data_6Z4B # _model_server_result.job_id v8XTrasUa8X4adTpGM4cLQ _model_server_result.datetime_utc '2024-10-10 14:20:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z4b # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":1102}' # _entry.id 6Z4B # _exptl.entry_id 6Z4B _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 383.396 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-(5-fluoro-2-hydroxyphenyl)-2-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)-N-(1,3-thiazol-2-yl)acetamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z4B _cell.length_a 76.2 _cell.length_b 79.7 _cell.length_c 89.2 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z4B _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,Q 1 1 B,K,L,M,N,O,P,R 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 L N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 108 A CYS 797 1_555 C C32 Q6K . A Q6K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.822 ? covale ? covale2 B SG CYS 108 B CYS 797 1_555 K C32 Q6K . B Q6K 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.826 ? # _chem_comp.formula 'C19 H14 F N3 O3 S' _chem_comp.formula_weight 383.396 _chem_comp.id 9LL _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-(5-fluoro-2-hydroxyphenyl)-2-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)-N-(1,3-thiazol-2-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O01 C02 9LL sing 1 n n C03 C02 9LL doub 2 n y C03 C04 9LL sing 3 n y C02 C08 9LL sing 4 n y O27 C19 9LL doub 5 n n C04 C05 9LL doub 6 n y C19 N18 9LL sing 7 n n C19 C20 9LL sing 8 n n C08 C09 9LL sing 9 n n C08 C07 9LL doub 10 n y C09 N18 9LL sing 11 n n C09 C10 9LL sing 12 n n C21 C20 9LL doub 13 n y C21 C22 9LL sing 14 n y N18 C26 9LL sing 15 n n C20 C25 9LL sing 16 n y C22 C23 9LL doub 17 n y C26 C25 9LL sing 18 n n C25 C24 9LL doub 19 n y C05 C07 9LL sing 20 n y C05 F06 9LL sing 21 n n C23 C24 9LL sing 22 n y N11 C10 9LL sing 23 n n N11 C12 9LL sing 24 n n C10 O17 9LL doub 25 n n C12 N13 9LL doub 26 n y C12 S16 9LL sing 27 n y N13 C14 9LL sing 28 n y C14 C15 9LL doub 29 n y S16 C15 9LL sing 30 n y C15 H1 9LL sing 31 n n C21 H2 9LL sing 32 n n C22 H3 9LL sing 33 n n C24 H4 9LL sing 34 n n C26 H5 9LL sing 35 n n C26 H6 9LL sing 36 n n C03 H7 9LL sing 37 n n C04 H8 9LL sing 38 n n C07 H9 9LL sing 39 n n C09 H10 9LL sing 40 n n C14 H11 9LL sing 41 n n C23 H12 9LL sing 42 n n N11 H13 9LL sing 43 n n O01 H14 9LL sing 44 n n # _atom_sites.entry_id 6Z4B _atom_sites.fract_transf_matrix[1][1] 0.013123 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012547 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011211 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 Q6K A 1 1101 1001 Q6K LIG . D 3 9LL A 1 1102 1101 9LL EAI . E 4 SO4 A 1 1103 4 SO4 SO4 . F 4 SO4 A 1 1104 5 SO4 SO4 . G 4 SO4 A 1 1105 6 SO4 SO4 . H 4 SO4 A 1 1106 7 SO4 SO4 . I 4 SO4 A 1 1107 8 SO4 SO4 . J 4 SO4 A 1 1108 9 SO4 SO4 . K 2 Q6K B 1 1101 1001 Q6K LIG . L 3 9LL B 1 1102 1101 9LL EAI . M 4 SO4 B 1 1103 1 SO4 SO4 . N 4 SO4 B 1 1104 3 SO4 SO4 . O 4 SO4 B 1 1105 10 SO4 SO4 . P 4 SO4 B 1 1106 11 SO4 SO4 . Q 5 HOH A 1 1201 36 HOH HOH . Q 5 HOH A 2 1202 28 HOH HOH . Q 5 HOH A 3 1203 3 HOH HOH . Q 5 HOH A 4 1204 32 HOH HOH . Q 5 HOH A 5 1205 13 HOH HOH . Q 5 HOH A 6 1206 5 HOH HOH . Q 5 HOH A 7 1207 40 HOH HOH . Q 5 HOH A 8 1208 39 HOH HOH . Q 5 HOH A 9 1209 4 HOH HOH . Q 5 HOH A 10 1210 22 HOH HOH . Q 5 HOH A 11 1211 25 HOH HOH . Q 5 HOH A 12 1212 24 HOH HOH . Q 5 HOH A 13 1213 42 HOH HOH . Q 5 HOH A 14 1214 41 HOH HOH . Q 5 HOH A 15 1215 15 HOH HOH . Q 5 HOH A 16 1216 14 HOH HOH . Q 5 HOH A 17 1217 10 HOH HOH . Q 5 HOH A 18 1218 20 HOH HOH . Q 5 HOH A 19 1219 38 HOH HOH . R 5 HOH B 1 1201 33 HOH HOH . R 5 HOH B 2 1202 23 HOH HOH . R 5 HOH B 3 1203 16 HOH HOH . R 5 HOH B 4 1204 26 HOH HOH . R 5 HOH B 5 1205 29 HOH HOH . R 5 HOH B 6 1206 34 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 9LL . . . D 3 43.873 -2.843 -1.545 1 50.25 ? C10 9LL 1102 A 1 HETATM 2 C C15 9LL . . . D 3 42.28 -6.865 0.347 1 45.06 ? C15 9LL 1102 A 1 HETATM 3 C C20 9LL . . . D 3 45.773 0.767 0.208 1 51.59 ? C20 9LL 1102 A 1 HETATM 4 C C21 9LL . . . D 3 46.604 1.332 1.187 1 51.47 ? C21 9LL 1102 A 1 HETATM 5 C C22 9LL . . . D 3 46.238 2.532 1.779 1 50.72 ? C22 9LL 1102 A 1 HETATM 6 C C24 9LL . . . D 3 44.221 2.604 0.427 1 50.1 ? C24 9LL 1102 A 1 HETATM 7 C C26 9LL . . . D 3 43.923 0.542 -1.238 1 51.62 ? C26 9LL 1102 A 1 HETATM 8 C C02 9LL . . . D 3 43.957 -0.315 -4.491 1 49.47 ? C02 9LL 1102 A 1 HETATM 9 C C03 9LL . . . D 3 43.033 0.065 -5.499 1 50.37 ? C03 9LL 1102 A 1 HETATM 10 C C04 9LL . . . D 3 41.81 -0.458 -5.517 1 49.71 ? C04 9LL 1102 A 1 HETATM 11 C C05 9LL . . . D 3 41.41 -1.418 -4.51 1 48.98 ? C05 9LL 1102 A 1 HETATM 12 C C07 9LL . . . D 3 42.31 -1.787 -3.52 1 48.86 ? C07 9LL 1102 A 1 HETATM 13 C C08 9LL . . . D 3 43.568 -1.251 -3.508 1 49.71 ? C08 9LL 1102 A 1 HETATM 14 C C09 9LL . . . D 3 44.528 -1.692 -2.396 1 50.91 ? C09 9LL 1102 A 1 HETATM 15 C C12 9LL . . . D 3 43.474 -5.391 -1.198 1 46.15 ? C12 9LL 1102 A 1 HETATM 16 C C14 9LL . . . D 3 42.984 -7.61 -0.615 1 45.54 ? C14 9LL 1102 A 1 HETATM 17 C C19 9LL . . . D 3 45.913 -0.514 -0.607 1 51.98 ? C19 9LL 1102 A 1 HETATM 18 C C23 9LL . . . D 3 45.046 3.173 1.401 1 50.3 ? C23 9LL 1102 A 1 HETATM 19 C C25 9LL . . . D 3 44.592 1.395 -0.17 1 51 ? C25 9LL 1102 A 1 HETATM 20 F F06 9LL . . . D 3 40.125 -1.97 -4.53 1 49.4 ? F06 9LL 1102 A 1 HETATM 21 N N11 9LL . . . D 3 44.066 -4.249 -1.948 1 48.14 ? N11 9LL 1102 A 1 HETATM 22 N N13 9LL . . . D 3 43.692 -6.722 -1.529 1 45.74 ? N13 9LL 1102 A 1 HETATM 23 N N18 9LL . . . D 3 44.774 -0.614 -1.473 1 51.85 ? N18 9LL 1102 A 1 HETATM 24 O O01 9LL . . . D 3 45.288 0.261 -4.475 1 48.58 ? O01 9LL 1102 A 1 HETATM 25 O O17 9LL . . . D 3 43.219 -2.541 -0.586 1 51.07 ? O17 9LL 1102 A 1 HETATM 26 O O27 9LL . . . D 3 46.778 -1.257 -0.534 1 52.02 ? O27 9LL 1102 A 1 HETATM 27 S S16 9LL . . . D 3 42.505 -5.304 0.091 1 44.82 ? S16 9LL 1102 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 27 #