data_6Z4D # _model_server_result.job_id 26yE_khFQq1WafGbtSiA9Q _model_server_result.datetime_utc '2024-10-10 12:13:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z4d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":1102}' # _entry.id 6Z4D # _exptl.entry_id 6Z4D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 349.406 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2R)-2-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)-2-phenyl-N-(1,3-thiazol-2-yl)acetamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z4D _cell.length_a 76.61 _cell.length_b 83.9 _cell.length_c 89.27 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z4D _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,K 1 1 B,F,G,H,I,J,L 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id G _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 108 A CYS 797 1_555 C C29 8BS . A 8BS 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.798 ? covale ? covale2 B SG CYS 108 B CYS 797 1_555 F C29 8BS . B 8BS 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.82 ? # _chem_comp.formula 'C19 H15 N3 O2 S' _chem_comp.formula_weight 349.406 _chem_comp.id 57N _chem_comp.mon_nstd_flag . _chem_comp.name (2R)-2-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)-2-phenyl-N-(1,3-thiazol-2-yl)acetamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C17 S18 57N sing 1 n y C17 C16 57N doub 2 n y S18 C14 57N sing 3 n y C16 N15 57N sing 4 n y O13 C11 57N doub 5 n n C20 C19 57N doub 6 n y C20 C21 57N sing 7 n y C14 N15 57N doub 8 n y C14 N12 57N sing 9 n n C19 C10 57N sing 10 n y C05 C06 57N doub 11 n y C05 C04 57N sing 12 n y C21 C22 57N doub 13 n y C24 C04 57N sing 14 n n C24 N25 57N sing 15 n n C11 N12 57N sing 16 n n C11 C09 57N sing 17 n n C06 C01 57N sing 18 n y C04 C03 57N doub 19 n y C10 C09 57N sing 20 n n C10 C23 57N doub 21 n y N25 C09 57N sing 22 n n N25 C07 57N sing 23 n n C22 C23 57N sing 24 n y C01 C02 57N doub 25 n y C03 C07 57N sing 26 n n C03 C02 57N sing 27 n y C07 O08 57N doub 28 n n C01 H1 57N sing 29 n n C02 H2 57N sing 30 n n C05 H3 57N sing 31 n n C06 H4 57N sing 32 n n C09 H5 57N sing 33 n n N12 H6 57N sing 34 n n C16 H7 57N sing 35 n n C17 H8 57N sing 36 n n C19 H9 57N sing 37 n n C20 H10 57N sing 38 n n C21 H11 57N sing 39 n n C22 H12 57N sing 40 n n C23 H13 57N sing 41 n n C24 H14 57N sing 42 n n C24 H15 57N sing 43 n n # _atom_sites.entry_id 6Z4D _atom_sites.fract_transf_matrix[1][1] 0.013053 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011919 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011202 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 8BS A 1 1101 1101 8BS LIG . D 3 SO4 A 1 1102 2 SO4 SO4 . E 3 SO4 A 1 1103 4 SO4 SO4 . F 2 8BS B 1 1101 1101 8BS LIG . G 4 57N B 1 1102 1101 57N EAI . H 3 SO4 B 1 1103 1 SO4 SO4 . I 3 SO4 B 1 1104 3 SO4 SO4 . J 3 SO4 B 1 1105 5 SO4 SO4 . K 5 HOH A 1 1201 195 HOH HOH . K 5 HOH A 2 1202 107 HOH HOH . K 5 HOH A 3 1203 94 HOH HOH . K 5 HOH A 4 1204 84 HOH HOH . K 5 HOH A 5 1205 120 HOH HOH . K 5 HOH A 6 1206 192 HOH HOH . K 5 HOH A 7 1207 50 HOH HOH . K 5 HOH A 8 1208 105 HOH HOH . K 5 HOH A 9 1209 121 HOH HOH . K 5 HOH A 10 1210 20 HOH HOH . K 5 HOH A 11 1211 112 HOH HOH . K 5 HOH A 12 1212 154 HOH HOH . K 5 HOH A 13 1213 37 HOH HOH . K 5 HOH A 14 1214 98 HOH HOH . K 5 HOH A 15 1215 17 HOH HOH . K 5 HOH A 16 1216 65 HOH HOH . K 5 HOH A 17 1217 190 HOH HOH . K 5 HOH A 18 1218 116 HOH HOH . K 5 HOH A 19 1219 51 HOH HOH . K 5 HOH A 20 1220 169 HOH HOH . K 5 HOH A 21 1221 101 HOH HOH . K 5 HOH A 22 1222 87 HOH HOH . K 5 HOH A 23 1223 111 HOH HOH . K 5 HOH A 24 1224 177 HOH HOH . K 5 HOH A 25 1225 81 HOH HOH . K 5 HOH A 26 1226 187 HOH HOH . K 5 HOH A 27 1227 96 HOH HOH . K 5 HOH A 28 1228 78 HOH HOH . K 5 HOH A 29 1229 25 HOH HOH . K 5 HOH A 30 1230 21 HOH HOH . K 5 HOH A 31 1231 176 HOH HOH . K 5 HOH A 32 1232 35 HOH HOH . K 5 HOH A 33 1233 196 HOH HOH . K 5 HOH A 34 1234 145 HOH HOH . K 5 HOH A 35 1235 104 HOH HOH . K 5 HOH A 36 1236 18 HOH HOH . K 5 HOH A 37 1237 26 HOH HOH . K 5 HOH A 38 1238 10 HOH HOH . K 5 HOH A 39 1239 29 HOH HOH . K 5 HOH A 40 1240 46 HOH HOH . K 5 HOH A 41 1241 48 HOH HOH . K 5 HOH A 42 1242 2 HOH HOH . K 5 HOH A 43 1243 163 HOH HOH . K 5 HOH A 44 1244 103 HOH HOH . K 5 HOH A 45 1245 85 HOH HOH . K 5 HOH A 46 1246 19 HOH HOH . K 5 HOH A 47 1247 92 HOH HOH . K 5 HOH A 48 1248 27 HOH HOH . K 5 HOH A 49 1249 15 HOH HOH . K 5 HOH A 50 1250 117 HOH HOH . K 5 HOH A 51 1251 5 HOH HOH . K 5 HOH A 52 1252 49 HOH HOH . K 5 HOH A 53 1253 69 HOH HOH . K 5 HOH A 54 1254 93 HOH HOH . K 5 HOH A 55 1255 178 HOH HOH . K 5 HOH A 56 1256 28 HOH HOH . K 5 HOH A 57 1257 47 HOH HOH . K 5 HOH A 58 1258 110 HOH HOH . K 5 HOH A 59 1259 30 HOH HOH . K 5 HOH A 60 1260 108 HOH HOH . K 5 HOH A 61 1261 31 HOH HOH . K 5 HOH A 62 1262 64 HOH HOH . K 5 HOH A 63 1263 188 HOH HOH . K 5 HOH A 64 1264 22 HOH HOH . K 5 HOH A 65 1265 102 HOH HOH . K 5 HOH A 66 1266 8 HOH HOH . K 5 HOH A 67 1267 167 HOH HOH . K 5 HOH A 68 1268 9 HOH HOH . K 5 HOH A 69 1269 66 HOH HOH . K 5 HOH A 70 1270 106 HOH HOH . K 5 HOH A 71 1271 118 HOH HOH . K 5 HOH A 72 1272 71 HOH HOH . K 5 HOH A 73 1273 182 HOH HOH . K 5 HOH A 74 1274 183 HOH HOH . K 5 HOH A 75 1275 109 HOH HOH . K 5 HOH A 76 1276 52 HOH HOH . K 5 HOH A 77 1277 6 HOH HOH . K 5 HOH A 78 1278 79 HOH HOH . K 5 HOH A 79 1279 168 HOH HOH . K 5 HOH A 80 1280 191 HOH HOH . K 5 HOH A 81 1281 181 HOH HOH . K 5 HOH A 82 1282 75 HOH HOH . K 5 HOH A 83 1283 11 HOH HOH . K 5 HOH A 84 1284 1 HOH HOH . K 5 HOH A 85 1285 193 HOH HOH . K 5 HOH A 86 1286 38 HOH HOH . K 5 HOH A 87 1287 194 HOH HOH . K 5 HOH A 88 1288 58 HOH HOH . K 5 HOH A 89 1289 91 HOH HOH . K 5 HOH A 90 1290 200 HOH HOH . K 5 HOH A 91 1291 40 HOH HOH . K 5 HOH A 92 1292 97 HOH HOH . K 5 HOH A 93 1293 95 HOH HOH . K 5 HOH A 94 1294 80 HOH HOH . K 5 HOH A 95 1295 197 HOH HOH . K 5 HOH A 96 1296 62 HOH HOH . K 5 HOH A 97 1297 76 HOH HOH . K 5 HOH A 98 1298 100 HOH HOH . K 5 HOH A 99 1299 113 HOH HOH . L 5 HOH B 1 1201 124 HOH HOH . L 5 HOH B 2 1202 43 HOH HOH . L 5 HOH B 3 1203 157 HOH HOH . L 5 HOH B 4 1204 158 HOH HOH . L 5 HOH B 5 1205 129 HOH HOH . L 5 HOH B 6 1206 144 HOH HOH . L 5 HOH B 7 1207 143 HOH HOH . L 5 HOH B 8 1208 140 HOH HOH . L 5 HOH B 9 1209 88 HOH HOH . L 5 HOH B 10 1210 44 HOH HOH . L 5 HOH B 11 1211 146 HOH HOH . L 5 HOH B 12 1212 150 HOH HOH . L 5 HOH B 13 1213 70 HOH HOH . L 5 HOH B 14 1214 3 HOH HOH . L 5 HOH B 15 1215 201 HOH HOH . L 5 HOH B 16 1216 68 HOH HOH . L 5 HOH B 17 1217 147 HOH HOH . L 5 HOH B 18 1218 7 HOH HOH . L 5 HOH B 19 1219 172 HOH HOH . L 5 HOH B 20 1220 155 HOH HOH . L 5 HOH B 21 1221 90 HOH HOH . L 5 HOH B 22 1222 83 HOH HOH . L 5 HOH B 23 1223 42 HOH HOH . L 5 HOH B 24 1224 41 HOH HOH . L 5 HOH B 25 1225 14 HOH HOH . L 5 HOH B 26 1226 36 HOH HOH . L 5 HOH B 27 1227 33 HOH HOH . L 5 HOH B 28 1228 132 HOH HOH . L 5 HOH B 29 1229 127 HOH HOH . L 5 HOH B 30 1230 161 HOH HOH . L 5 HOH B 31 1231 23 HOH HOH . L 5 HOH B 32 1232 162 HOH HOH . L 5 HOH B 33 1233 134 HOH HOH . L 5 HOH B 34 1234 32 HOH HOH . L 5 HOH B 35 1235 89 HOH HOH . L 5 HOH B 36 1236 12 HOH HOH . L 5 HOH B 37 1237 128 HOH HOH . L 5 HOH B 38 1238 4 HOH HOH . L 5 HOH B 39 1239 63 HOH HOH . L 5 HOH B 40 1240 24 HOH HOH . L 5 HOH B 41 1241 74 HOH HOH . L 5 HOH B 42 1242 131 HOH HOH . L 5 HOH B 43 1243 160 HOH HOH . L 5 HOH B 44 1244 57 HOH HOH . L 5 HOH B 45 1245 53 HOH HOH . L 5 HOH B 46 1246 54 HOH HOH . L 5 HOH B 47 1247 130 HOH HOH . L 5 HOH B 48 1248 170 HOH HOH . L 5 HOH B 49 1249 61 HOH HOH . L 5 HOH B 50 1250 125 HOH HOH . L 5 HOH B 51 1251 135 HOH HOH . L 5 HOH B 52 1252 149 HOH HOH . L 5 HOH B 53 1253 164 HOH HOH . L 5 HOH B 54 1254 123 HOH HOH . L 5 HOH B 55 1255 86 HOH HOH . L 5 HOH B 56 1256 199 HOH HOH . L 5 HOH B 57 1257 13 HOH HOH . L 5 HOH B 58 1258 60 HOH HOH . L 5 HOH B 59 1259 184 HOH HOH . L 5 HOH B 60 1260 16 HOH HOH . L 5 HOH B 61 1261 34 HOH HOH . L 5 HOH B 62 1262 142 HOH HOH . L 5 HOH B 63 1263 166 HOH HOH . L 5 HOH B 64 1264 77 HOH HOH . L 5 HOH B 65 1265 189 HOH HOH . L 5 HOH B 66 1266 126 HOH HOH . L 5 HOH B 67 1267 67 HOH HOH . L 5 HOH B 68 1268 139 HOH HOH . L 5 HOH B 69 1269 45 HOH HOH . L 5 HOH B 70 1270 151 HOH HOH . L 5 HOH B 71 1271 59 HOH HOH . L 5 HOH B 72 1272 153 HOH HOH . L 5 HOH B 73 1273 114 HOH HOH . L 5 HOH B 74 1274 202 HOH HOH . L 5 HOH B 75 1275 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C14 57N . . . G 4 -18.359 -14.983 9.105 1 41 ? C14 57N 1102 B 1 HETATM 2 C C11 57N . . . G 4 -17.983 -14.708 11.613 1 47.34 ? C11 57N 1102 B 1 HETATM 3 C C10 57N . . . G 4 -18.389 -12.901 13.284 1 50.78 ? C10 57N 1102 B 1 HETATM 4 C C01 57N . . . G 4 -15.177 -18.28 16.603 1 58.91 ? C01 57N 1102 B 1 HETATM 5 C C02 57N . . . G 4 -14.885 -17.527 15.467 1 58.21 ? C02 57N 1102 B 1 HETATM 6 C C03 57N . . . G 4 -15.822 -16.596 14.99 1 56.59 ? C03 57N 1102 B 1 HETATM 7 C C04 57N . . . G 4 -17.034 -16.422 15.64 1 56.98 ? C04 57N 1102 B 1 HETATM 8 C C05 57N . . . G 4 -17.329 -17.18 16.785 1 59.5 ? C05 57N 1102 B 1 HETATM 9 C C06 57N . . . G 4 -16.399 -18.103 17.26 1 59.32 ? C06 57N 1102 B 1 HETATM 10 C C07 57N . . . G 4 -15.786 -15.643 13.78 1 56.51 ? C07 57N 1102 B 1 HETATM 11 O O08 57N . . . G 4 -14.899 -15.524 13.005 1 56.95 ? O08 57N 1102 B 1 HETATM 12 C C09 57N . . . G 4 -17.368 -13.912 12.763 1 50.5 ? C09 57N 1102 B 1 HETATM 13 N N12 57N . . . G 4 -17.782 -14.282 10.239 1 44.51 ? N12 57N 1102 B 1 HETATM 14 O O13 57N . . . G 4 -18.616 -15.677 11.867 1 46.63 ? O13 57N 1102 B 1 HETATM 15 N N15 57N . . . G 4 -18.081 -14.675 7.775 1 40.42 ? N15 57N 1102 B 1 HETATM 16 C C16 57N . . . G 4 -18.838 -15.548 6.866 1 40.26 ? C16 57N 1102 B 1 HETATM 17 C C17 57N . . . G 4 -19.646 -16.447 7.611 1 43.81 ? C17 57N 1102 B 1 HETATM 18 S S18 57N . . . G 4 -19.442 -16.196 9.178 1 45 ? S18 57N 1102 B 1 HETATM 19 C C19 57N . . . G 4 -19.686 -12.915 12.789 1 51.88 ? C19 57N 1102 B 1 HETATM 20 C C20 57N . . . G 4 -20.622 -12 13.247 1 52.25 ? C20 57N 1102 B 1 HETATM 21 C C21 57N . . . G 4 -20.255 -11.066 14.203 1 51.45 ? C21 57N 1102 B 1 HETATM 22 C C22 57N . . . G 4 -18.959 -11.049 14.696 1 49.51 ? C22 57N 1102 B 1 HETATM 23 C C23 57N . . . G 4 -18.026 -11.961 14.237 1 49.88 ? C23 57N 1102 B 1 HETATM 24 C C24 57N . . . G 4 -17.833 -15.342 14.882 1 52.6 ? C24 57N 1102 B 1 HETATM 25 N N25 57N . . . G 4 -17.022 -14.897 13.768 1 51.87 ? N25 57N 1102 B 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 270 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #