data_6Z8C # _model_server_result.job_id QNfwmyFRTUEHrgBCraDbKw _model_server_result.datetime_utc '2024-11-08 21:17:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6z8c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":304}' # _entry.id 6Z8C # _exptl.entry_id 6Z8C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 379.489 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description HEGA-10 _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6Z8C _cell.length_a 109.221 _cell.length_b 109.221 _cell.length_c 211.161 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6Z8C _symmetry.cell_setting ? _symmetry.Int_Tables_number 97 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 4 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x,-y,z -1 0 0 0 -1 0 0 0 1 0 0 0 3 'crystal symmetry operation' 3_555 -y,x,z 0 -1 0 1 0 0 0 0 1 0 0 0 4 'crystal symmetry operation' 4_555 y,-x,z 0 1 0 -1 0 0 0 0 1 0 0 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # _chem_comp.formula 'C18 H37 N O7' _chem_comp.formula_weight 379.489 _chem_comp.id 2CV _chem_comp.mon_nstd_flag . _chem_comp.name HEGA-10 _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C9 C12 2CV sing 87 n n C9 C1 2CV sing 88 n n C12 C15 2CV sing 89 n n C15 C18 2CV sing 90 n n C18 C21 2CV sing 91 n n C21 C24 2CV sing 92 n n C24 C27 2CV sing 93 n n C27 C30 2CV sing 94 n n C30 N33 2CV sing 95 n n C30 O34 2CV doub 96 n n N33 C35 2CV sing 97 n n N33 C36 2CV sing 98 n n C35 C60 2CV sing 99 n n C36 C37 2CV sing 100 n n C37 C40 2CV sing 101 n n C37 O47 2CV sing 102 n n C40 C41 2CV sing 103 n n C40 O49 2CV sing 104 n n C41 C42 2CV sing 105 n n C41 O51 2CV sing 106 n n C42 C43 2CV sing 107 n n C42 O53 2CV sing 108 n n C43 O44 2CV sing 109 n n C60 O63 2CV sing 110 n n C1 C0 2CV sing 111 n n C9 H91C 2CV sing 112 n n C9 H92C 2CV sing 113 n n C12 H121 2CV sing 114 n n C12 H122 2CV sing 115 n n C1 H11C 2CV sing 116 n n C1 H12C 2CV sing 117 n n C15 H151 2CV sing 118 n n C15 H152 2CV sing 119 n n C18 H181 2CV sing 120 n n C18 H182 2CV sing 121 n n C21 H211 2CV sing 122 n n C21 H212 2CV sing 123 n n C24 H241 2CV sing 124 n n C24 H242 2CV sing 125 n n C27 H271 2CV sing 126 n n C27 H272 2CV sing 127 n n C35 H351 2CV sing 128 n n C35 H352 2CV sing 129 n n C36 H361 2CV sing 130 n n C36 H362 2CV sing 131 n n C60 H601 2CV sing 132 n n C60 H602 2CV sing 133 n n C37 H37 2CV sing 134 n n C40 H40 2CV sing 135 n n O47 H47 2CV sing 136 n n C41 H41 2CV sing 137 n n O49 H49 2CV sing 138 n n C42 H42 2CV sing 139 n n O51 H51 2CV sing 140 n n C43 H431 2CV sing 141 n n C43 H432 2CV sing 142 n n O53 H53 2CV sing 143 n n O44 H44 2CV sing 144 n n O63 H63 2CV sing 145 n n C0 H01C 2CV sing 146 n n C0 H02C 2CV sing 147 n n C0 H03C 2CV sing 148 n n # _atom_sites.entry_id 6Z8C _atom_sites.fract_transf_matrix[1][1] 0.009156 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009156 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004736 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 301 301 NA NA . C 2 NA A 1 302 302 NA NA . D 2 NA A 1 303 303 NA NA . E 3 2CV A 1 304 501 2CV 2CV . F 4 12P A 1 305 1001 12P 12P . G 3 2CV A 1 306 1201 2CV 2CV . H 5 QBN A 1 307 1301 QBN LIG . I 5 QBN A 1 308 1501 QBN LIG . J 6 HOH A 1 401 35 HOH HOH . J 6 HOH A 2 402 29 HOH HOH . J 6 HOH A 3 403 28 HOH HOH . J 6 HOH A 4 404 3 HOH HOH . J 6 HOH A 5 405 32 HOH HOH . J 6 HOH A 6 406 54 HOH HOH . J 6 HOH A 7 407 24 HOH HOH . J 6 HOH A 8 408 10 HOH HOH . J 6 HOH A 9 409 11 HOH HOH . J 6 HOH A 10 410 57 HOH HOH . J 6 HOH A 11 411 16 HOH HOH . J 6 HOH A 12 412 22 HOH HOH . J 6 HOH A 13 413 58 HOH HOH . J 6 HOH A 14 414 52 HOH HOH . J 6 HOH A 15 415 14 HOH HOH . J 6 HOH A 16 416 5 HOH HOH . J 6 HOH A 17 417 12 HOH HOH . J 6 HOH A 18 418 17 HOH HOH . J 6 HOH A 19 419 7 HOH HOH . J 6 HOH A 20 420 39 HOH HOH . J 6 HOH A 21 421 47 HOH HOH . J 6 HOH A 22 422 50 HOH HOH . J 6 HOH A 23 423 37 HOH HOH . J 6 HOH A 24 424 18 HOH HOH . J 6 HOH A 25 425 53 HOH HOH . J 6 HOH A 26 426 26 HOH HOH . J 6 HOH A 27 427 21 HOH HOH . J 6 HOH A 28 428 4 HOH HOH . J 6 HOH A 29 429 60 HOH HOH . J 6 HOH A 30 430 8 HOH HOH . J 6 HOH A 31 431 46 HOH HOH . J 6 HOH A 32 432 25 HOH HOH . J 6 HOH A 33 433 49 HOH HOH . J 6 HOH A 34 434 27 HOH HOH . J 6 HOH A 35 435 6 HOH HOH . J 6 HOH A 36 436 38 HOH HOH . J 6 HOH A 37 437 15 HOH HOH . J 6 HOH A 38 438 55 HOH HOH . J 6 HOH A 39 439 34 HOH HOH . J 6 HOH A 40 440 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 2CV . . . E 3 -5.317 -17.91 19.495 1 63.45 ? C9 2CV 304 A 1 HETATM 2 C C12 2CV . . . E 3 -5.417 -17.766 17.994 1 64.12 ? C12 2CV 304 A 1 HETATM 3 C C15 2CV . . . E 3 -5.085 -18.993 17.182 1 64.78 ? C15 2CV 304 A 1 HETATM 4 C C18 2CV . . . E 3 -4.909 -18.66 15.738 1 65.99 ? C18 2CV 304 A 1 HETATM 5 C C21 2CV . . . E 3 -5.431 -19.68 14.789 1 67.54 ? C21 2CV 304 A 1 HETATM 6 C C24 2CV . . . E 3 -4.473 -20.799 14.547 1 69.48 ? C24 2CV 304 A 1 HETATM 7 C C27 2CV . . . E 3 -4.708 -21.55 13.235 1 71.62 ? C27 2CV 304 A 1 HETATM 8 C C30 2CV . . . E 3 -3.972 -20.94 12.065 1 73.66 ? C30 2CV 304 A 1 HETATM 9 N N33 2CV . . . E 3 -3.586 -21.757 11.059 1 75.77 ? N33 2CV 304 A 1 HETATM 10 O O34 2CV . . . E 3 -3.712 -19.749 12.058 1 73.59 ? O34 2CV 304 A 1 HETATM 11 C C35 2CV . . . E 3 -3.726 -23.227 11.085 1 75.44 ? C35 2CV 304 A 1 HETATM 12 C C36 2CV . . . E 3 -2.958 -21.228 9.846 1 78.08 ? C36 2CV 304 A 1 HETATM 13 C C37 2CV . . . E 3 -3.285 -19.867 9.231 1 80.16 ? C37 2CV 304 A 1 HETATM 14 C C40 2CV . . . E 3 -4.765 -19.57 8.956 1 80.87 ? C40 2CV 304 A 1 HETATM 15 C C41 2CV . . . E 3 -5.057 -18.136 8.498 1 81.42 ? C41 2CV 304 A 1 HETATM 16 C C42 2CV . . . E 3 -4.676 -17.798 7.051 1 81.71 ? C42 2CV 304 A 1 HETATM 17 C C43 2CV . . . E 3 -5.902 -17.438 6.214 1 81.73 ? C43 2CV 304 A 1 HETATM 18 O O44 2CV . . . E 3 -5.814 -16.12 5.679 1 81.65 ? O44 2CV 304 A 1 HETATM 19 O O47 2CV . . . E 3 -2.494 -19.707 8.047 1 80.95 ? O47 2CV 304 A 1 HETATM 20 O O49 2CV . . . E 3 -5.513 -19.766 10.155 1 80.57 ? O49 2CV 304 A 1 HETATM 21 O O51 2CV . . . E 3 -4.472 -17.211 9.406 1 81.44 ? O51 2CV 304 A 1 HETATM 22 O O53 2CV . . . E 3 -3.94 -18.816 6.365 1 81.77 ? O53 2CV 304 A 1 HETATM 23 C C60 2CV . . . E 3 -4.373 -23.827 9.845 1 75.07 ? C60 2CV 304 A 1 HETATM 24 O O63 2CV . . . E 3 -3.413 -24.362 8.954 1 74.73 ? O63 2CV 304 A 1 HETATM 25 C C1 2CV . . . E 3 -5.793 -16.677 20.223 1 63.21 ? C1 2CV 304 A 1 HETATM 26 C C0 2CV . . . E 3 -5.438 -16.658 21.672 1 63.22 ? C0 2CV 304 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 322 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 26 #