data_6Z7U # _model_server_result.job_id U1Sezw4VmPjY4IAnc1tw3w _model_server_result.datetime_utc '2024-12-01 10:04:59' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z7u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":808}' # _entry.id 6Z7U # _exptl.entry_id 6Z7U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 9 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z7U _cell.length_a 47.373 _cell.length_b 88.697 _cell.length_c 199.891 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z7U _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N ? 2 K N N ? 2 L N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 168 n n C1 C2 EDO sing 169 n n C1 H11 EDO sing 170 n n C1 H12 EDO sing 171 n n O1 HO1 EDO sing 172 n n C2 O2 EDO sing 173 n n C2 H21 EDO sing 174 n n C2 H22 EDO sing 175 n n O2 HO2 EDO sing 176 n n # _atom_sites.entry_id 6Z7U _atom_sites.fract_transf_matrix[1][1] 0.021109 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011274 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005003 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO A 1 801 801 EDO EDO . C 3 ADP A 1 802 1 ADP ADP . D 4 BIT A 1 803 2 BIT BIT . E 2 EDO A 1 804 3 EDO EDO . F 2 EDO A 1 805 4 EDO EDO . G 2 EDO A 1 806 5 EDO EDO . H 2 EDO A 1 807 6 EDO EDO . I 2 EDO A 1 808 7 EDO EDO . J 2 EDO A 1 809 8 EDO EDO . K 2 EDO A 1 810 9 EDO EDO . L 2 EDO A 1 811 10 EDO EDO . M 5 HOH A 1 901 31 HOH HOH . M 5 HOH A 2 902 51 HOH HOH . M 5 HOH A 3 903 41 HOH HOH . M 5 HOH A 4 904 5 HOH HOH . M 5 HOH A 5 905 38 HOH HOH . M 5 HOH A 6 906 3 HOH HOH . M 5 HOH A 7 907 52 HOH HOH . M 5 HOH A 8 908 1 HOH HOH . M 5 HOH A 9 909 21 HOH HOH . M 5 HOH A 10 910 8 HOH HOH . M 5 HOH A 11 911 42 HOH HOH . M 5 HOH A 12 912 40 HOH HOH . M 5 HOH A 13 913 9 HOH HOH . M 5 HOH A 14 914 50 HOH HOH . M 5 HOH A 15 915 37 HOH HOH . M 5 HOH A 16 916 18 HOH HOH . M 5 HOH A 17 917 7 HOH HOH . M 5 HOH A 18 918 43 HOH HOH . M 5 HOH A 19 919 22 HOH HOH . M 5 HOH A 20 920 25 HOH HOH . M 5 HOH A 21 921 26 HOH HOH . M 5 HOH A 22 922 49 HOH HOH . M 5 HOH A 23 923 55 HOH HOH . M 5 HOH A 24 924 36 HOH HOH . M 5 HOH A 25 925 30 HOH HOH . M 5 HOH A 26 926 4 HOH HOH . M 5 HOH A 27 927 48 HOH HOH . M 5 HOH A 28 928 14 HOH HOH . M 5 HOH A 29 929 10 HOH HOH . M 5 HOH A 30 930 44 HOH HOH . M 5 HOH A 31 931 47 HOH HOH . M 5 HOH A 32 932 32 HOH HOH . M 5 HOH A 33 933 20 HOH HOH . M 5 HOH A 34 934 28 HOH HOH . M 5 HOH A 35 935 54 HOH HOH . M 5 HOH A 36 936 59 HOH HOH . M 5 HOH A 37 937 17 HOH HOH . M 5 HOH A 38 938 39 HOH HOH . M 5 HOH A 39 939 46 HOH HOH . M 5 HOH A 40 940 13 HOH HOH . M 5 HOH A 41 941 6 HOH HOH . M 5 HOH A 42 942 57 HOH HOH . M 5 HOH A 43 943 23 HOH HOH . M 5 HOH A 44 944 53 HOH HOH . M 5 HOH A 45 945 58 HOH HOH . M 5 HOH A 46 946 12 HOH HOH . M 5 HOH A 47 947 24 HOH HOH . M 5 HOH A 48 948 29 HOH HOH . M 5 HOH A 49 949 19 HOH HOH . M 5 HOH A 50 950 33 HOH HOH . M 5 HOH A 51 951 45 HOH HOH . M 5 HOH A 52 952 11 HOH HOH . M 5 HOH A 53 953 56 HOH HOH . M 5 HOH A 54 954 34 HOH HOH . M 5 HOH A 55 955 16 HOH HOH . M 5 HOH A 56 956 35 HOH HOH . M 5 HOH A 57 957 27 HOH HOH . M 5 HOH A 58 958 2 HOH HOH . M 5 HOH A 59 959 15 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . I 2 -27.766 37.809 -38.197 1 70.1 ? C1 EDO 808 A 1 HETATM 2 O O1 EDO . . . I 2 -27.85 39.143 -38.708 1 72.12 ? O1 EDO 808 A 1 HETATM 3 C C2 EDO . . . I 2 -27.979 36.831 -39.344 1 61.73 ? C2 EDO 808 A 1 HETATM 4 O O2 EDO . . . I 2 -27.939 35.491 -38.845 1 55.05 ? O2 EDO 808 A 1 HETATM 5 H H11 EDO . . . I 2 -26.788 37.644 -37.74 1 84.12 ? H11 EDO 808 A 1 HETATM 6 H H12 EDO . . . I 2 -28.526 37.655 -37.428 1 84.12 ? H12 EDO 808 A 1 HETATM 7 H HO1 EDO . . . I 2 -27.325 39.735 -38.152 1 86.54 ? HO1 EDO 808 A 1 HETATM 8 H H21 EDO . . . I 2 -28.943 37.021 -39.82 1 74.08 ? H21 EDO 808 A 1 HETATM 9 H H22 EDO . . . I 2 -27.2 36.969 -40.098 1 74.08 ? H22 EDO 808 A 1 HETATM 10 H HO2 EDO . . . I 2 -28.42 34.908 -39.449 1 66.06 ? HO2 EDO 808 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 32 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #