data_6ZAJ # _model_server_result.job_id yp_SO6hs4T-bQekXvV62vQ _model_server_result.datetime_utc '2024-11-24 14:52:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zaj # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":402}' # _entry.id 6ZAJ # _exptl.entry_id 6ZAJ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.43 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZAJ _cell.length_a 41.885 _cell.length_b 75.639 _cell.length_c 101.897 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZAJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 214 A HIS 214 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc2 A OD1 ASP 216 A ASP 216 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc3 A NE2 HIS 270 A HIS 270 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.181 ? metalc ? metalc4 C S17 ACV . A ACV 402 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.416 ? metalc ? metalc5 D O2 OXY . A OXY 403 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? metalc ? metalc6 E FE FE2 . A FE2 404 1_555 F O HOH . A HOH 540 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? # _chem_comp.formula 'C14 H25 N3 O6 S' _chem_comp.formula_weight 363.43 _chem_comp.id ACV _chem_comp.mon_nstd_flag . _chem_comp.name L-D-(A-AMINOADIPOYL)-L-CYSTEINYL-D-VALINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 ACV sing 1 n n C1 O19 ACV sing 2 n n C1 O20 ACV doub 3 n n C2 C3 ACV sing 4 n n C2 N14 ACV sing 5 n n C2 H2 ACV sing 6 n n C3 C4 ACV sing 7 n n C3 H31 ACV sing 8 n n C3 H32A ACV sing 9 n n C4 C7 ACV sing 10 n n C4 H41 ACV sing 11 n n C4 H42 ACV sing 12 n n C7 C10 ACV sing 13 n n C7 H71 ACV sing 14 n n C7 H72 ACV sing 15 n n C10 N11 ACV sing 16 n n C10 O15 ACV doub 17 n n N11 C12 ACV sing 18 n n N11 HNB ACV sing 19 n n C12 C13 ACV sing 20 n n C12 C16 ACV sing 21 n n C12 H12 ACV sing 22 n n C13 O18 ACV doub 23 n n C13 N29 ACV sing 24 n n N14 HNE1 ACV sing 25 n n N14 HNE2 ACV sing 26 n n C16 S17 ACV sing 27 n n C16 H161 ACV sing 28 n n C16 H162 ACV sing 29 n n S17 HS7 ACV sing 30 n n O19 HOJ ACV sing 31 n n N29 C30 ACV sing 32 n n N29 HNT ACV sing 33 n n C30 C31 ACV sing 34 n n C30 C32 ACV sing 35 n n C30 H30 ACV sing 36 n n C31 O42 ACV doub 37 n n C31 O43 ACV sing 38 n n C32 C33 ACV sing 39 n n C32 C37 ACV sing 40 n n C32 H32 ACV sing 41 n n C33 H331 ACV sing 42 n n C33 H332 ACV sing 43 n n C33 H333 ACV sing 44 n n C37 H371 ACV sing 45 n n C37 H372 ACV sing 46 n n C37 H373 ACV sing 47 n n O43 HO ACV sing 48 n n # _atom_sites.entry_id 6ZAJ _atom_sites.fract_transf_matrix[1][1] 0.023875 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013221 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009814 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 2 SO4 SO4 . C 3 ACV A 1 402 1 ACV ACV . D 4 OXY A 1 403 1 OXY OXY . E 5 FE2 A 1 404 1 FE2 FE . F 6 HOH A 1 501 71 HOH HOH . F 6 HOH A 2 502 66 HOH HOH . F 6 HOH A 3 503 39 HOH HOH . F 6 HOH A 4 504 3 HOH HOH . F 6 HOH A 5 505 75 HOH HOH . F 6 HOH A 6 506 139 HOH HOH . F 6 HOH A 7 507 180 HOH HOH . F 6 HOH A 8 508 153 HOH HOH . F 6 HOH A 9 509 49 HOH HOH . F 6 HOH A 10 510 152 HOH HOH . F 6 HOH A 11 511 14 HOH HOH . F 6 HOH A 12 512 149 HOH HOH . F 6 HOH A 13 513 10 HOH HOH . F 6 HOH A 14 514 28 HOH HOH . F 6 HOH A 15 515 17 HOH HOH . F 6 HOH A 16 516 46 HOH HOH . F 6 HOH A 17 517 83 HOH HOH . F 6 HOH A 18 518 26 HOH HOH . F 6 HOH A 19 519 79 HOH HOH . F 6 HOH A 20 520 78 HOH HOH . F 6 HOH A 21 521 132 HOH HOH . F 6 HOH A 22 522 69 HOH HOH . F 6 HOH A 23 523 7 HOH HOH . F 6 HOH A 24 524 68 HOH HOH . F 6 HOH A 25 525 115 HOH HOH . F 6 HOH A 26 526 12 HOH HOH . F 6 HOH A 27 527 44 HOH HOH . F 6 HOH A 28 528 22 HOH HOH . F 6 HOH A 29 529 150 HOH HOH . F 6 HOH A 30 530 54 HOH HOH . F 6 HOH A 31 531 135 HOH HOH . F 6 HOH A 32 532 84 HOH HOH . F 6 HOH A 33 533 57 HOH HOH . F 6 HOH A 34 534 29 HOH HOH . F 6 HOH A 35 535 30 HOH HOH . F 6 HOH A 36 536 116 HOH HOH . F 6 HOH A 37 537 33 HOH HOH . F 6 HOH A 38 538 48 HOH HOH . F 6 HOH A 39 539 94 HOH HOH . F 6 HOH A 40 540 5 HOH HOH . F 6 HOH A 41 541 55 HOH HOH . F 6 HOH A 42 542 177 HOH HOH . F 6 HOH A 43 543 31 HOH HOH . F 6 HOH A 44 544 18 HOH HOH . F 6 HOH A 45 545 21 HOH HOH . F 6 HOH A 46 546 124 HOH HOH . F 6 HOH A 47 547 73 HOH HOH . F 6 HOH A 48 548 85 HOH HOH . F 6 HOH A 49 549 50 HOH HOH . F 6 HOH A 50 550 187 HOH HOH . F 6 HOH A 51 551 9 HOH HOH . F 6 HOH A 52 552 51 HOH HOH . F 6 HOH A 53 553 74 HOH HOH . F 6 HOH A 54 554 60 HOH HOH . F 6 HOH A 55 555 20 HOH HOH . F 6 HOH A 56 556 101 HOH HOH . F 6 HOH A 57 557 11 HOH HOH . F 6 HOH A 58 558 67 HOH HOH . F 6 HOH A 59 559 91 HOH HOH . F 6 HOH A 60 560 161 HOH HOH . F 6 HOH A 61 561 63 HOH HOH . F 6 HOH A 62 562 178 HOH HOH . F 6 HOH A 63 563 6 HOH HOH . F 6 HOH A 64 564 2 HOH HOH . F 6 HOH A 65 565 8 HOH HOH . F 6 HOH A 66 566 110 HOH HOH . F 6 HOH A 67 567 34 HOH HOH . F 6 HOH A 68 568 96 HOH HOH . F 6 HOH A 69 569 15 HOH HOH . F 6 HOH A 70 570 136 HOH HOH . F 6 HOH A 71 571 4 HOH HOH . F 6 HOH A 72 572 173 HOH HOH . F 6 HOH A 73 573 32 HOH HOH . F 6 HOH A 74 574 43 HOH HOH . F 6 HOH A 75 575 59 HOH HOH . F 6 HOH A 76 576 176 HOH HOH . F 6 HOH A 77 577 99 HOH HOH . F 6 HOH A 78 578 61 HOH HOH . F 6 HOH A 79 579 138 HOH HOH . F 6 HOH A 80 580 111 HOH HOH . F 6 HOH A 81 581 52 HOH HOH . F 6 HOH A 82 582 65 HOH HOH . F 6 HOH A 83 583 108 HOH HOH . F 6 HOH A 84 584 92 HOH HOH . F 6 HOH A 85 585 35 HOH HOH . F 6 HOH A 86 586 45 HOH HOH . F 6 HOH A 87 587 72 HOH HOH . F 6 HOH A 88 588 118 HOH HOH . F 6 HOH A 89 589 27 HOH HOH . F 6 HOH A 90 590 188 HOH HOH . F 6 HOH A 91 591 16 HOH HOH . F 6 HOH A 92 592 56 HOH HOH . F 6 HOH A 93 593 89 HOH HOH . F 6 HOH A 94 594 76 HOH HOH . F 6 HOH A 95 595 125 HOH HOH . F 6 HOH A 96 596 93 HOH HOH . F 6 HOH A 97 597 24 HOH HOH . F 6 HOH A 98 598 23 HOH HOH . F 6 HOH A 99 599 169 HOH HOH . F 6 HOH A 100 600 114 HOH HOH . F 6 HOH A 101 601 117 HOH HOH . F 6 HOH A 102 602 70 HOH HOH . F 6 HOH A 103 603 47 HOH HOH . F 6 HOH A 104 604 133 HOH HOH . F 6 HOH A 105 605 113 HOH HOH . F 6 HOH A 106 606 41 HOH HOH . F 6 HOH A 107 607 156 HOH HOH . F 6 HOH A 108 608 102 HOH HOH . F 6 HOH A 109 609 121 HOH HOH . F 6 HOH A 110 610 159 HOH HOH . F 6 HOH A 111 611 38 HOH HOH . F 6 HOH A 112 612 120 HOH HOH . F 6 HOH A 113 613 1 HOH HOH . F 6 HOH A 114 614 100 HOH HOH . F 6 HOH A 115 615 36 HOH HOH . F 6 HOH A 116 616 97 HOH HOH . F 6 HOH A 117 617 103 HOH HOH . F 6 HOH A 118 618 62 HOH HOH . F 6 HOH A 119 619 19 HOH HOH . F 6 HOH A 120 620 80 HOH HOH . F 6 HOH A 121 621 87 HOH HOH . F 6 HOH A 122 622 13 HOH HOH . F 6 HOH A 123 623 58 HOH HOH . F 6 HOH A 124 624 157 HOH HOH . F 6 HOH A 125 625 164 HOH HOH . F 6 HOH A 126 626 137 HOH HOH . F 6 HOH A 127 627 181 HOH HOH . F 6 HOH A 128 628 25 HOH HOH . F 6 HOH A 129 629 122 HOH HOH . F 6 HOH A 130 630 140 HOH HOH . F 6 HOH A 131 631 147 HOH HOH . F 6 HOH A 132 632 119 HOH HOH . F 6 HOH A 133 633 142 HOH HOH . F 6 HOH A 134 634 82 HOH HOH . F 6 HOH A 135 635 186 HOH HOH . F 6 HOH A 136 636 86 HOH HOH . F 6 HOH A 137 637 98 HOH HOH . F 6 HOH A 138 638 146 HOH HOH . F 6 HOH A 139 639 128 HOH HOH . F 6 HOH A 140 640 64 HOH HOH . F 6 HOH A 141 641 182 HOH HOH . F 6 HOH A 142 642 172 HOH HOH . F 6 HOH A 143 643 154 HOH HOH . F 6 HOH A 144 644 53 HOH HOH . F 6 HOH A 145 645 40 HOH HOH . F 6 HOH A 146 646 106 HOH HOH . F 6 HOH A 147 647 42 HOH HOH . F 6 HOH A 148 648 112 HOH HOH . F 6 HOH A 149 649 81 HOH HOH . F 6 HOH A 150 650 37 HOH HOH . F 6 HOH A 151 651 109 HOH HOH . F 6 HOH A 152 652 175 HOH HOH . F 6 HOH A 153 653 174 HOH HOH . F 6 HOH A 154 654 105 HOH HOH . F 6 HOH A 155 655 189 HOH HOH . F 6 HOH A 156 656 90 HOH HOH . F 6 HOH A 157 657 127 HOH HOH . F 6 HOH A 158 658 107 HOH HOH . F 6 HOH A 159 659 95 HOH HOH . F 6 HOH A 160 660 185 HOH HOH . F 6 HOH A 161 661 131 HOH HOH . F 6 HOH A 162 662 88 HOH HOH . F 6 HOH A 163 663 77 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 ACV . . . C 3 -6.223 3.787 -8.525 1 34.65 ? C1 ACV 402 A 1 HETATM 2 C C2 ACV . . . C 3 -7.088 2.589 -8.86 1 36.89 ? C2 ACV 402 A 1 HETATM 3 C C3 ACV . . . C 3 -6.479 1.347 -8.201 1 39.36 ? C3 ACV 402 A 1 HETATM 4 C C4 ACV . . . C 3 -7.168 0.086 -8.694 1 41.67 ? C4 ACV 402 A 1 HETATM 5 C C7 ACV . . . C 3 -6.467 -1.178 -8.225 1 44.82 ? C7 ACV 402 A 1 HETATM 6 C C10 ACV . . . C 3 -7.183 -2.428 -8.669 1 47.68 ? C10 ACV 402 A 1 HETATM 7 N N11 ACV . . . C 3 -7.983 -2.981 -7.753 1 48.6 ? N11 ACV 402 A 1 HETATM 8 C C12 ACV . . . C 3 -8.641 -4.267 -7.903 1 46.81 ? C12 ACV 402 A 1 HETATM 9 C C13 ACV . . . C 3 -10.124 -4.067 -7.6 1 46.95 ? C13 ACV 402 A 1 HETATM 10 N N14 ACV . . . C 3 -7.22 2.458 -10.321 1 37.02 ? N14 ACV 402 A 1 HETATM 11 O O15 ACV . . . C 3 -7.033 -2.895 -9.795 1 47.85 ? O15 ACV 402 A 1 HETATM 12 C C16 ACV . . . C 3 -8.15 -5.21 -6.821 1 41.69 ? C16 ACV 402 A 1 HETATM 13 S S17 ACV . . . C 3 -8.427 -4.553 -5.157 1 38.63 ? S17 ACV 402 A 1 HETATM 14 O O18 ACV . . . C 3 -10.555 -2.949 -7.341 1 45.46 ? O18 ACV 402 A 1 HETATM 15 O O19 ACV . . . C 3 -6.303 4.148 -7.283 1 33.01 ? O19 ACV 402 A 1 HETATM 16 O O20 ACV . . . C 3 -5.519 4.317 -9.343 1 33.93 ? O20 ACV 402 A 1 HETATM 17 N N29 ACV . . . C 3 -10.89 -5.161 -7.571 1 50.53 ? N29 ACV 402 A 1 HETATM 18 C C30 ACV . . . C 3 -12.284 -5.071 -7.175 1 54.46 ? C30 ACV 402 A 1 HETATM 19 C C31 ACV . . . C 3 -13.118 -6.058 -7.974 1 56.84 ? C31 ACV 402 A 1 HETATM 20 O O42 ACV . . . C 3 -12.476 -6.567 -9.008 1 59.11 ? O42 ACV 402 A 1 HETATM 21 O O43 ACV . . . C 3 -14.266 -6.333 -7.669 1 57.95 ? O43 ACV 402 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 25 _model_server_stats.query_time_ms 527 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 21 #