data_6ZB1 # _model_server_result.job_id v-jlkrTOvHTLbnsapesScg _model_server_result.datetime_utc '2024-12-23 07:35:13' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zb1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":503}' # _entry.id 6ZB1 # _exptl.entry_id 6ZB1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 325.362 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description ~{N}5-cyclopropyl-~{N}3-methyl-2-oxidanylidene-1-(phenylmethyl)pyridine-3,5-dicarboxamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZB1 _cell.length_a 52.428 _cell.length_b 71.855 _cell.length_c 31.991 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZB1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C18 H19 N3 O3' _chem_comp.formula_weight 325.362 _chem_comp.id QCZ _chem_comp.mon_nstd_flag . _chem_comp.name ~{N}5-cyclopropyl-~{N}3-methyl-2-oxidanylidene-1-(phenylmethyl)pyridine-3,5-dicarboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 N05 QCZ sing 286 n n O08 C07 QCZ doub 287 n n N05 C07 QCZ sing 288 n n C07 C09 QCZ sing 289 n n C09 C10 QCZ doub 290 n n C09 C30 QCZ sing 291 n n O31 C30 QCZ doub 292 n n C10 C12 QCZ sing 293 n n C30 N15 QCZ sing 294 n n C12 C32 QCZ sing 295 n n C12 C13 QCZ doub 296 n n N15 C13 QCZ sing 297 n n N15 C16 QCZ sing 298 n n N34 C32 QCZ sing 299 n n N34 C36 QCZ sing 300 n n C38 C36 QCZ sing 301 n n C38 C41 QCZ sing 302 n n C32 O33 QCZ doub 303 n n C36 C41 QCZ sing 304 n n C16 C19 QCZ sing 305 n n C28 C19 QCZ doub 306 n y C28 C26 QCZ sing 307 n y C19 C20 QCZ sing 308 n y C26 C24 QCZ doub 309 n y C20 C22 QCZ doub 310 n y C24 C22 QCZ sing 311 n y C10 H1 QCZ sing 312 n n C13 H2 QCZ sing 313 n n C20 H3 QCZ sing 314 n n C22 H4 QCZ sing 315 n n C24 H5 QCZ sing 316 n n C26 H6 QCZ sing 317 n n C28 H7 QCZ sing 318 n n C01 H8 QCZ sing 319 n n C01 H9 QCZ sing 320 n n C01 H10 QCZ sing 321 n n N05 H11 QCZ sing 322 n n C16 H12 QCZ sing 323 n n C16 H13 QCZ sing 324 n n N34 H14 QCZ sing 325 n n C36 H15 QCZ sing 326 n n C38 H16 QCZ sing 327 n n C38 H17 QCZ sing 328 n n C41 H18 QCZ sing 329 n n C41 H19 QCZ sing 330 n n # _atom_sites.entry_id 6ZB1 _atom_sites.fract_transf_matrix[1][1] 0.019074 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013917 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.031259 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO AAA 1 501 1 EDO EDO . C 2 EDO AAA 1 502 2 EDO EDO . D 3 QCZ AAA 1 503 1 QCZ LIG . E 4 HOH AAA 1 601 29 HOH HOH . E 4 HOH AAA 2 602 57 HOH HOH . E 4 HOH AAA 3 603 198 HOH HOH . E 4 HOH AAA 4 604 89 HOH HOH . E 4 HOH AAA 5 605 20 HOH HOH . E 4 HOH AAA 6 606 21 HOH HOH . E 4 HOH AAA 7 607 129 HOH HOH . E 4 HOH AAA 8 608 6 HOH HOH . E 4 HOH AAA 9 609 55 HOH HOH . E 4 HOH AAA 10 610 80 HOH HOH . E 4 HOH AAA 11 611 23 HOH HOH . E 4 HOH AAA 12 612 47 HOH HOH . E 4 HOH AAA 13 613 27 HOH HOH . E 4 HOH AAA 14 614 125 HOH HOH . E 4 HOH AAA 15 615 116 HOH HOH . E 4 HOH AAA 16 616 39 HOH HOH . E 4 HOH AAA 17 617 31 HOH HOH . E 4 HOH AAA 18 618 108 HOH HOH . E 4 HOH AAA 19 619 10 HOH HOH . E 4 HOH AAA 20 620 168 HOH HOH . E 4 HOH AAA 21 621 16 HOH HOH . E 4 HOH AAA 22 622 117 HOH HOH . E 4 HOH AAA 23 623 83 HOH HOH . E 4 HOH AAA 24 624 151 HOH HOH . E 4 HOH AAA 25 625 79 HOH HOH . E 4 HOH AAA 26 626 59 HOH HOH . E 4 HOH AAA 27 627 9 HOH HOH . E 4 HOH AAA 28 628 44 HOH HOH . E 4 HOH AAA 29 629 74 HOH HOH . E 4 HOH AAA 30 630 32 HOH HOH . E 4 HOH AAA 31 631 71 HOH HOH . E 4 HOH AAA 32 632 4 HOH HOH . E 4 HOH AAA 33 633 69 HOH HOH . E 4 HOH AAA 34 634 37 HOH HOH . E 4 HOH AAA 35 635 77 HOH HOH . E 4 HOH AAA 36 636 40 HOH HOH . E 4 HOH AAA 37 637 8 HOH HOH . E 4 HOH AAA 38 638 76 HOH HOH . E 4 HOH AAA 39 639 12 HOH HOH . E 4 HOH AAA 40 640 67 HOH HOH . E 4 HOH AAA 41 641 64 HOH HOH . E 4 HOH AAA 42 642 112 HOH HOH . E 4 HOH AAA 43 643 181 HOH HOH . E 4 HOH AAA 44 644 1 HOH HOH . E 4 HOH AAA 45 645 94 HOH HOH . E 4 HOH AAA 46 646 15 HOH HOH . E 4 HOH AAA 47 647 60 HOH HOH . E 4 HOH AAA 48 648 18 HOH HOH . E 4 HOH AAA 49 649 96 HOH HOH . E 4 HOH AAA 50 650 17 HOH HOH . E 4 HOH AAA 51 651 119 HOH HOH . E 4 HOH AAA 52 652 26 HOH HOH . E 4 HOH AAA 53 653 2 HOH HOH . E 4 HOH AAA 54 654 52 HOH HOH . E 4 HOH AAA 55 655 49 HOH HOH . E 4 HOH AAA 56 656 115 HOH HOH . E 4 HOH AAA 57 657 36 HOH HOH . E 4 HOH AAA 58 658 78 HOH HOH . E 4 HOH AAA 59 659 7 HOH HOH . E 4 HOH AAA 60 660 22 HOH HOH . E 4 HOH AAA 61 661 104 HOH HOH . E 4 HOH AAA 62 662 5 HOH HOH . E 4 HOH AAA 63 663 35 HOH HOH . E 4 HOH AAA 64 664 133 HOH HOH . E 4 HOH AAA 65 665 184 HOH HOH . E 4 HOH AAA 66 666 51 HOH HOH . E 4 HOH AAA 67 667 25 HOH HOH . E 4 HOH AAA 68 668 173 HOH HOH . E 4 HOH AAA 69 669 62 HOH HOH . E 4 HOH AAA 70 670 46 HOH HOH . E 4 HOH AAA 71 671 43 HOH HOH . E 4 HOH AAA 72 672 13 HOH HOH . E 4 HOH AAA 73 673 48 HOH HOH . E 4 HOH AAA 74 674 135 HOH HOH . E 4 HOH AAA 75 675 11 HOH HOH . E 4 HOH AAA 76 676 41 HOH HOH . E 4 HOH AAA 77 677 87 HOH HOH . E 4 HOH AAA 78 678 50 HOH HOH . E 4 HOH AAA 79 679 93 HOH HOH . E 4 HOH AAA 80 680 63 HOH HOH . E 4 HOH AAA 81 681 106 HOH HOH . E 4 HOH AAA 82 682 75 HOH HOH . E 4 HOH AAA 83 683 61 HOH HOH . E 4 HOH AAA 84 684 103 HOH HOH . E 4 HOH AAA 85 685 140 HOH HOH . E 4 HOH AAA 86 686 72 HOH HOH . E 4 HOH AAA 87 687 53 HOH HOH . E 4 HOH AAA 88 688 91 HOH HOH . E 4 HOH AAA 89 689 99 HOH HOH . E 4 HOH AAA 90 690 126 HOH HOH . E 4 HOH AAA 91 691 145 HOH HOH . E 4 HOH AAA 92 692 150 HOH HOH . E 4 HOH AAA 93 693 14 HOH HOH . E 4 HOH AAA 94 694 28 HOH HOH . E 4 HOH AAA 95 695 24 HOH HOH . E 4 HOH AAA 96 696 3 HOH HOH . E 4 HOH AAA 97 697 86 HOH HOH . E 4 HOH AAA 98 698 19 HOH HOH . E 4 HOH AAA 99 699 82 HOH HOH . E 4 HOH AAA 100 700 56 HOH HOH . E 4 HOH AAA 101 701 128 HOH HOH . E 4 HOH AAA 102 702 177 HOH HOH . E 4 HOH AAA 103 703 134 HOH HOH . E 4 HOH AAA 104 704 34 HOH HOH . E 4 HOH AAA 105 705 147 HOH HOH . E 4 HOH AAA 106 706 107 HOH HOH . E 4 HOH AAA 107 707 90 HOH HOH . E 4 HOH AAA 108 708 159 HOH HOH . E 4 HOH AAA 109 709 42 HOH HOH . E 4 HOH AAA 110 710 111 HOH HOH . E 4 HOH AAA 111 711 146 HOH HOH . E 4 HOH AAA 112 712 144 HOH HOH . E 4 HOH AAA 113 713 73 HOH HOH . E 4 HOH AAA 114 714 178 HOH HOH . E 4 HOH AAA 115 715 188 HOH HOH . E 4 HOH AAA 116 716 68 HOH HOH . E 4 HOH AAA 117 717 136 HOH HOH . E 4 HOH AAA 118 718 167 HOH HOH . E 4 HOH AAA 119 719 33 HOH HOH . E 4 HOH AAA 120 720 153 HOH HOH . E 4 HOH AAA 121 721 113 HOH HOH . E 4 HOH AAA 122 722 97 HOH HOH . E 4 HOH AAA 123 723 156 HOH HOH . E 4 HOH AAA 124 724 183 HOH HOH . E 4 HOH AAA 125 725 123 HOH HOH . E 4 HOH AAA 126 726 84 HOH HOH . E 4 HOH AAA 127 727 189 HOH HOH . E 4 HOH AAA 128 728 154 HOH HOH . E 4 HOH AAA 129 729 121 HOH HOH . E 4 HOH AAA 130 730 137 HOH HOH . E 4 HOH AAA 131 731 164 HOH HOH . E 4 HOH AAA 132 732 88 HOH HOH . E 4 HOH AAA 133 733 105 HOH HOH . E 4 HOH AAA 134 734 58 HOH HOH . E 4 HOH AAA 135 735 143 HOH HOH . E 4 HOH AAA 136 736 142 HOH HOH . E 4 HOH AAA 137 737 66 HOH HOH . E 4 HOH AAA 138 738 175 HOH HOH . E 4 HOH AAA 139 739 155 HOH HOH . E 4 HOH AAA 140 740 186 HOH HOH . E 4 HOH AAA 141 741 98 HOH HOH . E 4 HOH AAA 142 742 157 HOH HOH . E 4 HOH AAA 143 743 172 HOH HOH . E 4 HOH AAA 144 744 109 HOH HOH . E 4 HOH AAA 145 745 192 HOH HOH . E 4 HOH AAA 146 746 65 HOH HOH . E 4 HOH AAA 147 747 38 HOH HOH . E 4 HOH AAA 148 748 127 HOH HOH . E 4 HOH AAA 149 749 132 HOH HOH . E 4 HOH AAA 150 750 95 HOH HOH . E 4 HOH AAA 151 751 190 HOH HOH . E 4 HOH AAA 152 752 101 HOH HOH . E 4 HOH AAA 153 753 70 HOH HOH . E 4 HOH AAA 154 754 81 HOH HOH . E 4 HOH AAA 155 755 162 HOH HOH . E 4 HOH AAA 156 756 120 HOH HOH . E 4 HOH AAA 157 757 196 HOH HOH . E 4 HOH AAA 158 758 149 HOH HOH . E 4 HOH AAA 159 759 160 HOH HOH . E 4 HOH AAA 160 760 92 HOH HOH . E 4 HOH AAA 161 761 174 HOH HOH . E 4 HOH AAA 162 762 194 HOH HOH . E 4 HOH AAA 163 763 85 HOH HOH . E 4 HOH AAA 164 764 45 HOH HOH . E 4 HOH AAA 165 765 131 HOH HOH . E 4 HOH AAA 166 766 130 HOH HOH . E 4 HOH AAA 167 767 30 HOH HOH . E 4 HOH AAA 168 768 122 HOH HOH . E 4 HOH AAA 169 769 114 HOH HOH . E 4 HOH AAA 170 770 158 HOH HOH . E 4 HOH AAA 171 771 176 HOH HOH . E 4 HOH AAA 172 772 141 HOH HOH . E 4 HOH AAA 173 773 199 HOH HOH . E 4 HOH AAA 174 774 185 HOH HOH . E 4 HOH AAA 175 775 118 HOH HOH . E 4 HOH AAA 176 776 191 HOH HOH . E 4 HOH AAA 177 777 139 HOH HOH . E 4 HOH AAA 178 778 193 HOH HOH . E 4 HOH AAA 179 779 169 HOH HOH . E 4 HOH AAA 180 780 170 HOH HOH . E 4 HOH AAA 181 781 54 HOH HOH . E 4 HOH AAA 182 782 182 HOH HOH . E 4 HOH AAA 183 783 187 HOH HOH . E 4 HOH AAA 184 784 166 HOH HOH . E 4 HOH AAA 185 785 110 HOH HOH . E 4 HOH AAA 186 786 161 HOH HOH . E 4 HOH AAA 187 787 138 HOH HOH . E 4 HOH AAA 188 788 102 HOH HOH . E 4 HOH AAA 189 789 152 HOH HOH . E 4 HOH AAA 190 790 171 HOH HOH . E 4 HOH AAA 191 791 165 HOH HOH . E 4 HOH AAA 192 792 124 HOH HOH . E 4 HOH AAA 193 793 179 HOH HOH . E 4 HOH AAA 194 794 100 HOH HOH . E 4 HOH AAA 195 795 148 HOH HOH . E 4 HOH AAA 196 796 197 HOH HOH . E 4 HOH AAA 197 797 163 HOH HOH . E 4 HOH AAA 198 798 195 HOH HOH . E 4 HOH AAA 199 799 180 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 QCZ . . . D 3 16.755 -7.408 8.207 1 12.05 ? C10 QCZ 503 AAA 1 HETATM 2 C C13 QCZ . . . D 3 18.378 -6.942 9.877 1 12.64 ? C13 QCZ 503 AAA 1 HETATM 3 C C20 QCZ . . . D 3 19.065 -4.619 12.765 1 16.12 ? C20 QCZ 503 AAA 1 HETATM 4 C C22 QCZ . . . D 3 18.432 -4.211 13.928 1 16.76 ? C22 QCZ 503 AAA 1 HETATM 5 C C24 QCZ . . . D 3 17.292 -3.437 13.865 1 16.08 ? C24 QCZ 503 AAA 1 HETATM 6 C C26 QCZ . . . D 3 16.795 -3.061 12.636 1 15.17 ? C26 QCZ 503 AAA 1 HETATM 7 C C28 QCZ . . . D 3 17.431 -3.464 11.473 1 15.15 ? C28 QCZ 503 AAA 1 HETATM 8 C C01 QCZ . . . D 3 14.976 -3.857 5.317 1 11.28 ? C01 QCZ 503 AAA 1 HETATM 9 N N05 QCZ . . . D 3 15.859 -4.39 6.338 1 11.21 ? N05 QCZ 503 AAA 1 HETATM 10 C C07 QCZ . . . D 3 15.826 -5.667 6.703 1 11.51 ? C07 QCZ 503 AAA 1 HETATM 11 O O08 QCZ . . . D 3 15.007 -6.456 6.227 1 10.92 ? O08 QCZ 503 AAA 1 HETATM 12 C C09 QCZ . . . D 3 16.747 -6.111 7.793 1 11.88 ? C09 QCZ 503 AAA 1 HETATM 13 C C12 QCZ . . . D 3 17.591 -7.857 9.275 1 12.47 ? C12 QCZ 503 AAA 1 HETATM 14 N N15 QCZ . . . D 3 18.414 -5.627 9.497 1 13.34 ? N15 QCZ 503 AAA 1 HETATM 15 C C16 QCZ . . . D 3 19.261 -4.69 10.247 1 14.09 ? C16 QCZ 503 AAA 1 HETATM 16 C C19 QCZ . . . D 3 18.581 -4.239 11.523 1 15.1 ? C19 QCZ 503 AAA 1 HETATM 17 C C30 QCZ . . . D 3 17.61 -5.114 8.477 1 12.46 ? C30 QCZ 503 AAA 1 HETATM 18 O O31 QCZ . . . D 3 17.668 -3.929 8.175 1 12.83 ? O31 QCZ 503 AAA 1 HETATM 19 C C32 QCZ . . . D 3 17.668 -9.248 9.774 1 12.75 ? C32 QCZ 503 AAA 1 HETATM 20 O O33 QCZ . . . D 3 18.638 -9.629 10.43 1 13.04 ? O33 QCZ 503 AAA 1 HETATM 21 N N34 QCZ . . . D 3 16.627 -10.05 9.499 1 13.01 ? N34 QCZ 503 AAA 1 HETATM 22 C C36 QCZ . . . D 3 16.575 -11.439 9.944 1 13.27 ? C36 QCZ 503 AAA 1 HETATM 23 C C38 QCZ . . . D 3 15.402 -12.255 9.584 1 13.42 ? C38 QCZ 503 AAA 1 HETATM 24 C C41 QCZ . . . D 3 15.595 -11.801 10.982 1 13.55 ? C41 QCZ 503 AAA 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 24 #