data_6ZBV # _model_server_result.job_id WtjCOxd-qJhU-swYy9qySw _model_server_result.datetime_utc '2024-11-18 04:15:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zbv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 6ZBV # _exptl.entry_id 6ZBV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 567.498 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.38 _cell.angle_gamma 90 _cell.entry_id 6ZBV _cell.length_a 65.17 _cell.length_b 58.14 _cell.length_c 122.31 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZBV _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 130 A CYS 220 1_555 A SG CYS 139 A CYS 229 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? disulf ? disulf2 B SG CYS 22 B CYS 22 1_555 B SG CYS 96 B CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? # _chem_comp.formula 'C24 H23 F6 N O6 S' _chem_comp.formula_weight 567.498 _chem_comp.id QET _chem_comp.mon_nstd_flag . _chem_comp.name '[5-fluoranyl-6-(oxan-4-yloxy)-1,3-dihydroisoindol-2-yl]-[5-methylsulfonyl-2-[2,2,3,3,3-pentakis(fluoranyl)propoxy]phenyl]methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O02 S01 QET doub 275 n n O01 S01 QET doub 276 n n S01 C01 QET sing 277 n n S01 C02 QET sing 278 n n C02 C03 QET doub 279 n y C02 C19 QET sing 280 n y C03 C04 QET sing 281 n y C19 C09 QET doub 282 n y C04 C05 QET doub 283 n y C09 C05 QET sing 284 n y C09 C10 QET sing 285 n n C05 O03 QET sing 286 n n O04 C10 QET doub 287 n n C10 N01 QET sing 288 n n O03 C06 QET sing 289 n n C06 C07 QET sing 290 n n N01 C11 QET sing 291 n n N01 C18 QET sing 292 n n F04 C08 QET sing 293 n n C11 C12 QET sing 294 n n F05 C08 QET sing 295 n n C08 C07 QET sing 296 n n C08 F03 QET sing 297 n n C18 C17 QET sing 298 n n C07 F02 QET sing 299 n n C07 F01 QET sing 300 n n C12 C17 QET doub 301 n y C12 C13 QET sing 302 n y C17 C16 QET sing 303 n y C13 C14 QET doub 304 n y C16 C15 QET doub 305 n y C14 C15 QET sing 306 n y C14 F06 QET sing 307 n n C15 O05 QET sing 308 n n O05 C22 QET sing 309 n n C22 C23 QET sing 310 n n C22 C21 QET sing 311 n n C23 C24 QET sing 312 n n C21 C20 QET sing 313 n n C24 O06 QET sing 314 n n C20 O06 QET sing 315 n n C13 H03 QET sing 316 n n C20 H19 QET sing 317 n n C20 H11 QET sing 318 n n C21 H20 QET sing 319 n n C21 H12 QET sing 320 n n C22 H06 QET sing 321 n n C24 H14 QET sing 322 n n C24 H22 QET sing 323 n n C01 H23 QET sing 324 n n C01 H07 QET sing 325 n n C01 H15 QET sing 326 n n C03 H01 QET sing 327 n n C04 H02 QET sing 328 n n C06 H16 QET sing 329 n n C06 H08 QET sing 330 n n C11 H09 QET sing 331 n n C11 H17 QET sing 332 n n C16 H04 QET sing 333 n n C18 H10 QET sing 334 n n C18 H18 QET sing 335 n n C19 H05 QET sing 336 n n C23 H21 QET sing 337 n n C23 H13 QET sing 338 n n # _atom_sites.entry_id 6ZBV _atom_sites.fract_transf_matrix[1][1] 0.015344 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002811 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.0172 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008312 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id QET _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 701 _pdbx_nonpoly_scheme.auth_seq_num 701 _pdbx_nonpoly_scheme.pdb_mon_id QET _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 QET . . . C 3 -6.66 7.052 35.978 1 117.44 ? C10 QET 701 A 1 HETATM 2 C C13 QET . . . C 3 -3.979 4.717 39.844 1 117.87 ? C13 QET 701 A 1 HETATM 3 C C15 QET . . . C 3 -5.493 4.626 41.606 1 118.52 ? C15 QET 701 A 1 HETATM 4 C C17 QET . . . C 3 -6.249 5.716 39.467 1 117.87 ? C17 QET 701 A 1 HETATM 5 C C20 QET . . . C 3 -5.395 3.188 46.375 1 120.19 ? C20 QET 701 A 1 HETATM 6 C C21 QET . . . C 3 -6.181 3.504 45.078 1 119.92 ? C21 QET 701 A 1 HETATM 7 C C22 QET . . . C 3 -5.181 3.836 43.949 1 119.66 ? C22 QET 701 A 1 HETATM 8 C C24 QET . . . C 3 -3.53 4.513 45.739 1 120.09 ? C24 QET 701 A 1 HETATM 9 C C01 QET . . . C 3 -4.538 4.111 31.993 1 116.87 ? C01 QET 701 A 1 HETATM 10 N N01 QET . . . C 3 -6.217 6.493 37.235 1 117.53 ? N01 QET 701 A 1 HETATM 11 O O01 QET . . . C 3 -5.769 6.123 30.695 1 117 ? O01 QET 701 A 1 HETATM 12 S S01 QET . . . C 3 -4.527 5.838 31.428 1 116.93 ? S01 QET 701 A 1 HETATM 13 C C02 QET . . . C 3 -4.492 6.833 32.915 1 117.2 ? C02 QET 701 A 1 HETATM 14 O O02 QET . . . C 3 -3.347 6.133 30.598 1 116.91 ? O02 QET 701 A 1 HETATM 15 C C03 QET . . . C 3 -3.49 7.743 33.181 1 117.26 ? C03 QET 701 A 1 HETATM 16 O O03 QET . . . C 3 -4.779 8.951 36.465 1 118.05 ? O03 QET 701 A 1 HETATM 17 C C04 QET . . . C 3 -3.532 8.466 34.395 1 117.43 ? C04 QET 701 A 1 HETATM 18 O O04 QET . . . C 3 -7.778 7.407 35.811 1 117.36 ? O04 QET 701 A 1 HETATM 19 C C05 QET . . . C 3 -4.574 8.203 35.266 1 117.67 ? C05 QET 701 A 1 HETATM 20 O O05 QET . . . C 3 -6.001 4.264 42.91 1 119.27 ? O05 QET 701 A 1 HETATM 21 C C06 QET . . . C 3 -3.686 9.464 37.231 1 118.35 ? C06 QET 701 A 1 HETATM 22 O O06 QET . . . C 3 -4.526 4.247 46.67 1 120.33 ? O06 QET 701 A 1 HETATM 23 C C07 QET . . . C 3 -4.339 10.061 38.503 1 118.72 ? C07 QET 701 A 1 HETATM 24 C C08 QET . . . C 3 -5.142 11.346 38.213 1 118.65 ? C08 QET 701 A 1 HETATM 25 C C09 QET . . . C 3 -5.546 7.279 34.943 1 117.52 ? C09 QET 701 A 1 HETATM 26 C C11 QET . . . C 3 -5.05 5.975 37.608 1 117.55 ? C11 QET 701 A 1 HETATM 27 C C12 QET . . . C 3 -4.939 5.457 38.835 1 117.72 ? C12 QET 701 A 1 HETATM 28 C C14 QET . . . C 3 -4.356 4.341 41.083 1 118.08 ? C14 QET 701 A 1 HETATM 29 C C16 QET . . . C 3 -6.425 5.22 40.943 1 118.17 ? C16 QET 701 A 1 HETATM 30 C C18 QET . . . C 3 -7.263 6.413 38.343 1 117.76 ? C18 QET 701 A 1 HETATM 31 C C19 QET . . . C 3 -5.534 6.56 33.792 1 117.47 ? C19 QET 701 A 1 HETATM 32 C C23 QET . . . C 3 -4.184 4.96 44.395 1 119.81 ? C23 QET 701 A 1 HETATM 33 F F01 QET . . . C 3 -3.364 10.321 39.401 1 118.91 ? F01 QET 701 A 1 HETATM 34 F F02 QET . . . C 3 -5.198 9.168 39.065 1 118.99 ? F02 QET 701 A 1 HETATM 35 F F03 QET . . . C 3 -5.69 11.749 39.39 1 118.7 ? F03 QET 701 A 1 HETATM 36 F F04 QET . . . C 3 -6.145 11.127 37.324 1 118.5 ? F04 QET 701 A 1 HETATM 37 F F05 QET . . . C 3 -4.318 12.317 37.715 1 118.67 ? F05 QET 701 A 1 HETATM 38 F F06 QET . . . C 3 -3.441 3.66 41.8 1 117.85 ? F06 QET 701 A 1 HETATM 39 H H03 QET . . . C 3 -3.194 4.505 39.546 1 141.44 ? H03 QET 701 A 1 HETATM 40 H H19 QET . . . C 3 -4.905 2.389 46.266 1 144.23 ? H19 QET 701 A 1 HETATM 41 H H11 QET . . . C 3 -6.012 3.073 47.085 1 144.23 ? H11 QET 701 A 1 HETATM 42 H H20 QET . . . C 3 -6.718 2.761 44.833 1 143.9 ? H20 QET 701 A 1 HETATM 43 H H12 QET . . . C 3 -6.74 4.254 45.235 1 143.9 ? H12 QET 701 A 1 HETATM 44 H H06 QET . . . C 3 -4.715 3.054 43.689 1 143.6 ? H06 QET 701 A 1 HETATM 45 H H14 QET . . . C 3 -2.966 5.213 46.061 1 144.11 ? H14 QET 701 A 1 HETATM 46 H H22 QET . . . C 3 -3.014 3.728 45.6 1 144.11 ? H22 QET 701 A 1 HETATM 47 H H23 QET . . . C 3 -4.509 3.556 31.223 1 140.25 ? H23 QET 701 A 1 HETATM 48 H H07 QET . . . C 3 -5.329 3.952 32.498 1 140.25 ? H07 QET 701 A 1 HETATM 49 H H15 QET . . . C 3 -3.767 3.982 32.536 1 140.25 ? H15 QET 701 A 1 HETATM 50 H H01 QET . . . C 3 -2.802 7.889 32.562 1 140.72 ? H01 QET 701 A 1 HETATM 51 H H02 QET . . . C 3 -2.896 9.127 34.583 1 140.91 ? H02 QET 701 A 1 HETATM 52 H H16 QET . . . C 3 -3.215 10.133 36.742 1 142.02 ? H16 QET 701 A 1 HETATM 53 H H08 QET . . . C 3 -3.118 8.757 37.5 1 142.02 ? H08 QET 701 A 1 HETATM 54 H H09 QET . . . C 3 -4.362 6.634 37.518 1 141.06 ? H09 QET 701 A 1 HETATM 55 H H17 QET . . . C 3 -4.868 5.251 37.01 1 141.06 ? H17 QET 701 A 1 HETATM 56 H H04 QET . . . C 3 -7.192 5.364 41.307 1 141.8 ? H04 QET 701 A 1 HETATM 57 H H10 QET . . . C 3 -7.976 5.827 38.148 1 141.31 ? H10 QET 701 A 1 HETATM 58 H H18 QET . . . C 3 -7.531 7.269 38.645 1 141.31 ? H18 QET 701 A 1 HETATM 59 H H05 QET . . . C 3 -6.193 5.923 33.603 1 140.96 ? H05 QET 701 A 1 HETATM 60 H H21 QET . . . C 3 -4.654 5.778 44.531 1 143.77 ? H21 QET 701 A 1 HETATM 61 H H13 QET . . . C 3 -3.505 5.084 43.74 1 143.77 ? H13 QET 701 A 1 # _model_server_stats.io_time_ms 22 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 242 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 61 #