data_6Z2V
#
_model_server_result.job_id            uqFMq6WhC1M18395cO1rXg 
_model_server_result.datetime_utc      '2024-11-26 16:05:34' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6z2v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":501}' 
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_entry.id    6Z2V 
#
_exptl.entry_id    6Z2V 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              363.241 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(4~{S})-7,8-bis(chloranyl)-9-methyl-1-oxidanylidene-spiro[2,4-dihydropyrido[3,4-b]indole-3,4'-piperidine]-4-carbonitrile" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          111.16 
_cell.angle_gamma         90 
_cell.entry_id            6Z2V 
_cell.length_a            84.376 
_cell.length_b            45.393 
_cell.length_c            106.334 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6Z2V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C17 H16 Cl2 N4 O' 
_chem_comp.formula_weight    363.241 
_chem_comp.id                KHC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(4~{S})-7,8-bis(chloranyl)-9-methyl-1-oxidanylidene-spiro[2,4-dihydropyrido[3,4-b]indole-3,4'-piperidine]-4-carbonitrile" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N2 C6 KHC sing 182 n n 
N2 C5 KHC sing 183 n n 
C6 C7 KHC sing 184 n n 
C5 C4 KHC sing 185 n n 
C7 C3 KHC sing 186 n n 
C4 C3 KHC sing 187 n n 
C3 N1 KHC sing 188 n n 
C3 C8 KHC sing 189 n n 
N1 C2 KHC sing 190 n n 
N3 C9 KHC trip 191 n n 
C9 C8 KHC sing 192 n n 
C8 C10 KHC sing 193 n n 
C2 O KHC doub 194 n n 
C2 C1 KHC sing 195 n n 
C10 C1 KHC doub 196 n y 
C10 C11 KHC sing 197 n y 
C1 N KHC sing 198 n y 
C11 C12 KHC doub 199 n y 
C11 C16 KHC sing 200 n y 
N C KHC sing 201 n n 
N C16 KHC sing 202 n y 
C12 C13 KHC sing 203 n y 
C16 C15 KHC doub 204 n y 
C13 C14 KHC doub 205 n y 
C15 C14 KHC sing 206 n y 
C15 CL1 KHC sing 207 n n 
C14 CL KHC sing 208 n n 
C13 H1 KHC sing 209 n n 
C12 H2 KHC sing 210 n n 
C H3 KHC sing 211 n n 
C H4 KHC sing 212 n n 
C H5 KHC sing 213 n n 
C8 H6 KHC sing 214 n n 
N1 H7 KHC sing 215 n n 
C7 H8 KHC sing 216 n n 
C7 H9 KHC sing 217 n n 
C6 H10 KHC sing 218 n n 
C6 H11 KHC sing 219 n n 
N2 H12 KHC sing 220 n n 
C5 H14 KHC sing 221 n n 
C5 H15 KHC sing 222 n n 
C4 H16 KHC sing 223 n n 
C4 H17 KHC sing 224 n n 
#
_atom_sites.entry_id                     6Z2V 
_atom_sites.fract_transf_matrix[1][1]    0.011852 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.004587 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.02203 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010084 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 KHC A 1 501 501 KHC KHC . 
C 3 K A 1 502 101 K K . 
D 4 EDO A 1 503 501 EDO EDO . 
E 5 HOH A 1 601 58 HOH HOH . 
E 5 HOH A 2 602 47 HOH HOH . 
E 5 HOH A 3 603 52 HOH HOH . 
E 5 HOH A 4 604 4 HOH HOH . 
E 5 HOH A 5 605 38 HOH HOH . 
E 5 HOH A 6 606 11 HOH HOH . 
E 5 HOH A 7 607 18 HOH HOH . 
E 5 HOH A 8 608 53 HOH HOH . 
E 5 HOH A 9 609 62 HOH HOH . 
E 5 HOH A 10 610 54 HOH HOH . 
E 5 HOH A 11 611 48 HOH HOH . 
E 5 HOH A 12 612 1 HOH HOH . 
E 5 HOH A 13 613 55 HOH HOH . 
E 5 HOH A 14 614 36 HOH HOH . 
E 5 HOH A 15 615 42 HOH HOH . 
E 5 HOH A 16 616 14 HOH HOH . 
E 5 HOH A 17 617 5 HOH HOH . 
E 5 HOH A 18 618 3 HOH HOH . 
E 5 HOH A 19 619 33 HOH HOH . 
E 5 HOH A 20 620 56 HOH HOH . 
E 5 HOH A 21 621 57 HOH HOH . 
E 5 HOH A 22 622 63 HOH HOH . 
E 5 HOH A 23 623 41 HOH HOH . 
E 5 HOH A 24 624 12 HOH HOH . 
E 5 HOH A 25 625 17 HOH HOH . 
E 5 HOH A 26 626 29 HOH HOH . 
E 5 HOH A 27 627 20 HOH HOH . 
E 5 HOH A 28 628 19 HOH HOH . 
E 5 HOH A 29 629 23 HOH HOH . 
E 5 HOH A 30 630 49 HOH HOH . 
E 5 HOH A 31 631 35 HOH HOH . 
E 5 HOH A 32 632 7 HOH HOH . 
E 5 HOH A 33 633 10 HOH HOH . 
E 5 HOH A 34 634 31 HOH HOH . 
E 5 HOH A 35 635 13 HOH HOH . 
E 5 HOH A 36 636 2 HOH HOH . 
E 5 HOH A 37 637 50 HOH HOH . 
E 5 HOH A 38 638 21 HOH HOH . 
E 5 HOH A 39 639 6 HOH HOH . 
E 5 HOH A 40 640 34 HOH HOH . 
E 5 HOH A 41 641 39 HOH HOH . 
E 5 HOH A 42 642 59 HOH HOH . 
E 5 HOH A 43 643 8 HOH HOH . 
E 5 HOH A 44 644 43 HOH HOH . 
E 5 HOH A 45 645 25 HOH HOH . 
E 5 HOH A 46 646 45 HOH HOH . 
E 5 HOH A 47 647 22 HOH HOH . 
E 5 HOH A 48 648 32 HOH HOH . 
E 5 HOH A 49 649 30 HOH HOH . 
E 5 HOH A 50 650 37 HOH HOH . 
E 5 HOH A 51 651 46 HOH HOH . 
E 5 HOH A 52 652 24 HOH HOH . 
E 5 HOH A 53 653 15 HOH HOH . 
E 5 HOH A 54 654 9 HOH HOH . 
E 5 HOH A 55 655 16 HOH HOH . 
E 5 HOH A 56 656 27 HOH HOH . 
E 5 HOH A 57 657 44 HOH HOH . 
E 5 HOH A 58 658 26 HOH HOH . 
E 5 HOH A 59 659 61 HOH HOH . 
E 5 HOH A 60 660 60 HOH HOH . 
E 5 HOH A 61 661 51 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 CL CL1 KHC . . . B 2 81.89 18.667 89.363 1 52.21 ? CL1 KHC 501 A 1 
HETATM 2 C C15 KHC . . . B 2 81.325 17.062 89.077 1 55.46 ? C15 KHC 501 A 1 
HETATM 3 C C14 KHC . . . B 2 80.822 16.718 87.83 1 52.29 ? C14 KHC 501 A 1 
HETATM 4 CL CL KHC . . . B 2 80.802 17.878 86.553 1 45.41 ? CL KHC 501 A 1 
HETATM 5 C C13 KHC . . . B 2 80.41 15.416 87.565 1 52.57 ? C13 KHC 501 A 1 
HETATM 6 C C12 KHC . . . B 2 80.519 14.44 88.536 1 53.76 ? C12 KHC 501 A 1 
HETATM 7 C C16 KHC . . . B 2 81.438 16.083 90.06 1 57.64 ? C16 KHC 501 A 1 
HETATM 8 N N KHC . . . B 2 82.007 16.124 91.328 1 54.4 ? N KHC 501 A 1 
HETATM 9 C C KHC . . . B 2 82.579 17.317 91.951 1 50.44 ? C KHC 501 A 1 
HETATM 10 C C11 KHC . . . B 2 81.04 14.752 89.791 1 57.96 ? C11 KHC 501 A 1 
HETATM 11 C C10 KHC . . . B 2 81.386 13.984 90.95 1 62.84 ? C10 KHC 501 A 1 
HETATM 12 C C1 KHC . . . B 2 81.979 14.839 91.851 1 59.82 ? C1 KHC 501 A 1 
HETATM 13 C C8 KHC . . . B 2 81.22 12.498 91.249 1 68.56 ? C8 KHC 501 A 1 
HETATM 14 C C9 KHC . . . B 2 80.215 11.834 90.411 1 69.05 ? C9 KHC 501 A 1 
HETATM 15 N N3 KHC . . . B 2 79.472 11.236 89.786 1 65.81 ? N3 KHC 501 A 1 
HETATM 16 C C3 KHC . . . B 2 80.795 12.463 92.737 1 72.07 ? C3 KHC 501 A 1 
HETATM 17 N N1 KHC . . . B 2 81.896 13.132 93.457 1 78.9 ? N1 KHC 501 A 1 
HETATM 18 C C2 KHC . . . B 2 82.516 14.259 93.054 1 65.71 ? C2 KHC 501 A 1 
HETATM 19 O O KHC . . . B 2 83.514 14.672 93.644 1 66.33 ? O KHC 501 A 1 
HETATM 20 C C7 KHC . . . B 2 80.746 11.002 93.215 1 67.53 ? C7 KHC 501 A 1 
HETATM 21 C C6 KHC . . . B 2 79.737 10.633 94.283 1 66.98 ? C6 KHC 501 A 1 
HETATM 22 N N2 KHC . . . B 2 79.054 11.801 94.851 1 71.46 ? N2 KHC 501 A 1 
HETATM 23 C C5 KHC . . . B 2 78.465 12.626 93.802 1 70.66 ? C5 KHC 501 A 1 
HETATM 24 C C4 KHC . . . B 2 79.523 13.3 92.956 1 68 ? C4 KHC 501 A 1 
#
_model_server_stats.io_time_ms              74 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           24 
#