data_6Z6R # _model_server_result.job_id p3cgapLIiEUE00K0xn0Exg _model_server_result.datetime_utc '2024-11-30 04:11:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z6r # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":804}' # _entry.id 6Z6R # _exptl.entry_id 6Z6R _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 175.139 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-oxalyl-alpha-methylalanine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z6R _cell.length_a 49.852 _cell.length_b 90.59 _cell.length_c 122.361 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z6R _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 6 _struct_asym.id F _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 312 A CYS 641 1_555 A SG CYS 319 A CYS 648 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.897 ? disulf ? disulf2 B SG CYS 16 B CYS 101 1_555 B SG CYS 25 B CYS 110 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc1 A NE2 HIS 350 A HIS 679 1_555 C MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.141 ? metalc ? metalc2 A NE2 HIS 396 A HIS 725 1_555 C MN MN . A MN 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.242 ? metalc ? metalc3 C MN MN . A MN 801 1_555 F O06 UQK . A UQK 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.228 ? metalc ? metalc4 C MN MN . A MN 801 1_555 F O09 UQK . A UQK 804 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.151 ? metalc ? metalc5 C MN MN . A MN 801 1_555 G O HOH . A HOH 904 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.023 ? # _chem_comp.formula 'C6 H9 N O5' _chem_comp.formula_weight 175.139 _chem_comp.id UQK _chem_comp.mon_nstd_flag n _chem_comp.name N-oxalyl-alpha-methylalanine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms '2-(carboxycarbonylamino)-2-methyl-propanoic acid' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O C UQK doub 371 n n C OXT UQK sing 372 n n C CA UQK sing 373 n n C03 CA UQK sing 374 n n CA CB UQK sing 375 n n CA N UQK sing 376 n n N C05 UQK sing 377 n n C05 O06 UQK doub 378 n n C05 C07 UQK sing 379 n n O08 C07 UQK doub 380 n n C07 O09 UQK sing 381 n n CB HB1 UQK sing 382 n n CB HB3 UQK sing 383 n n CB HB2 UQK sing 384 n n C03 H031 UQK sing 385 n n C03 H032 UQK sing 386 n n C03 H033 UQK sing 387 n n N H UQK sing 388 n n O09 H1 UQK sing 389 n n OXT HXT UQK sing 390 n n # _atom_sites.entry_id 6Z6R _atom_sites.fract_transf_matrix[1][1] 0.020059 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011039 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008173 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MN A 1 801 801 MN MN . D 4 BR A 1 802 802 BR BR . E 5 GOL A 1 803 804 GOL GOL . F 6 UQK A 1 804 901 UQK LIG . G 7 HOH A 1 901 15 HOH HOH . G 7 HOH A 2 902 8 HOH HOH . G 7 HOH A 3 903 20 HOH HOH . G 7 HOH A 4 904 112 HOH HOH . G 7 HOH A 5 905 36 HOH HOH . G 7 HOH A 6 906 18 HOH HOH . G 7 HOH A 7 907 14 HOH HOH . G 7 HOH A 8 908 17 HOH HOH . G 7 HOH A 9 909 63 HOH HOH . G 7 HOH A 10 910 16 HOH HOH . G 7 HOH A 11 911 7 HOH HOH . G 7 HOH A 12 912 32 HOH HOH . G 7 HOH A 13 913 37 HOH HOH . G 7 HOH A 14 914 2 HOH HOH . G 7 HOH A 15 915 48 HOH HOH . G 7 HOH A 16 916 52 HOH HOH . G 7 HOH A 17 917 72 HOH HOH . G 7 HOH A 18 918 67 HOH HOH . G 7 HOH A 19 919 33 HOH HOH . G 7 HOH A 20 920 68 HOH HOH . G 7 HOH A 21 921 34 HOH HOH . G 7 HOH A 22 922 13 HOH HOH . G 7 HOH A 23 923 9 HOH HOH . G 7 HOH A 24 924 27 HOH HOH . G 7 HOH A 25 925 66 HOH HOH . G 7 HOH A 26 926 30 HOH HOH . G 7 HOH A 27 927 86 HOH HOH . G 7 HOH A 28 928 64 HOH HOH . G 7 HOH A 29 929 53 HOH HOH . G 7 HOH A 30 930 70 HOH HOH . G 7 HOH A 31 931 51 HOH HOH . G 7 HOH A 32 932 73 HOH HOH . G 7 HOH A 33 933 4 HOH HOH . G 7 HOH A 34 934 6 HOH HOH . G 7 HOH A 35 935 12 HOH HOH . G 7 HOH A 36 936 10 HOH HOH . G 7 HOH A 37 937 40 HOH HOH . G 7 HOH A 38 938 19 HOH HOH . G 7 HOH A 39 939 25 HOH HOH . G 7 HOH A 40 940 5 HOH HOH . G 7 HOH A 41 941 45 HOH HOH . G 7 HOH A 42 942 26 HOH HOH . G 7 HOH A 43 943 101 HOH HOH . G 7 HOH A 44 944 77 HOH HOH . G 7 HOH A 45 945 104 HOH HOH . G 7 HOH A 46 946 65 HOH HOH . G 7 HOH A 47 947 83 HOH HOH . G 7 HOH A 48 948 62 HOH HOH . G 7 HOH A 49 949 47 HOH HOH . G 7 HOH A 50 950 90 HOH HOH . G 7 HOH A 51 951 71 HOH HOH . G 7 HOH A 52 952 80 HOH HOH . G 7 HOH A 53 953 42 HOH HOH . G 7 HOH A 54 954 24 HOH HOH . G 7 HOH A 55 955 87 HOH HOH . G 7 HOH A 56 956 107 HOH HOH . G 7 HOH A 57 957 97 HOH HOH . G 7 HOH A 58 958 23 HOH HOH . G 7 HOH A 59 959 44 HOH HOH . G 7 HOH A 60 960 109 HOH HOH . G 7 HOH A 61 961 96 HOH HOH . G 7 HOH A 62 962 41 HOH HOH . G 7 HOH A 63 963 50 HOH HOH . G 7 HOH A 64 964 35 HOH HOH . G 7 HOH A 65 965 99 HOH HOH . G 7 HOH A 66 966 92 HOH HOH . G 7 HOH A 67 967 108 HOH HOH . G 7 HOH A 68 968 81 HOH HOH . G 7 HOH A 69 969 11 HOH HOH . G 7 HOH A 70 970 75 HOH HOH . G 7 HOH A 71 971 115 HOH HOH . G 7 HOH A 72 972 94 HOH HOH . G 7 HOH A 73 973 59 HOH HOH . G 7 HOH A 74 974 1 HOH HOH . G 7 HOH A 75 975 60 HOH HOH . G 7 HOH A 76 976 69 HOH HOH . G 7 HOH A 77 977 106 HOH HOH . G 7 HOH A 78 978 98 HOH HOH . G 7 HOH A 79 979 111 HOH HOH . G 7 HOH A 80 980 89 HOH HOH . G 7 HOH A 81 981 100 HOH HOH . G 7 HOH A 82 982 85 HOH HOH . G 7 HOH A 83 983 43 HOH HOH . G 7 HOH A 84 984 93 HOH HOH . G 7 HOH A 85 985 3 HOH HOH . G 7 HOH A 86 986 61 HOH HOH . G 7 HOH A 87 987 102 HOH HOH . G 7 HOH A 88 988 28 HOH HOH . G 7 HOH A 89 989 88 HOH HOH . G 7 HOH A 90 990 58 HOH HOH . G 7 HOH A 91 991 55 HOH HOH . G 7 HOH A 92 992 38 HOH HOH . G 7 HOH A 93 993 29 HOH HOH . G 7 HOH A 94 994 49 HOH HOH . G 7 HOH A 95 995 113 HOH HOH . G 7 HOH A 96 996 57 HOH HOH . G 7 HOH A 97 997 78 HOH HOH . G 7 HOH A 98 998 74 HOH HOH . G 7 HOH A 99 999 21 HOH HOH . G 7 HOH A 100 1000 110 HOH HOH . G 7 HOH A 101 1001 91 HOH HOH . G 7 HOH A 102 1002 114 HOH HOH . G 7 HOH A 103 1003 39 HOH HOH . G 7 HOH A 104 1004 54 HOH HOH . G 7 HOH A 105 1005 82 HOH HOH . G 7 HOH A 106 1006 105 HOH HOH . H 7 HOH B 1 201 79 HOH HOH . H 7 HOH B 2 202 31 HOH HOH . H 7 HOH B 3 203 95 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C UQK . . . F 6 58.793 17.774 12.566 1 30.5 ? C UQK 804 A 1 HETATM 2 C CB UQK . . . F 6 60.173 16.648 14.049 1 55.06 ? CB UQK 804 A 1 HETATM 3 C CA UQK . . . F 6 58.745 16.734 13.555 1 51.54 ? CA UQK 804 A 1 HETATM 4 C C03 UQK . . . F 6 58.076 15.735 12.674 1 53 ? C03 UQK 804 A 1 HETATM 5 C C05 UQK . . . F 6 57.951 16.723 15.894 1 54.21 ? C05 UQK 804 A 1 HETATM 6 C C07 UQK . . . F 6 56.888 17.302 16.718 1 67.78 ? C07 UQK 804 A 1 HETATM 7 N N UQK . . . F 6 57.853 17.139 14.551 1 54.96 ? N UQK 804 A 1 HETATM 8 O O06 UQK . . . F 6 58.763 16.025 16.34 1 41.88 ? O06 UQK 804 A 1 HETATM 9 O O08 UQK . . . F 6 55.964 17.96 16.181 1 78.55 ? O08 UQK 804 A 1 HETATM 10 O O09 UQK . . . F 6 56.912 17.214 17.954 1 56.3 -1 O09 UQK 804 A 1 HETATM 11 O OXT UQK . . . F 6 58.362 18.899 12.662 1 24.44 ? OXT UQK 804 A 1 HETATM 12 O O UQK . . . F 6 59.316 17.673 11.478 1 25.92 -1 O UQK 804 A 1 HETATM 13 H HB1 UQK . . . F 6 60.829 17.08 13.304 1 66.17 ? HB1 UQK 804 A 1 HETATM 14 H HB3 UQK . . . F 6 60.442 15.609 14.212 1 66.17 ? HB3 UQK 804 A 1 HETATM 15 H HB2 UQK . . . F 6 60.288 17.202 14.974 1 66.17 ? HB2 UQK 804 A 1 HETATM 16 H H031 UQK . . . F 6 58.771 15.402 11.909 1 63.7 ? H031 UQK 804 A 1 HETATM 17 H H032 UQK . . . F 6 57.213 16.193 12.201 1 63.7 ? H032 UQK 804 A 1 HETATM 18 H H033 UQK . . . F 6 57.753 14.886 13.268 1 63.7 ? H033 UQK 804 A 1 HETATM 19 H H UQK . . . F 6 57.102 17.751 14.297 1 66.04 ? H UQK 804 A 1 # _model_server_stats.io_time_ms 102 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 213 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 19 #