data_6Z5Z # _model_server_result.job_id f9GXgsUraGL4ilVbs8Xtwg _model_server_result.datetime_utc '2024-11-14 23:30:02' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z5z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":103}' # _entry.id 6Z5Z # _exptl.entry_id 6Z5Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 180.156 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description beta-D-fructopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z5Z _cell.length_a 63.82 _cell.length_b 63.82 _cell.length_c 63.82 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z5Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 198 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 6_555 z+1/2,-x+1/2,-y 0 0 1 -1 0 0 0 -1 0 31.91 31.91 0 3 'crystal symmetry operation' 12_554 -y+1/2,-z,x-1/2 0 -1 0 0 0 -1 1 0 0 31.91 0 -31.91 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # _chem_comp.formula 'C6 H12 O6' _chem_comp.formula_weight 180.156 _chem_comp.id BDF _chem_comp.mon_nstd_flag . _chem_comp.name beta-D-fructopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms beta-D-fructose;D-fructose;fructose # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 BDF sing 70 n n C1 O1 BDF sing 71 n n C1 H11 BDF sing 72 n n C1 H12 BDF sing 73 n n C2 C3 BDF sing 74 n n C2 O2 BDF sing 75 n n C2 O6 BDF sing 76 n n C3 C4 BDF sing 77 n n C3 O3 BDF sing 78 n n C3 H3 BDF sing 79 n n C4 C5 BDF sing 80 n n C4 O4 BDF sing 81 n n C4 H4 BDF sing 82 n n C5 C6 BDF sing 83 n n C5 O5 BDF sing 84 n n C5 H5 BDF sing 85 n n C6 O6 BDF sing 86 n n C6 H61 BDF sing 87 n n C6 H62 BDF sing 88 n n O1 HO1 BDF sing 89 n n O2 HO2 BDF sing 90 n n O3 HO3 BDF sing 91 n n O4 HO4 BDF sing 92 n n O5 HO5 BDF sing 93 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version BDF DFrupb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 BDF b-D-fructopyranose 'COMMON NAME' GMML 1 BDF b-D-Frup 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 BDF Fru 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 6Z5Z _atom_sites.fract_transf_matrix[1][1] 0.015669 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015669 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015669 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EVB A 1 101 203 EVB EVB . C 3 BDF A 1 102 1 BDF BDF . D 3 BDF A 1 103 2 BDF BDF . E 4 HOH A 1 201 84 HOH HOH . E 4 HOH A 2 202 178 HOH HOH . E 4 HOH A 3 203 19 HOH HOH . E 4 HOH A 4 204 6 HOH HOH . E 4 HOH A 5 205 17 HOH HOH . E 4 HOH A 6 206 97 HOH HOH . E 4 HOH A 7 207 8 HOH HOH . E 4 HOH A 8 208 168 HOH HOH . E 4 HOH A 9 209 35 HOH HOH . E 4 HOH A 10 210 81 HOH HOH . E 4 HOH A 11 211 26 HOH HOH . E 4 HOH A 12 212 12 HOH HOH . E 4 HOH A 13 213 3 HOH HOH . E 4 HOH A 14 214 15 HOH HOH . E 4 HOH A 15 215 223 HOH HOH . E 4 HOH A 16 216 92 HOH HOH . E 4 HOH A 17 217 28 HOH HOH . E 4 HOH A 18 218 110 HOH HOH . E 4 HOH A 19 219 44 HOH HOH . E 4 HOH A 20 220 14 HOH HOH . E 4 HOH A 21 221 83 HOH HOH . E 4 HOH A 22 222 103 HOH HOH . E 4 HOH A 23 223 7 HOH HOH . E 4 HOH A 24 224 32 HOH HOH . E 4 HOH A 25 225 22 HOH HOH . E 4 HOH A 26 226 10 HOH HOH . E 4 HOH A 27 227 27 HOH HOH . E 4 HOH A 28 228 40 HOH HOH . E 4 HOH A 29 229 205 HOH HOH . E 4 HOH A 30 230 76 HOH HOH . E 4 HOH A 31 231 23 HOH HOH . E 4 HOH A 32 232 29 HOH HOH . E 4 HOH A 33 233 20 HOH HOH . E 4 HOH A 34 234 73 HOH HOH . E 4 HOH A 35 235 187 HOH HOH . E 4 HOH A 36 236 128 HOH HOH . E 4 HOH A 37 237 188 HOH HOH . E 4 HOH A 38 238 87 HOH HOH . E 4 HOH A 39 239 204 HOH HOH . E 4 HOH A 40 240 43 HOH HOH . E 4 HOH A 41 241 101 HOH HOH . E 4 HOH A 42 242 13 HOH HOH . E 4 HOH A 43 243 50 HOH HOH . E 4 HOH A 44 244 125 HOH HOH . E 4 HOH A 45 245 46 HOH HOH . E 4 HOH A 46 246 9 HOH HOH . E 4 HOH A 47 247 234 HOH HOH . E 4 HOH A 48 248 71 HOH HOH . E 4 HOH A 49 249 18 HOH HOH . E 4 HOH A 50 250 64 HOH HOH . E 4 HOH A 51 251 42 HOH HOH . E 4 HOH A 52 252 30 HOH HOH . E 4 HOH A 53 253 59 HOH HOH . E 4 HOH A 54 254 55 HOH HOH . E 4 HOH A 55 255 181 HOH HOH . E 4 HOH A 56 256 52 HOH HOH . E 4 HOH A 57 257 2 HOH HOH . E 4 HOH A 58 258 63 HOH HOH . E 4 HOH A 59 259 70 HOH HOH . E 4 HOH A 60 260 16 HOH HOH . E 4 HOH A 61 261 25 HOH HOH . E 4 HOH A 62 262 33 HOH HOH . E 4 HOH A 63 263 72 HOH HOH . E 4 HOH A 64 264 99 HOH HOH . E 4 HOH A 65 265 67 HOH HOH . E 4 HOH A 66 266 227 HOH HOH . E 4 HOH A 67 267 80 HOH HOH . E 4 HOH A 68 268 86 HOH HOH . E 4 HOH A 69 269 11 HOH HOH . E 4 HOH A 70 270 1 HOH HOH . E 4 HOH A 71 271 36 HOH HOH . E 4 HOH A 72 272 34 HOH HOH . E 4 HOH A 73 273 88 HOH HOH . E 4 HOH A 74 274 136 HOH HOH . E 4 HOH A 75 275 21 HOH HOH . E 4 HOH A 76 276 56 HOH HOH . E 4 HOH A 77 277 54 HOH HOH . E 4 HOH A 78 278 57 HOH HOH . E 4 HOH A 79 279 75 HOH HOH . E 4 HOH A 80 280 31 HOH HOH . E 4 HOH A 81 281 228 HOH HOH . E 4 HOH A 82 282 229 HOH HOH . E 4 HOH A 83 283 45 HOH HOH . E 4 HOH A 84 284 41 HOH HOH . E 4 HOH A 85 285 62 HOH HOH . E 4 HOH A 86 286 230 HOH HOH . E 4 HOH A 87 287 79 HOH HOH . E 4 HOH A 88 288 94 HOH HOH . E 4 HOH A 89 289 161 HOH HOH . E 4 HOH A 90 290 142 HOH HOH . E 4 HOH A 91 291 114 HOH HOH . E 4 HOH A 92 292 66 HOH HOH . E 4 HOH A 93 293 113 HOH HOH . E 4 HOH A 94 294 78 HOH HOH . E 4 HOH A 95 295 123 HOH HOH . E 4 HOH A 96 296 154 HOH HOH . E 4 HOH A 97 297 235 HOH HOH . E 4 HOH A 98 298 51 HOH HOH . E 4 HOH A 99 299 53 HOH HOH . E 4 HOH A 100 300 49 HOH HOH . E 4 HOH A 101 301 69 HOH HOH . E 4 HOH A 102 302 167 HOH HOH . E 4 HOH A 103 303 106 HOH HOH . E 4 HOH A 104 304 193 HOH HOH . E 4 HOH A 105 305 171 HOH HOH . E 4 HOH A 106 306 68 HOH HOH . E 4 HOH A 107 307 186 HOH HOH . E 4 HOH A 108 308 77 HOH HOH . E 4 HOH A 109 309 237 HOH HOH . E 4 HOH A 110 310 209 HOH HOH . E 4 HOH A 111 311 177 HOH HOH . E 4 HOH A 112 312 232 HOH HOH . E 4 HOH A 113 313 100 HOH HOH . E 4 HOH A 114 314 24 HOH HOH . E 4 HOH A 115 315 48 HOH HOH . E 4 HOH A 116 316 65 HOH HOH . E 4 HOH A 117 317 60 HOH HOH . E 4 HOH A 118 318 39 HOH HOH . E 4 HOH A 119 319 236 HOH HOH . E 4 HOH A 120 320 89 HOH HOH . E 4 HOH A 121 321 38 HOH HOH . E 4 HOH A 122 322 233 HOH HOH . E 4 HOH A 123 323 61 HOH HOH . E 4 HOH A 124 324 191 HOH HOH . E 4 HOH A 125 325 108 HOH HOH . E 4 HOH A 126 326 156 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BDF . . . D 3 -1.862 14.836 -7.671 1 11.51 ? C1 BDF 103 A 1 HETATM 2 C C2 BDF . . . D 3 -1.532 13.761 -8.693 1 11.44 ? C2 BDF 103 A 1 HETATM 3 C C3 BDF . . . D 3 -0.542 12.729 -8.136 1 10.48 ? C3 BDF 103 A 1 HETATM 4 C C4 BDF . . . D 3 -0.127 11.765 -9.244 1 9.7 ? C4 BDF 103 A 1 HETATM 5 C C5 BDF . . . D 3 0.44 12.535 -10.429 1 8.25 ? C5 BDF 103 A 1 HETATM 6 C C6 BDF . . . D 3 -0.571 13.564 -10.885 1 9.66 ? C6 BDF 103 A 1 HETATM 7 O O1 BDF . . . D 3 -2.593 14.295 -6.58 1 18.49 ? O1 BDF 103 A 1 HETATM 8 O O2 BDF . . . D 3 -2.685 13.072 -9.099 1 11.76 ? O2 BDF 103 A 1 HETATM 9 O O3 BDF . . . D 3 -1.115 12.012 -7.043 1 12.62 ? O3 BDF 103 A 1 HETATM 10 O O4 BDF . . . D 3 0.793 10.798 -8.755 1 9.1 ? O4 BDF 103 A 1 HETATM 11 O O5 BDF . . . D 3 1.651 13.228 -10.084 1 8.67 ? O5 BDF 103 A 1 HETATM 12 O O6 BDF . . . D 3 -0.938 14.439 -9.797 1 10.2 ? O6 BDF 103 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 12 #