data_6ZAL # _model_server_result.job_id lGX7ZxdSP0vyi-84DrObNg _model_server_result.datetime_utc '2024-11-13 11:40:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zal # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6ZAL # _exptl.entry_id 6ZAL _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 31.999 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXYGEN MOLECULE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZAL _cell.length_a 41.922 _cell.length_b 75.529 _cell.length_c 102.137 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZAL _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 214 A HIS 214 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? metalc ? metalc2 A OD1 ASP 216 A ASP 216 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.067 ? metalc ? metalc3 A NE2 HIS 270 A HIS 270 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.25 ? metalc ? metalc4 C S17 ACV . A ACV 402 1_555 E FE FE2 . A FE2 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc5 D O1 OXY . A OXY 403 1_555 E FE FE2 . A FE2 404 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.979 ? metalc ? metalc6 E FE FE2 . A FE2 404 1_555 F O HOH . A HOH 534 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.226 ? # _chem_comp.formula O2 _chem_comp.formula_weight 31.999 _chem_comp.id OXY _chem_comp.mon_nstd_flag . _chem_comp.name 'OXYGEN MOLECULE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 O1 _chem_comp_bond.atom_id_2 O2 _chem_comp_bond.comp_id OXY _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 285 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 6ZAL _atom_sites.fract_transf_matrix[1][1] 0.023854 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01324 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009791 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 401 2 SO4 SO4 . C 3 ACV A 1 402 1 ACV ACV . D 4 OXY A 1 403 1 OXY OXY . E 5 FE2 A 1 404 1 FE2 FE . F 6 HOH A 1 501 86 HOH HOH . F 6 HOH A 2 502 63 HOH HOH . F 6 HOH A 3 503 163 HOH HOH . F 6 HOH A 4 504 105 HOH HOH . F 6 HOH A 5 505 35 HOH HOH . F 6 HOH A 6 506 5 HOH HOH . F 6 HOH A 7 507 37 HOH HOH . F 6 HOH A 8 508 20 HOH HOH . F 6 HOH A 9 509 10 HOH HOH . F 6 HOH A 10 510 148 HOH HOH . F 6 HOH A 11 511 103 HOH HOH . F 6 HOH A 12 512 49 HOH HOH . F 6 HOH A 13 513 11 HOH HOH . F 6 HOH A 14 514 80 HOH HOH . F 6 HOH A 15 515 97 HOH HOH . F 6 HOH A 16 516 72 HOH HOH . F 6 HOH A 17 517 100 HOH HOH . F 6 HOH A 18 518 77 HOH HOH . F 6 HOH A 19 519 16 HOH HOH . F 6 HOH A 20 520 59 HOH HOH . F 6 HOH A 21 521 32 HOH HOH . F 6 HOH A 22 522 21 HOH HOH . F 6 HOH A 23 523 40 HOH HOH . F 6 HOH A 24 524 88 HOH HOH . F 6 HOH A 25 525 8 HOH HOH . F 6 HOH A 26 526 138 HOH HOH . F 6 HOH A 27 527 133 HOH HOH . F 6 HOH A 28 528 85 HOH HOH . F 6 HOH A 29 529 28 HOH HOH . F 6 HOH A 30 530 19 HOH HOH . F 6 HOH A 31 531 56 HOH HOH . F 6 HOH A 32 532 14 HOH HOH . F 6 HOH A 33 533 96 HOH HOH . F 6 HOH A 34 534 1 HOH HOH . F 6 HOH A 35 535 60 HOH HOH . F 6 HOH A 36 536 98 HOH HOH . F 6 HOH A 37 537 132 HOH HOH . F 6 HOH A 38 538 68 HOH HOH . F 6 HOH A 39 539 64 HOH HOH . F 6 HOH A 40 540 76 HOH HOH . F 6 HOH A 41 541 29 HOH HOH . F 6 HOH A 42 542 34 HOH HOH . F 6 HOH A 43 543 43 HOH HOH . F 6 HOH A 44 544 7 HOH HOH . F 6 HOH A 45 545 18 HOH HOH . F 6 HOH A 46 546 58 HOH HOH . F 6 HOH A 47 547 53 HOH HOH . F 6 HOH A 48 548 52 HOH HOH . F 6 HOH A 49 549 99 HOH HOH . F 6 HOH A 50 550 78 HOH HOH . F 6 HOH A 51 551 17 HOH HOH . F 6 HOH A 52 552 109 HOH HOH . F 6 HOH A 53 553 47 HOH HOH . F 6 HOH A 54 554 74 HOH HOH . F 6 HOH A 55 555 3 HOH HOH . F 6 HOH A 56 556 23 HOH HOH . F 6 HOH A 57 557 9 HOH HOH . F 6 HOH A 58 558 143 HOH HOH . F 6 HOH A 59 559 155 HOH HOH . F 6 HOH A 60 560 4 HOH HOH . F 6 HOH A 61 561 12 HOH HOH . F 6 HOH A 62 562 130 HOH HOH . F 6 HOH A 63 563 26 HOH HOH . F 6 HOH A 64 564 67 HOH HOH . F 6 HOH A 65 565 127 HOH HOH . F 6 HOH A 66 566 41 HOH HOH . F 6 HOH A 67 567 13 HOH HOH . F 6 HOH A 68 568 81 HOH HOH . F 6 HOH A 69 569 51 HOH HOH . F 6 HOH A 70 570 120 HOH HOH . F 6 HOH A 71 571 134 HOH HOH . F 6 HOH A 72 572 91 HOH HOH . F 6 HOH A 73 573 2 HOH HOH . F 6 HOH A 74 574 50 HOH HOH . F 6 HOH A 75 575 55 HOH HOH . F 6 HOH A 76 576 117 HOH HOH . F 6 HOH A 77 577 102 HOH HOH . F 6 HOH A 78 578 122 HOH HOH . F 6 HOH A 79 579 31 HOH HOH . F 6 HOH A 80 580 126 HOH HOH . F 6 HOH A 81 581 111 HOH HOH . F 6 HOH A 82 582 90 HOH HOH . F 6 HOH A 83 583 152 HOH HOH . F 6 HOH A 84 584 112 HOH HOH . F 6 HOH A 85 585 70 HOH HOH . F 6 HOH A 86 586 144 HOH HOH . F 6 HOH A 87 587 24 HOH HOH . F 6 HOH A 88 588 137 HOH HOH . F 6 HOH A 89 589 115 HOH HOH . F 6 HOH A 90 590 44 HOH HOH . F 6 HOH A 91 591 42 HOH HOH . F 6 HOH A 92 592 62 HOH HOH . F 6 HOH A 93 593 79 HOH HOH . F 6 HOH A 94 594 39 HOH HOH . F 6 HOH A 95 595 6 HOH HOH . F 6 HOH A 96 596 45 HOH HOH . F 6 HOH A 97 597 54 HOH HOH . F 6 HOH A 98 598 110 HOH HOH . F 6 HOH A 99 599 82 HOH HOH . F 6 HOH A 100 600 36 HOH HOH . F 6 HOH A 101 601 22 HOH HOH . F 6 HOH A 102 602 93 HOH HOH . F 6 HOH A 103 603 87 HOH HOH . F 6 HOH A 104 604 121 HOH HOH . F 6 HOH A 105 605 73 HOH HOH . F 6 HOH A 106 606 75 HOH HOH . F 6 HOH A 107 607 38 HOH HOH . F 6 HOH A 108 608 48 HOH HOH . F 6 HOH A 109 609 46 HOH HOH . F 6 HOH A 110 610 30 HOH HOH . F 6 HOH A 111 611 33 HOH HOH . F 6 HOH A 112 612 25 HOH HOH . F 6 HOH A 113 613 57 HOH HOH . F 6 HOH A 114 614 142 HOH HOH . F 6 HOH A 115 615 104 HOH HOH . F 6 HOH A 116 616 65 HOH HOH . F 6 HOH A 117 617 15 HOH HOH . F 6 HOH A 118 618 114 HOH HOH . F 6 HOH A 119 619 149 HOH HOH . F 6 HOH A 120 620 168 HOH HOH . F 6 HOH A 121 621 92 HOH HOH . F 6 HOH A 122 622 136 HOH HOH . F 6 HOH A 123 623 145 HOH HOH . F 6 HOH A 124 624 141 HOH HOH . F 6 HOH A 125 625 128 HOH HOH . F 6 HOH A 126 626 27 HOH HOH . F 6 HOH A 127 627 124 HOH HOH . F 6 HOH A 128 628 71 HOH HOH . F 6 HOH A 129 629 83 HOH HOH . F 6 HOH A 130 630 66 HOH HOH . F 6 HOH A 131 631 101 HOH HOH . F 6 HOH A 132 632 69 HOH HOH . F 6 HOH A 133 633 157 HOH HOH . F 6 HOH A 134 634 170 HOH HOH . F 6 HOH A 135 635 61 HOH HOH . F 6 HOH A 136 636 165 HOH HOH . F 6 HOH A 137 637 116 HOH HOH . F 6 HOH A 138 638 156 HOH HOH . F 6 HOH A 139 639 139 HOH HOH . F 6 HOH A 140 640 146 HOH HOH . F 6 HOH A 141 641 123 HOH HOH . F 6 HOH A 142 642 171 HOH HOH . F 6 HOH A 143 643 106 HOH HOH . F 6 HOH A 144 644 89 HOH HOH . F 6 HOH A 145 645 113 HOH HOH . F 6 HOH A 146 646 129 HOH HOH . F 6 HOH A 147 647 135 HOH HOH . F 6 HOH A 148 648 95 HOH HOH . F 6 HOH A 149 649 166 HOH HOH . F 6 HOH A 150 650 151 HOH HOH . F 6 HOH A 151 651 167 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OXY . B . D 4 10.704 -6.812 -4.795 0.5 31.64 ? O1 OXY 403 A 1 HETATM 2 O O2 OXY . B . D 4 9.664 -7.181 -5.281 0.5 34.73 ? O2 OXY 403 A 1 # _model_server_stats.io_time_ms 20 _model_server_stats.parse_time_ms 21 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 300 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 2 #