data_6Z8C # _model_server_result.job_id GQtvJc-QyViLIq8xGpew4Q _model_server_result.datetime_utc '2024-11-26 04:41:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z8c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 6Z8C # _exptl.entry_id 6Z8C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z8C _cell.length_a 109.221 _cell.length_b 109.221 _cell.length_c 211.161 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z8C _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6Z8C _atom_sites.fract_transf_matrix[1][1] 0.009156 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004736 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 2 NA A 1 302 302 NA NA . D 2 NA A 1 303 303 NA NA . E 3 2CV A 1 304 501 2CV 2CV . F 4 12P A 1 305 1001 12P 12P . G 3 2CV A 1 306 1201 2CV 2CV . H 5 QBN A 1 307 1301 QBN LIG . I 5 QBN A 1 308 1501 QBN LIG . J 6 HOH A 1 401 35 HOH HOH . J 6 HOH A 2 402 29 HOH HOH . J 6 HOH A 3 403 28 HOH HOH . J 6 HOH A 4 404 3 HOH HOH . J 6 HOH A 5 405 32 HOH HOH . J 6 HOH A 6 406 54 HOH HOH . J 6 HOH A 7 407 24 HOH HOH . J 6 HOH A 8 408 10 HOH HOH . J 6 HOH A 9 409 11 HOH HOH . J 6 HOH A 10 410 57 HOH HOH . J 6 HOH A 11 411 16 HOH HOH . J 6 HOH A 12 412 22 HOH HOH . J 6 HOH A 13 413 58 HOH HOH . J 6 HOH A 14 414 52 HOH HOH . J 6 HOH A 15 415 14 HOH HOH . J 6 HOH A 16 416 5 HOH HOH . J 6 HOH A 17 417 12 HOH HOH . J 6 HOH A 18 418 17 HOH HOH . J 6 HOH A 19 419 7 HOH HOH . J 6 HOH A 20 420 39 HOH HOH . J 6 HOH A 21 421 47 HOH HOH . J 6 HOH A 22 422 50 HOH HOH . J 6 HOH A 23 423 37 HOH HOH . J 6 HOH A 24 424 18 HOH HOH . J 6 HOH A 25 425 53 HOH HOH . J 6 HOH A 26 426 26 HOH HOH . J 6 HOH A 27 427 21 HOH HOH . J 6 HOH A 28 428 4 HOH HOH . J 6 HOH A 29 429 60 HOH HOH . J 6 HOH A 30 430 8 HOH HOH . J 6 HOH A 31 431 46 HOH HOH . J 6 HOH A 32 432 25 HOH HOH . J 6 HOH A 33 433 49 HOH HOH . J 6 HOH A 34 434 27 HOH HOH . J 6 HOH A 35 435 6 HOH HOH . J 6 HOH A 36 436 38 HOH HOH . J 6 HOH A 37 437 15 HOH HOH . J 6 HOH A 38 438 55 HOH HOH . J 6 HOH A 39 439 34 HOH HOH . J 6 HOH A 40 440 33 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x 0 _atom_site.Cartn_y 0 _atom_site.Cartn_z 17.513 _atom_site.occupancy 0.25 _atom_site.B_iso_or_equiv 37.48 _atom_site.pdbx_formal_charge 1 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 301 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #