 5 HOH A 163 563 106 HOH HOH . J 5 HOH A 164 564 96 HOH HOH . J 5 HOH A 165 565 214 HOH HOH . J 5 HOH A 166 566 89 HOH HOH . J 5 HOH A 167 567 160 HOH HOH . J 5 HOH A 168 568 220 HOH HOH . J 5 HOH A 169 569 185 HOH HOH . J 5 HOH A 170 570 144 HOH HOH . J 5 HOH A 171 571 188 HOH HOH . J 5 HOH A 172 572 133 HOH HOH . J 5 HOH A 173 573 198 HOH HOH . J 5 HOH A 174 574 195 HOH HOH . J 5 HOH A 175 575 187 HOH HOH . J 5 HOH A 176 576 174 HOH HOH . J 5 HOH A 177 577 142 HOH HOH . J 5 HOH A 178 578 159 HOH HOH . J 5 HOH A 179 579 203 HOH HOH . J 5 HOH A 180 580 199 HOH HOH . J 5 HOH A 181 581 86 HOH HOH . J 5 HOH A 182 582 152 HOH HOH . J 5 HOH A 183 583 124 HOH HOH . J 5 HOH A 184 584 192 HOH HOH . J 5 HOH A 185 585 223 HOH HOH . J 5 HOH A 186 586 206 HOH HOH . J 5 HOH A 187 587 91 HOH HOH . J 5 HOH A 188 588 130 HOH HOH . J 5 HOH A 189 589 202 HOH HOH . J 5 HOH A 190 590 115 HOH HOH . J 5 HOH A 191 591 157 HOH HOH . J 5 HOH A 192 592 72 HOH HOH . J 5 HOH A 193 593 51 HOH HOH . J 5 HOH A 194 594 215 HOH HOH . J 5 HOH A 195 595 150 HOH HOH . J 5 HOH A 196 596 175 HOH HOH . J 5 HOH A 197 597 163 HOH HOH . J 5 HOH A 198 598 208 HOH HOH . J 5 HOH A 199 599 132 HOH HOH . J 5 HOH A 200 600 139 HOH HOH . J 5 HOH A 201 601 16 HOH HOH . J 5 HOH A 202 602 207 HOH HOH . J 5 HOH A 203 603 161 HOH HOH . J 5 HOH A 204 604 189 HOH HOH . J 5 HOH A 205 605 61 HOH HOH . J 5 HOH A 206 606 156 HOH HOH . J 5 HOH A 207 607 141 HOH HOH . J 5 HOH A 208 608 204 HOH HOH . J 5 HOH A 209 609 193 HOH HOH . J 5 HOH A 210 610 166 HOH HOH . J 5 HOH A 211 611 153 HOH HOH . J 5 HOH A 212 612 147 HOH HOH . J 5 HOH A 213 613 118 HOH HOH . J 5 HOH A 214 614 210 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . C 2 10.737 15.614 -7.352 1 44.96 ? C1 GOL 302 A 1 HETATM 2 O O1 GOL . . . C 2 11.349 16.391 -6.362 1 43.98 ? O1 GOL 302 A 1 HETATM 3 C C2 GOL . . . C 2 10.037 14.381 -6.733 1 44.19 ? C2 GOL 302 A 1 HETATM 4 O O2 GOL . . . C 2 8.901 14.712 -5.947 1 41.95 ? O2 GOL 302 A 1 HETATM 5 C C3 GOL . . . C 2 9.616 13.486 -7.94 1 46.78 ? C3 GOL 302 A 1 HETATM 6 O O3 GOL . . . C 2 8.841 12.424 -7.441 1 50.07 ? O3 GOL 302 A 1 HETATM 7 H H11 GOL . . . C 2 11.377 15.299 -8.009 1 53.99 ? H11 GOL 302 A 1 HETATM 8 H H12 GOL . . . C 2 10.074 16.12 -7.848 1 53.99 ? H12 GOL 302 A 1 HETATM 9 H HO1 GOL . . . C 2 12.179 16.355 -6.491 1 52.81 ? HO1 GOL 302 A 1 HETATM 10 H H2 GOL . . . C 2 10.664 13.935 -6.143 1 53.07 ? H2 GOL 302 A 1 HETATM 11 H HO2 GOL . . . C 2 9.066 15.446 -5.559 1 50.38 ? HO2 GOL 302 A 1 HETATM 12 H H31 GOL . . . C 2 10.417 13.19 -8.4 1 56.18 ? H31 GOL 302 A 1 HETATM 13 H H32 GOL . . . C 2 9.141 14.037 -8.582 1 56.18 ? H32 GOL 302 A 1 HETATM 14 H HO3 GOL . . . C 2 8.284 12.759 -6.895 1 60.13 ? HO3 GOL 302 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 271 _model_server_stats.encode_time_ms 7 _model_server_stats.element_count 14 #