data_6Z4Y # _model_server_result.job_id S4i_hXlw2hczgwCwSjjNcw _model_server_result.datetime_utc '2024-11-22 20:14:25' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z4y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":508}' # _entry.id 6Z4Y # _exptl.entry_id 6Z4Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 440.496 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(2-methoxyethoxy)-11-methyl-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6Z4Y _cell.length_a 82.83 _cell.length_b 82.83 _cell.length_c 173.301 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z4Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C22 H28 N6 O4' _chem_comp.formula_weight 440.496 _chem_comp.id Q7Q _chem_comp.mon_nstd_flag . _chem_comp.name 6-(2-methoxyethoxy)-11-methyl-8-oxa-2,11,15,19,21,23-hexazatetracyclo[15.6.1.13,7.020,24]pentacosa-1(23),3(25),4,6,17,20(24),21-heptaen-10-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N3 C18 Q7Q sing 306 n y N3 C19 Q7Q sing 307 n y C18 C17 Q7Q doub 308 n y N4 C19 Q7Q doub 309 n y N4 C20 Q7Q sing 310 n y C19 C22 Q7Q sing 311 n y C17 C22 Q7Q sing 312 n y C17 C16 Q7Q sing 313 n n C20 N5 Q7Q doub 314 n y C22 C21 Q7Q doub 315 n y C16 N2 Q7Q sing 316 n n N5 C21 Q7Q sing 317 n y C21 N6 Q7Q sing 318 n n N2 C15 Q7Q sing 319 n n N6 C7 Q7Q sing 320 n n C15 C14 Q7Q sing 321 n n C14 C13 Q7Q sing 322 n n C7 C6 Q7Q doub 323 n y C7 C8 Q7Q sing 324 n y C6 C5 Q7Q sing 325 n y C8 C9 Q7Q doub 326 n y C13 N1 Q7Q sing 327 n n C5 C4 Q7Q doub 328 n y C9 C4 Q7Q sing 329 n y C9 O3 Q7Q sing 330 n n C4 O2 Q7Q sing 331 n n N1 C12 Q7Q sing 332 n n N1 C11 Q7Q sing 333 n n C10 O3 Q7Q sing 334 n n C10 C11 Q7Q sing 335 n n C11 O4 Q7Q doub 336 n n O2 C3 Q7Q sing 337 n n C3 C2 Q7Q sing 338 n n C2 O1 Q7Q sing 339 n n O1 C1 Q7Q sing 340 n n C5 H1 Q7Q sing 341 n n C6 H2 Q7Q sing 342 n n C8 H3 Q7Q sing 343 n n N2 H4 Q7Q sing 344 n n C10 H6 Q7Q sing 345 n n C10 H7 Q7Q sing 346 n n C12 H8 Q7Q sing 347 n n C12 H9 Q7Q sing 348 n n C12 H10 Q7Q sing 349 n n N3 H11 Q7Q sing 350 n n C13 H12 Q7Q sing 351 n n C13 H13 Q7Q sing 352 n n C14 H14 Q7Q sing 353 n n C14 H15 Q7Q sing 354 n n C15 H16 Q7Q sing 355 n n C15 H17 Q7Q sing 356 n n C1 H18 Q7Q sing 357 n n C1 H19 Q7Q sing 358 n n C1 H20 Q7Q sing 359 n n C2 H21 Q7Q sing 360 n n C2 H22 Q7Q sing 361 n n C3 H23 Q7Q sing 362 n n C3 H24 Q7Q sing 363 n n C16 H25 Q7Q sing 364 n n C16 H26 Q7Q sing 365 n n C18 H27 Q7Q sing 366 n n C20 H28 Q7Q sing 367 n n N6 H29 Q7Q sing 368 n n # _atom_sites.entry_id 6Z4Y _atom_sites.fract_transf_matrix[1][1] 0.012073 _atom_sites.fract_transf_matrix[1][2] 0.00697 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013941 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00577 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CIT A 1 501 1 CIT CIT . C 2 CIT A 1 502 2 CIT CIT . D 3 EDO A 1 503 5 EDO EDO . E 3 EDO A 1 504 6 EDO EDO . F 3 EDO A 1 505 7 EDO EDO . G 3 EDO A 1 506 8 EDO EDO . H 3 EDO A 1 507 9 EDO EDO . I 4 Q7Q A 1 508 1 Q7Q XXX . J 5 HOH A 1 601 28 HOH HOH . J 5 HOH A 2 602 1 HOH HOH . J 5 HOH A 3 603 112 HOH HOH . J 5 HOH A 4 604 140 HOH HOH . J 5 HOH A 5 605 11 HOH HOH . J 5 HOH A 6 606 13 HOH HOH . J 5 HOH A 7 607 9 HOH HOH . J 5 HOH A 8 608 33 HOH HOH . J 5 HOH A 9 609 17 HOH HOH . J 5 HOH A 10 610 79 HOH HOH . J 5 HOH A 11 611 71 HOH HOH . J 5 HOH A 12 612 94 HOH HOH . J 5 HOH A 13 613 107 HOH HOH . J 5 HOH A 14 614 19 HOH HOH . J 5 HOH A 15 615 68 HOH HOH . J 5 HOH A 16 616 78 HOH HOH . J 5 HOH A 17 617 58 HOH HOH . J 5 HOH A 18 618 32 HOH HOH . J 5 HOH A 19 619 113 HOH HOH . J 5 HOH A 20 620 109 HOH HOH . J 5 HOH A 21 621 27 HOH HOH . J 5 HOH A 22 622 91 HOH HOH . J 5 HOH A 23 623 43 HOH HOH . J 5 HOH A 24 624 117 HOH HOH . J 5 HOH A 25 625 20 HOH HOH . J 5 HOH A 26 626 80 HOH HOH . J 5 HOH A 27 627 31 HOH HOH . J 5 HOH A 28 628 6 HOH HOH . J 5 HOH A 29 629 118 HOH HOH . J 5 HOH A 30 630 24 HOH HOH . J 5 HOH A 31 631 23 HOH HOH . J 5 HOH A 32 632 14 HOH HOH . J 5 HOH A 33 633 82 HOH HOH . J 5 HOH A 34 634 138 HOH HOH . J 5 HOH A 35 635 29 HOH HOH . J 5 HOH A 36 636 133 HOH HOH . J 5 HOH A 37 637 36 HOH HOH . J 5 HOH A 38 638 41 HOH HOH . J 5 HOH A 39 639 108 HOH HOH . J 5 HOH A 40 640 99 HOH HOH . J 5 HOH A 41 641 73 HOH HOH . J 5 HOH A 42 642 38 HOH HOH . J 5 HOH A 43 643 46 HOH HOH . J 5 HOH A 44 644 123 HOH HOH . J 5 HOH A 45 645 127 HOH HOH . J 5 HOH A 46 646 8 HOH HOH . J 5 HOH A 47 647 4 HOH HOH . J 5 HOH A 48 648 15 HOH HOH . J 5 HOH A 49 649 75 HOH HOH . J 5 HOH A 50 650 22 HOH HOH . J 5 HOH A 51 651 92 HOH HOH . J 5 HOH A 52 652 139 HOH HOH . J 5 HOH A 53 653 49 HOH HOH . J 5 HOH A 54 654 59 HOH HOH . J 5 HOH A 55 655 104 HOH HOH . J 5 HOH A 56 656 42 HOH HOH . J 5 HOH A 57 657 137 HOH HOH . J 5 HOH A 58 658 119 HOH HOH . J 5 HOH A 59 659 37 HOH HOH . J 5 HOH A 60 660 18 HOH HOH . J 5 HOH A 61 661 3 HOH HOH . J 5 HOH A 62 662 93 HOH HOH . J 5 HOH A 63 663 12 HOH HOH . J 5 HOH A 64 664 102 HOH HOH . J 5 HOH A 65 665 30 HOH HOH . J 5 HOH A 66 666 132 HOH HOH . J 5 HOH A 67 667 89 HOH HOH . J 5 HOH A 68 668 26 HOH HOH . J 5 HOH A 69 669 63 HOH HOH . J 5 HOH A 70 670 70 HOH HOH . J 5 HOH A 71 671 111 HOH HOH . J 5 HOH A 72 672 76 HOH HOH . J 5 HOH A 73 673 116 HOH HOH . J 5 HOH A 74 674 125 HOH HOH . J 5 HOH A 75 675 50 HOH HOH . J 5 HOH A 76 676 48 HOH HOH . J 5 HOH A 77 677 47 HOH HOH . J 5 HOH A 78 678 129 HOH HOH . J 5 HOH A 79 679 72 HOH HOH . J 5 HOH A 80 680 98 HOH HOH . J 5 HOH A 81 681 120 HOH HOH . J 5 HOH A 82 682 115 HOH HOH . J 5 HOH A 83 683 74 HOH HOH . J 5 HOH A 84 684 122 HOH HOH . J 5 HOH A 85 685 57 HOH HOH . J 5 HOH A 86 686 136 HOH HOH . J 5 HOH A 87 687 69 HOH HOH . J 5 HOH A 88 688 77 HOH HOH . J 5 HOH A 89 689 135 HOH HOH . J 5 HOH A 90 690 130 HOH HOH . J 5 HOH A 91 691 121 HOH HOH . J 5 HOH A 92 692 131 HOH HOH . J 5 HOH A 93 693 126 HOH HOH . J 5 HOH A 94 694 10 HOH HOH . J 5 HOH A 95 695 53 HOH HOH . J 5 HOH A 96 696 16 HOH HOH . J 5 HOH A 97 697 100 HOH HOH . J 5 HOH A 98 698 62 HOH HOH . J 5 HOH A 99 699 56 HOH HOH . J 5 HOH A 100 700 85 HOH HOH . J 5 HOH A 101 701 114 HOH HOH . J 5 HOH A 102 702 65 HOH HOH . J 5 HOH A 103 703 66 HOH HOH . J 5 HOH A 104 704 35 HOH HOH . J 5 HOH A 105 705 101 HOH HOH . J 5 HOH A 106 706 96 HOH HOH . J 5 HOH A 107 707 51 HOH HOH . J 5 HOH A 108 708 67 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O3 Q7Q . . . I 4 8.755 26.959 5.56 1 41 ? O3 Q7Q 508 A 1 HETATM 2 C C4 Q7Q . . . I 4 7.922 27.126 7.753 1 42.39 ? C4 Q7Q 508 A 1 HETATM 3 C C5 Q7Q . . . I 4 6.994 27.586 8.662 1 41.71 ? C5 Q7Q 508 A 1 HETATM 4 O O4 Q7Q . . . I 4 7.348 25.615 3.798 1 38.51 ? O4 Q7Q 508 A 1 HETATM 5 C C6 Q7Q . . . I 4 5.965 28.407 8.246 1 40.53 ? C6 Q7Q 508 A 1 HETATM 6 N N1 Q7Q . . . I 4 7.119 27.334 2.372 1 38.97 ? N1 Q7Q 508 A 1 HETATM 7 C C7 Q7Q . . . I 4 5.855 28.783 6.911 1 38.35 ? C7 Q7Q 508 A 1 HETATM 8 C C8 Q7Q . . . I 4 6.794 28.347 5.992 1 37.42 ? C8 Q7Q 508 A 1 HETATM 9 N N2 Q7Q . . . I 4 4.609 30.359 3.897 1 40.69 ? N2 Q7Q 508 A 1 HETATM 10 C C9 Q7Q . . . I 4 7.82 27.506 6.399 1 42.3 ? C9 Q7Q 508 A 1 HETATM 11 C C10 Q7Q . . . I 4 8.808 27.402 4.204 1 37.73 ? C10 Q7Q 508 A 1 HETATM 12 C C11 Q7Q . . . I 4 7.719 26.701 3.411 1 36.81 ? C11 Q7Q 508 A 1 HETATM 13 C C12 Q7Q . . . I 4 6.073 26.699 1.588 1 36.26 ? C12 Q7Q 508 A 1 HETATM 14 N N3 Q7Q . . . I 4 1.923 33.142 6.403 1 33.33 ? N3 Q7Q 508 A 1 HETATM 15 C C13 Q7Q . . . I 4 7.382 28.727 2.015 1 39.32 ? C13 Q7Q 508 A 1 HETATM 16 C C14 Q7Q . . . I 4 6.068 29.512 2.127 1 43.89 ? C14 Q7Q 508 A 1 HETATM 17 C C15 Q7Q . . . I 4 5.93 30.448 3.283 1 42.82 ? C15 Q7Q 508 A 1 HETATM 18 N N4 Q7Q . . . I 4 2.309 32.063 8.531 1 38.99 ? N4 Q7Q 508 A 1 HETATM 19 C C1 Q7Q . . . I 4 10.238 22.244 8.637 1 46.25 ? C1 Q7Q 508 A 1 HETATM 20 O O1 Q7Q . . . I 4 9.357 23.318 8.664 1 45.47 ? O1 Q7Q 508 A 1 HETATM 21 C C2 Q7Q . . . I 4 9.931 24.474 9.278 1 46.1 ? C2 Q7Q 508 A 1 HETATM 22 C C3 Q7Q . . . I 4 8.922 25.607 9.316 1 40.86 ? C3 Q7Q 508 A 1 HETATM 23 O O2 Q7Q . . . I 4 8.968 26.303 8.072 1 40.33 ? O2 Q7Q 508 A 1 HETATM 24 C C16 Q7Q . . . I 4 3.721 31.398 3.796 1 41.05 ? C16 Q7Q 508 A 1 HETATM 25 C C17 Q7Q . . . I 4 3.084 31.811 5.036 1 37.91 ? C17 Q7Q 508 A 1 HETATM 26 C C18 Q7Q . . . I 4 2.291 32.915 5.113 1 38.13 ? C18 Q7Q 508 A 1 HETATM 27 C C19 Q7Q . . . I 4 2.45 32.171 7.201 1 35.74 ? C19 Q7Q 508 A 1 HETATM 28 C C20 Q7Q . . . I 4 2.982 31.048 9.058 1 39.86 ? C20 Q7Q 508 A 1 HETATM 29 N N5 Q7Q . . . I 4 3.782 30.179 8.448 1 41.31 ? N5 Q7Q 508 A 1 HETATM 30 C C21 Q7Q . . . I 4 3.896 30.322 7.125 1 35.61 ? C21 Q7Q 508 A 1 HETATM 31 N N6 Q7Q . . . I 4 4.726 29.479 6.458 1 36.24 ? N6 Q7Q 508 A 1 HETATM 32 C C22 Q7Q . . . I 4 3.209 31.324 6.388 1 38.29 ? C22 Q7Q 508 A 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 32 #