data_6Z27 # _model_server_result.job_id BS0LO9tYUYVBTBx8JFLjxA _model_server_result.datetime_utc '2024-11-13 06:46:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z27 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":302}' # _entry.id 6Z27 # _exptl.entry_id 6Z27 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 229.402 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'LAURYL DIMETHYLAMINE-N-OXIDE' _entity.pdbx_number_of_molecules 7 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z27 _cell.length_a 99.914 _cell.length_b 99.914 _cell.length_c 234.047 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z27 _symmetry.cell_setting ? _symmetry.Int_Tables_number 94 _symmetry.space_group_name_Hall 'P 4n 2n' _symmetry.space_group_name_H-M 'P 42 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N ? 4 J N N ? 4 N N N ? 4 U N N ? 4 V N N ? 4 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 B NE2 HIS 190 L HIS 190 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.122 ? metalc ? metalc2 B NE2 HIS 230 L HIS 230 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.281 ? metalc ? metalc3 C NE2 HIS 219 M HIS 219 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.183 ? metalc ? metalc4 C OE1 GLU 234 M GLU 234 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.383 ? metalc ? metalc5 C OE2 GLU 234 M GLU 234 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? metalc ? metalc6 C NE2 HIS 266 M HIS 266 1_555 S FE FE . M FE 407 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.192 ? # _chem_comp.formula 'C14 H31 N O' _chem_comp.formula_weight 229.402 _chem_comp.id LDA _chem_comp.mon_nstd_flag . _chem_comp.name 'LAURYL DIMETHYLAMINE-N-OXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 O1 LDA sing 476 n n N1 CM1 LDA sing 477 n n N1 CM2 LDA sing 478 n n N1 C1 LDA sing 479 n n CM1 HM11 LDA sing 480 n n CM1 HM12 LDA sing 481 n n CM1 HM13 LDA sing 482 n n CM2 HM21 LDA sing 483 n n CM2 HM22 LDA sing 484 n n CM2 HM23 LDA sing 485 n n C1 C2 LDA sing 486 n n C1 H11 LDA sing 487 n n C1 H12 LDA sing 488 n n C2 C3 LDA sing 489 n n C2 H21 LDA sing 490 n n C2 H22 LDA sing 491 n n C3 C4 LDA sing 492 n n C3 H31 LDA sing 493 n n C3 H32 LDA sing 494 n n C4 C5 LDA sing 495 n n C4 H41 LDA sing 496 n n C4 H42 LDA sing 497 n n C5 C6 LDA sing 498 n n C5 H51 LDA sing 499 n n C5 H52 LDA sing 500 n n C6 C7 LDA sing 501 n n C6 H61 LDA sing 502 n n C6 H62 LDA sing 503 n n C7 C8 LDA sing 504 n n C7 H71 LDA sing 505 n n C7 H72 LDA sing 506 n n C8 C9 LDA sing 507 n n C8 H81 LDA sing 508 n n C8 H82 LDA sing 509 n n C9 C10 LDA sing 510 n n C9 H91 LDA sing 511 n n C9 H92 LDA sing 512 n n C10 C11 LDA sing 513 n n C10 H101 LDA sing 514 n n C10 H102 LDA sing 515 n n C11 C12 LDA sing 516 n n C11 H111 LDA sing 517 n n C11 H112 LDA sing 518 n n C12 H121 LDA sing 519 n n C12 H122 LDA sing 520 n n C12 H123 LDA sing 521 n n # _atom_sites.entry_id 6Z27 _atom_sites.fract_transf_matrix[1][1] 0.010009 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.010009 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004273 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 LDA H 1 701 701 LDA LDA . E 4 LDA H 1 702 702 LDA LDA . F 5 PO4 H 1 703 3 PO4 PO4 . G 5 PO4 H 1 704 5 PO4 PO4 . H 5 PO4 H 1 705 6 PO4 PO4 . I 6 OLC L 1 301 301 OLC OLC . J 4 LDA L 1 302 401 LDA LDA . K 7 BCL L 1 303 302 BCL BCL . L 8 BPH L 1 304 402 BPH BPH . M 6 OLC M 1 401 401 OLC OLC . N 4 LDA M 1 402 501 LDA LDA . O 7 BCL M 1 403 301 BCL BCL . P 7 BCL M 1 404 303 BCL BCL . Q 7 BCL M 1 405 304 BCL BCL . R 8 BPH M 1 406 401 BPH BPH . S 9 FE M 1 407 500 FE FE . T 10 U10 M 1 408 501 U10 U10 . U 4 LDA M 1 409 705 LDA LDA . V 4 LDA M 1 410 708 LDA LDA . W 4 LDA M 1 411 901 LDA LDA . X 5 PO4 M 1 412 1 PO4 PO4 . Y 5 PO4 M 1 413 2 PO4 PO4 . Z 5 PO4 M 1 414 4 PO4 PO4 . AA 5 PO4 M 1 415 7 PO4 PO4 . BA 5 PO4 M 1 416 8 PO4 PO4 . CA 11 EDO M 1 417 54 EDO EDO . DA 12 HOH H 1 801 90 HOH HOH . DA 12 HOH H 2 802 144 HOH HOH . DA 12 HOH H 3 803 126 HOH HOH . DA 12 HOH H 4 804 97 HOH HOH . DA 12 HOH H 5 805 89 HOH HOH . DA 12 HOH H 6 806 154 HOH HOH . DA 12 HOH H 7 807 146 HOH HOH . DA 12 HOH H 8 808 86 HOH HOH . DA 12 HOH H 9 809 96 HOH HOH . DA 12 HOH H 10 810 72 HOH HOH . DA 12 HOH H 11 811 87 HOH HOH . DA 12 HOH H 12 812 100 HOH HOH . DA 12 HOH H 13 813 16 HOH HOH . DA 12 HOH H 14 814 110 HOH HOH . DA 12 HOH H 15 815 81 HOH HOH . DA 12 HOH H 16 816 56 HOH HOH . DA 12 HOH H 17 817 91 HOH HOH . DA 12 HOH H 18 818 158 HOH HOH . DA 12 HOH H 19 819 151 HOH HOH . DA 12 HOH H 20 820 53 HOH HOH . DA 12 HOH H 21 821 99 HOH HOH . DA 12 HOH H 22 822 49 HOH HOH . DA 12 HOH H 23 823 57 HOH HOH . DA 12 HOH H 24 824 63 HOH HOH . DA 12 HOH H 25 825 139 HOH HOH . DA 12 HOH H 26 826 70 HOH HOH . DA 12 HOH H 27 827 122 HOH HOH . DA 12 HOH H 28 828 118 HOH HOH . DA 12 HOH H 29 829 23 HOH HOH . DA 12 HOH H 30 830 132 HOH HOH . DA 12 HOH H 31 831 153 HOH HOH . DA 12 HOH H 32 832 76 HOH HOH . DA 12 HOH H 33 833 66 HOH HOH . DA 12 HOH H 34 834 142 HOH HOH . DA 12 HOH H 35 835 30 HOH HOH . DA 12 HOH H 36 836 21 HOH HOH . DA 12 HOH H 37 837 75 HOH HOH . DA 12 HOH H 38 838 47 HOH HOH . DA 12 HOH H 39 839 15 HOH HOH . DA 12 HOH H 40 840 60 HOH HOH . DA 12 HOH H 41 841 77 HOH HOH . DA 12 HOH H 42 842 119 HOH HOH . DA 12 HOH H 43 843 42 HOH HOH . DA 12 HOH H 44 844 83 HOH HOH . DA 12 HOH H 45 845 50 HOH HOH . DA 12 HOH H 46 846 45 HOH HOH . DA 12 HOH H 47 847 43 HOH HOH . DA 12 HOH H 48 848 69 HOH HOH . DA 12 HOH H 49 849 32 HOH HOH . DA 12 HOH H 50 850 148 HOH HOH . DA 12 HOH H 51 851 1 HOH HOH . DA 12 HOH H 52 852 157 HOH HOH . DA 12 HOH H 53 853 113 HOH HOH . DA 12 HOH H 54 854 149 HOH HOH . DA 12 HOH H 55 855 137 HOH HOH . DA 12 HOH H 56 856 124 HOH HOH . DA 12 HOH H 57 857 147 HOH HOH . DA 12 HOH H 58 858 84 HOH HOH . DA 12 HOH H 59 859 133 HOH HOH . DA 12 HOH H 60 860 129 HOH HOH . DA 12 HOH H 61 861 79 HOH HOH . DA 12 HOH H 62 862 111 HOH HOH . DA 12 HOH H 63 863 2 HOH HOH . DA 12 HOH H 64 864 160 HOH HOH . DA 12 HOH H 65 865 121 HOH HOH . DA 12 HOH H 66 866 140 HOH HOH . DA 12 HOH H 67 867 109 HOH HOH . EA 12 HOH L 1 401 101 HOH HOH . EA 12 HOH L 2 402 103 HOH HOH . EA 12 HOH L 3 403 125 HOH HOH . EA 12 HOH L 4 404 7 HOH HOH . EA 12 HOH L 5 405 51 HOH HOH . EA 12 HOH L 6 406 44 HOH HOH . EA 12 HOH L 7 407 117 HOH HOH . EA 12 HOH L 8 408 92 HOH HOH . EA 12 HOH L 9 409 88 HOH HOH . EA 12 HOH L 10 410 12 HOH HOH . EA 12 HOH L 11 411 14 HOH HOH . EA 12 HOH L 12 412 62 HOH HOH . EA 12 HOH L 13 413 8 HOH HOH . EA 12 HOH L 14 414 135 HOH HOH . EA 12 HOH L 15 415 65 HOH HOH . EA 12 HOH L 16 416 54 HOH HOH . EA 12 HOH L 17 417 141 HOH HOH . EA 12 HOH L 18 418 29 HOH HOH . EA 12 HOH L 19 419 3 HOH HOH . EA 12 HOH L 20 420 136 HOH HOH . EA 12 HOH L 21 421 150 HOH HOH . EA 12 HOH L 22 422 155 HOH HOH . EA 12 HOH L 23 423 20 HOH HOH . EA 12 HOH L 24 424 39 HOH HOH . EA 12 HOH L 25 425 159 HOH HOH . EA 12 HOH L 26 426 93 HOH HOH . EA 12 HOH L 27 427 6 HOH HOH . EA 12 HOH L 28 428 120 HOH HOH . EA 12 HOH L 29 429 5 HOH HOH . EA 12 HOH L 30 430 59 HOH HOH . EA 12 HOH L 31 431 52 HOH HOH . EA 12 HOH L 32 432 11 HOH HOH . EA 12 HOH L 33 433 138 HOH HOH . EA 12 HOH L 34 434 10 HOH HOH . EA 12 HOH L 35 435 67 HOH HOH . EA 12 HOH L 36 436 105 HOH HOH . EA 12 HOH L 37 437 85 HOH HOH . EA 12 HOH L 38 438 95 HOH HOH . EA 12 HOH L 39 439 131 HOH HOH . EA 12 HOH L 40 440 104 HOH HOH . EA 12 HOH L 41 441 74 HOH HOH . EA 12 HOH L 42 442 114 HOH HOH . EA 12 HOH L 43 443 127 HOH HOH . EA 12 HOH L 44 444 78 HOH HOH . EA 12 HOH L 45 445 33 HOH HOH . EA 12 HOH L 46 446 107 HOH HOH . EA 12 HOH L 47 447 130 HOH HOH . FA 12 HOH M 1 501 143 HOH HOH . FA 12 HOH M 2 502 123 HOH HOH . FA 12 HOH M 3 503 68 HOH HOH . FA 12 HOH M 4 504 58 HOH HOH . FA 12 HOH M 5 505 46 HOH HOH . FA 12 HOH M 6 506 112 HOH HOH . FA 12 HOH M 7 507 36 HOH HOH . FA 12 HOH M 8 508 48 HOH HOH . FA 12 HOH M 9 509 156 HOH HOH . FA 12 HOH M 10 510 115 HOH HOH . FA 12 HOH M 11 511 71 HOH HOH . FA 12 HOH M 12 512 55 HOH HOH . FA 12 HOH M 13 513 94 HOH HOH . FA 12 HOH M 14 514 27 HOH HOH . FA 12 HOH M 15 515 102 HOH HOH . FA 12 HOH M 16 516 35 HOH HOH . FA 12 HOH M 17 517 25 HOH HOH . FA 12 HOH M 18 518 40 HOH HOH . FA 12 HOH M 19 519 128 HOH HOH . FA 12 HOH M 20 520 64 HOH HOH . FA 12 HOH M 21 521 38 HOH HOH . FA 12 HOH M 22 522 145 HOH HOH . FA 12 HOH M 23 523 61 HOH HOH . FA 12 HOH M 24 524 28 HOH HOH . FA 12 HOH M 25 525 19 HOH HOH . FA 12 HOH M 26 526 34 HOH HOH . FA 12 HOH M 27 527 31 HOH HOH . FA 12 HOH M 28 528 37 HOH HOH . FA 12 HOH M 29 529 9 HOH HOH . FA 12 HOH M 30 530 17 HOH HOH . FA 12 HOH M 31 531 106 HOH HOH . FA 12 HOH M 32 532 18 HOH HOH . FA 12 HOH M 33 533 24 HOH HOH . FA 12 HOH M 34 534 116 HOH HOH . FA 12 HOH M 35 535 73 HOH HOH . FA 12 HOH M 36 536 108 HOH HOH . FA 12 HOH M 37 537 80 HOH HOH . FA 12 HOH M 38 538 4 HOH HOH . FA 12 HOH M 39 539 13 HOH HOH . FA 12 HOH M 40 540 22 HOH HOH . FA 12 HOH M 41 541 41 HOH HOH . FA 12 HOH M 42 542 82 HOH HOH . FA 12 HOH M 43 543 134 HOH HOH . FA 12 HOH M 44 544 26 HOH HOH . FA 12 HOH M 45 545 152 HOH HOH . FA 12 HOH M 46 546 98 HOH HOH . FA 12 HOH M 47 547 161 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 LDA . . . J 4 43.144 -18.903 -11.852 1 88.09 ? N1 LDA 302 L 1 HETATM 2 O O1 LDA . . . J 4 42.416 -19.865 -11.504 1 80.52 ? O1 LDA 302 L 1 HETATM 3 C CM1 LDA . . . J 4 44.084 -18.574 -10.761 1 84.81 ? CM1 LDA 302 L 1 HETATM 4 C CM2 LDA . . . J 4 43.919 -19.315 -13.038 1 87.75 ? CM2 LDA 302 L 1 HETATM 5 C C1 LDA . . . J 4 42.337 -17.718 -12.156 1 80.62 ? C1 LDA 302 L 1 HETATM 6 C C2 LDA . . . J 4 41.408 -18.053 -13.326 1 76.35 ? C2 LDA 302 L 1 HETATM 7 C C3 LDA . . . J 4 41.071 -16.83 -14.184 1 78.48 ? C3 LDA 302 L 1 HETATM 8 C C4 LDA . . . J 4 39.682 -16.269 -13.85 1 76.73 ? C4 LDA 302 L 1 HETATM 9 C C5 LDA . . . J 4 38.933 -15.751 -15.085 1 78.72 ? C5 LDA 302 L 1 HETATM 10 C C6 LDA . . . J 4 37.405 -15.775 -14.907 1 77.8 ? C6 LDA 302 L 1 HETATM 11 C C7 LDA . . . J 4 36.654 -16.133 -16.202 1 69.16 ? C7 LDA 302 L 1 HETATM 12 C C8 LDA . . . J 4 35.43 -16.986 -15.872 1 67.29 ? C8 LDA 302 L 1 HETATM 13 C C9 LDA . . . J 4 34.389 -17.15 -16.994 1 69.83 ? C9 LDA 302 L 1 HETATM 14 C C10 LDA . . . J 4 34.615 -16.32 -18.26 1 68.54 ? C10 LDA 302 L 1 HETATM 15 C C11 LDA . . . J 4 33.739 -16.83 -19.412 1 66.12 ? C11 LDA 302 L 1 HETATM 16 C C12 LDA . . . J 4 34.454 -16.776 -20.772 1 63.57 ? C12 LDA 302 L 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 334 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 16 #