data_6Z70
#
_model_server_result.job_id            0oeyX-uS3K4G7zsCmMAIrQ 
_model_server_result.datetime_utc      '2024-11-21 13:43:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6z70 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"H","auth_seq_id":502}' 
#
_entry.id    6Z70 
#
_exptl.entry_id    6Z70 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              356.54 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6Z70 
_cell.length_a            72.1 
_cell.length_b            116.1 
_cell.length_c            137.6 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6Z70 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
#
_chem_comp.formula           'C21 H40 O4' 
_chem_comp.formula_weight    356.54 
_chem_comp.id                OLC 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     1-Oleoyl-R-glycerol 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C18 C17 OLC sing 224 n n 
C10 C9 OLC doub 225 n n 
C10 C11 OLC sing 226 n n 
C9 C8 OLC sing 227 n n 
C17 C16 OLC sing 228 z n 
C11 C12 OLC sing 229 n n 
C8 C7 OLC sing 230 n n 
C24 C22 OLC sing 231 n n 
C24 O25 OLC sing 232 n n 
C16 C15 OLC sing 233 n n 
C12 C13 OLC sing 234 n n 
C7 C6 OLC sing 235 n n 
C15 C14 OLC sing 236 n n 
C13 C14 OLC sing 237 n n 
C6 C5 OLC sing 238 n n 
C5 C4 OLC sing 239 n n 
C4 C3 OLC sing 240 n n 
C3 C2 OLC sing 241 n n 
C2 C1 OLC sing 242 n n 
C21 C22 OLC sing 243 n n 
C21 O20 OLC sing 244 n n 
C1 O19 OLC doub 245 n n 
C1 O20 OLC sing 246 n n 
C22 O23 OLC sing 247 n n 
C18 H18 OLC sing 248 n n 
C18 H18A OLC sing 249 n n 
C18 H18B OLC sing 250 n n 
C10 H10 OLC sing 251 n n 
C9 H9 OLC sing 252 n n 
C17 H17 OLC sing 253 n n 
C17 H17A OLC sing 254 n n 
C11 H11 OLC sing 255 n n 
C11 H11A OLC sing 256 n n 
C8 H8 OLC sing 257 n n 
C8 H8A OLC sing 258 n n 
C24 H24 OLC sing 259 n n 
C24 H24A OLC sing 260 n n 
C16 H16 OLC sing 261 n n 
C16 H16A OLC sing 262 n n 
C12 H12 OLC sing 263 n n 
C12 H12A OLC sing 264 n n 
C7 H7 OLC sing 265 n n 
C7 H7A OLC sing 266 n n 
C15 H15 OLC sing 267 n n 
C15 H15A OLC sing 268 n n 
C13 H13 OLC sing 269 n n 
C13 H13A OLC sing 270 n n 
C6 H6 OLC sing 271 n n 
C6 H6A OLC sing 272 n n 
C14 H14 OLC sing 273 n n 
C14 H14A OLC sing 274 n n 
C5 H5 OLC sing 275 n n 
C5 H5A OLC sing 276 n n 
C4 H4 OLC sing 277 n n 
C4 H4A OLC sing 278 n n 
C3 H3 OLC sing 279 n n 
C3 H3A OLC sing 280 n n 
C2 H2 OLC sing 281 n n 
C2 H2A OLC sing 282 n n 
C21 H21 OLC sing 283 n n 
C21 H21A OLC sing 284 n n 
C22 H22 OLC sing 285 n n 
O25 HO25 OLC sing 286 n n 
O23 HO23 OLC sing 287 n n 
#
_atom_sites.entry_id                     6Z70 
_atom_sites.fract_transf_matrix[1][1]    0.01387 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008613 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007267 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 OLC A 1 501 505 OLC OLC . 
D 2 OLC A 1 502 507 OLC OLC . 
E 2 OLC A 1 503 513 OLC OLC . 
F 2 OLC A 1 504 515 OLC OLC . 
G 2 OLC B 1 501 512 OLC OLC . 
H 2 OLC B 1 502 516 OLC OLC . 
I 2 OLC B 1 503 517 OLC OLC . 
J 3 HOH A 1 601 1 HOH HOH . 
J 3 HOH A 2 602 3 HOH HOH . 
J 3 HOH A 3 603 2 HOH HOH . 
K 3 HOH B 1 601 5 HOH HOH . 
K 3 HOH B 2 602 6 HOH HOH . 
K 3 HOH B 3 603 4 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C18 OLC . . . H 2 -8.177 -3.18 6.949 1 43.68 ? C18 OLC 502 B 1 
HETATM 2 C C10 OLC . . . H 2 -14.047 -9.559 7.785 1 45.25 ? C10 OLC 502 B 1 
HETATM 3 C C9 OLC . . . H 2 -14.215 -10.104 8.976 1 47.38 ? C9 OLC 502 B 1 
HETATM 4 C C17 OLC . . . H 2 -8.836 -4.506 7.366 1 42.68 ? C17 OLC 502 B 1 
HETATM 5 C C11 OLC . . . H 2 -14.509 -8.153 7.5 1 40.8 ? C11 OLC 502 B 1 
HETATM 6 C C8 OLC . . . H 2 -13.721 -11.537 9.151 1 42.02 ? C8 OLC 502 B 1 
HETATM 7 C C24 OLC . . . H 2 -7.702 -20.569 10.711 1 70.13 ? C24 OLC 502 B 1 
HETATM 8 C C16 OLC . . . H 2 -10.311 -4.264 7.703 1 47.36 ? C16 OLC 502 B 1 
HETATM 9 C C12 OLC . . . H 2 -13.271 -7.258 7.437 1 40.64 ? C12 OLC 502 B 1 
HETATM 10 C C7 OLC . . . H 2 -13.535 -11.902 10.62 1 40.88 ? C7 OLC 502 B 1 
HETATM 11 C C15 OLC . . . H 2 -11.276 -5.386 7.274 1 49.4 ? C15 OLC 502 B 1 
HETATM 12 C C13 OLC . . . H 2 -13.686 -5.97 6.748 1 35.17 ? C13 OLC 502 B 1 
HETATM 13 C C6 OLC . . . H 2 -13.941 -13.369 10.751 1 43.35 ? C6 OLC 502 B 1 
HETATM 14 C C14 OLC . . . H 2 -12.7 -4.839 7.08 1 40.17 ? C14 OLC 502 B 1 
HETATM 15 C C5 OLC . . . H 2 -12.765 -14.276 11.107 1 36.78 ? C5 OLC 502 B 1 
HETATM 16 C C4 OLC . . . H 2 -13.191 -15.658 10.644 1 38.76 ? C4 OLC 502 B 1 
HETATM 17 C C3 OLC . . . H 2 -12.694 -16.754 11.583 1 50.77 ? C3 OLC 502 B 1 
HETATM 18 C C2 OLC . . . H 2 -11.303 -17.234 11.173 1 53.61 ? C2 OLC 502 B 1 
HETATM 19 C C21 OLC . . . H 2 -10.03 -20.78 11.679 1 63.65 ? C21 OLC 502 B 1 
HETATM 20 C C1 OLC . . . H 2 -11.231 -18.734 11.44 1 62.68 ? C1 OLC 502 B 1 
HETATM 21 C C22 OLC . . . H 2 -8.632 -21.387 11.611 1 58.53 ? C22 OLC 502 B 1 
HETATM 22 O O19 OLC . . . H 2 -12.244 -19.35 11.487 1 64.49 ? O19 OLC 502 B 1 
HETATM 23 O O25 OLC . . . H 2 -7.123 -19.519 11.444 1 61.61 ? O25 OLC 502 B 1 
HETATM 24 O O23 OLC . . . H 2 -8.13 -21.396 12.917 1 68.54 ? O23 OLC 502 B 1 
HETATM 25 O O20 OLC . . . H 2 -9.989 -19.373 11.649 1 72.99 ? O20 OLC 502 B 1 
#
_model_server_stats.io_time_ms              69 
_model_server_stats.parse_time_ms           31 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           25 
#