data_6ZED
#
_model_server_result.job_id            uRm0HgimVOYiW87y5QIrew 
_model_server_result.datetime_utc      '2024-10-19 03:52:42' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zed 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":502}' 
#
_entry.id    6ZED 
#
_exptl.entry_id    6ZED 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6ZED 
_cell.length_a            37.73 
_cell.length_b            43.99 
_cell.length_c            78.06 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZED 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     6ZED 
_atom_sites.fract_transf_matrix[1][1]    0.026504 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.022732 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.012811 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 QGN AAA 1 501 501 QGN LIG . 
C 3 EDO AAA 1 502 601 EDO EDO . 
D 3 EDO AAA 1 503 701 EDO EDO . 
E 4 HOH AAA 1 601 44 HOH HOH . 
E 4 HOH AAA 2 602 399 HOH HOH . 
E 4 HOH AAA 3 603 398 HOH HOH . 
E 4 HOH AAA 4 604 404 HOH HOH . 
E 4 HOH AAA 5 605 481 HOH HOH . 
E 4 HOH AAA 6 606 415 HOH HOH . 
E 4 HOH AAA 7 607 430 HOH HOH . 
E 4 HOH AAA 8 608 15 HOH HOH . 
E 4 HOH AAA 9 609 316 HOH HOH . 
E 4 HOH AAA 10 610 46 HOH HOH . 
E 4 HOH AAA 11 611 311 HOH HOH . 
E 4 HOH AAA 12 612 391 HOH HOH . 
E 4 HOH AAA 13 613 474 HOH HOH . 
E 4 HOH AAA 14 614 475 HOH HOH . 
E 4 HOH AAA 15 615 408 HOH HOH . 
E 4 HOH AAA 16 616 21 HOH HOH . 
E 4 HOH AAA 17 617 358 HOH HOH . 
E 4 HOH AAA 18 618 39 HOH HOH . 
E 4 HOH AAA 19 619 5 HOH HOH . 
E 4 HOH AAA 20 620 485 HOH HOH . 
E 4 HOH AAA 21 621 384 HOH HOH . 
E 4 HOH AAA 22 622 402 HOH HOH . 
E 4 HOH AAA 23 623 432 HOH HOH . 
E 4 HOH AAA 24 624 324 HOH HOH . 
E 4 HOH AAA 25 625 397 HOH HOH . 
E 4 HOH AAA 26 626 17 HOH HOH . 
E 4 HOH AAA 27 627 401 HOH HOH . 
E 4 HOH AAA 28 628 27 HOH HOH . 
E 4 HOH AAA 29 629 389 HOH HOH . 
E 4 HOH AAA 30 630 332 HOH HOH . 
E 4 HOH AAA 31 631 326 HOH HOH . 
E 4 HOH AAA 32 632 353 HOH HOH . 
E 4 HOH AAA 33 633 368 HOH HOH . 
E 4 HOH AAA 34 634 337 HOH HOH . 
E 4 HOH AAA 35 635 409 HOH HOH . 
E 4 HOH AAA 36 636 349 HOH HOH . 
E 4 HOH AAA 37 637 306 HOH HOH . 
E 4 HOH AAA 38 638 323 HOH HOH . 
E 4 HOH AAA 39 639 333 HOH HOH . 
E 4 HOH AAA 40 640 379 HOH HOH . 
E 4 HOH AAA 41 641 334 HOH HOH . 
E 4 HOH AAA 42 642 30 HOH HOH . 
E 4 HOH AAA 43 643 373 HOH HOH . 
E 4 HOH AAA 44 644 361 HOH HOH . 
E 4 HOH AAA 45 645 491 HOH HOH . 
E 4 HOH AAA 46 646 6 HOH HOH . 
E 4 HOH AAA 47 647 335 HOH HOH . 
E 4 HOH AAA 48 648 315 HOH HOH . 
E 4 HOH AAA 49 649 458 HOH HOH . 
E 4 HOH AAA 50 650 394 HOH HOH . 
E 4 HOH AAA 51 651 318 HOH HOH . 
E 4 HOH AAA 52 652 392 HOH HOH . 
E 4 HOH AAA 53 653 304 HOH HOH . 
E 4 HOH AAA 54 654 38 HOH HOH . 
E 4 HOH AAA 55 655 26 HOH HOH . 
E 4 HOH AAA 56 656 385 HOH HOH . 
E 4 HOH AAA 57 657 369 HOH HOH . 
E 4 HOH AAA 58 658 319 HOH HOH . 
E 4 HOH AAA 59 659 310 HOH HOH . 
E 4 HOH AAA 60 660 1 HOH HOH . 
E 4 HOH AAA 61 661 2 HOH HOH . 
E 4 HOH AAA 62 662 320 HOH HOH . 
E 4 HOH AAA 63 663 346 HOH HOH . 
E 4 HOH AAA 64 664 448 HOH HOH . 
E 4 HOH AAA 65 665 428 HOH HOH . 
E 4 HOH AAA 66 666 400 HOH HOH . 
E 4 HOH AAA 67 667 325 HOH HOH . 
E 4 HOH AAA 68 668 343 HOH HOH . 
E 4 HOH AAA 69 669 327 HOH HOH . 
E 4 HOH AAA 70 670 454 HOH HOH . 
E 4 HOH AAA 71 671 322 HOH HOH . 
E 4 HOH AAA 72 672 461 HOH HOH . 
E 4 HOH AAA 73 673 383 HOH HOH . 
E 4 HOH AAA 74 674 378 HOH HOH . 
E 4 HOH AAA 75 675 12 HOH HOH . 
E 4 HOH AAA 76 676 456 HOH HOH . 
E 4 HOH AAA 77 677 488 HOH HOH . 
E 4 HOH AAA 78 678 403 HOH HOH . 
E 4 HOH AAA 79 679 301 HOH HOH . 
E 4 HOH AAA 80 680 20 HOH HOH . 
E 4 HOH AAA 81 681 348 HOH HOH . 
E 4 HOH AAA 82 682 365 HOH HOH . 
E 4 HOH AAA 83 683 411 HOH HOH . 
E 4 HOH AAA 84 684 359 HOH HOH . 
E 4 HOH AAA 85 685 367 HOH HOH . 
E 4 HOH AAA 86 686 469 HOH HOH . 
E 4 HOH AAA 87 687 309 HOH HOH . 
E 4 HOH AAA 88 688 434 HOH HOH . 
E 4 HOH AAA 89 689 357 HOH HOH . 
E 4 HOH AAA 90 690 312 HOH HOH . 
E 4 HOH AAA 91 691 339 HOH HOH . 
E 4 HOH AAA 92 692 470 HOH HOH . 
E 4 HOH AAA 93 693 363 HOH HOH . 
E 4 HOH AAA 94 694 35 HOH HOH . 
E 4 HOH AAA 95 695 374 HOH HOH . 
E 4 HOH AAA 96 696 321 HOH HOH . 
E 4 HOH AAA 97 697 381 HOH HOH . 
E 4 HOH AAA 98 698 377 HOH HOH . 
E 4 HOH AAA 99 699 467 HOH HOH . 
E 4 HOH AAA 100 700 468 HOH HOH . 
E 4 HOH AAA 101 701 413 HOH HOH . 
E 4 HOH AAA 102 702 445 HOH HOH . 
E 4 HOH AAA 103 703 463 HOH HOH . 
E 4 HOH AAA 104 704 341 HOH HOH . 
E 4 HOH AAA 105 705 426 HOH HOH . 
E 4 HOH AAA 106 706 22 HOH HOH . 
E 4 HOH AAA 107 707 420 HOH HOH . 
E 4 HOH AAA 108 708 36 HOH HOH . 
E 4 HOH AAA 109 709 329 HOH HOH . 
E 4 HOH AAA 110 710 4 HOH HOH . 
E 4 HOH AAA 111 711 414 HOH HOH . 
E 4 HOH AAA 112 712 438 HOH HOH . 
E 4 HOH AAA 113 713 453 HOH HOH . 
E 4 HOH AAA 114 714 29 HOH HOH . 
E 4 HOH AAA 115 715 364 HOH HOH . 
E 4 HOH AAA 116 716 360 HOH HOH . 
E 4 HOH AAA 117 717 455 HOH HOH . 
E 4 HOH AAA 118 718 307 HOH HOH . 
E 4 HOH AAA 119 719 305 HOH HOH . 
E 4 HOH AAA 120 720 472 HOH HOH . 
E 4 HOH AAA 121 721 336 HOH HOH . 
E 4 HOH AAA 122 722 331 HOH HOH . 
E 4 HOH AAA 123 723 477 HOH HOH . 
E 4 HOH AAA 124 724 313 HOH HOH . 
E 4 HOH AAA 125 725 355 HOH HOH . 
E 4 HOH AAA 126 726 338 HOH HOH . 
E 4 HOH AAA 127 727 13 HOH HOH . 
E 4 HOH AAA 128 728 28 HOH HOH . 
E 4 HOH AAA 129 729 314 HOH HOH . 
E 4 HOH AAA 130 730 425 HOH HOH . 
E 4 HOH AAA 131 731 423 HOH HOH . 
E 4 HOH AAA 132 732 372 HOH HOH . 
E 4 HOH AAA 133 733 302 HOH HOH . 
E 4 HOH AAA 134 734 362 HOH HOH . 
E 4 HOH AAA 135 735 427 HOH HOH . 
E 4 HOH AAA 136 736 317 HOH HOH . 
E 4 HOH AAA 137 737 366 HOH HOH . 
E 4 HOH AAA 138 738 344 HOH HOH . 
E 4 HOH AAA 139 739 345 HOH HOH . 
E 4 HOH AAA 140 740 436 HOH HOH . 
E 4 HOH AAA 141 741 342 HOH HOH . 
E 4 HOH AAA 142 742 405 HOH HOH . 
E 4 HOH AAA 143 743 303 HOH HOH . 
E 4 HOH AAA 144 744 443 HOH HOH . 
E 4 HOH AAA 145 745 23 HOH HOH . 
E 4 HOH AAA 146 746 347 HOH HOH . 
E 4 HOH AAA 147 747 308 HOH HOH . 
E 4 HOH AAA 148 748 480 HOH HOH . 
E 4 HOH AAA 149 749 11 HOH HOH . 
E 4 HOH AAA 150 750 429 HOH HOH . 
E 4 HOH AAA 151 751 375 HOH HOH . 
E 4 HOH AAA 152 752 464 HOH HOH . 
E 4 HOH AAA 153 753 422 HOH HOH . 
E 4 HOH AAA 154 754 350 HOH HOH . 
E 4 HOH AAA 155 755 406 HOH HOH . 
E 4 HOH AAA 156 756 439 HOH HOH . 
E 4 HOH AAA 157 757 449 HOH HOH . 
E 4 HOH AAA 158 758 412 HOH HOH . 
E 4 HOH AAA 159 759 450 HOH HOH . 
E 4 HOH AAA 160 760 431 HOH HOH . 
E 4 HOH AAA 161 761 388 HOH HOH . 
E 4 HOH AAA 162 762 446 HOH HOH . 
E 4 HOH AAA 163 763 31 HOH HOH . 
E 4 HOH AAA 164 764 10 HOH HOH . 
E 4 HOH AAA 165 765 487 HOH HOH . 
E 4 HOH AAA 166 766 424 HOH HOH . 
E 4 HOH AAA 167 767 441 HOH HOH . 
E 4 HOH AAA 168 768 356 HOH HOH . 
E 4 HOH AAA 169 769 9 HOH HOH . 
E 4 HOH AAA 170 770 417 HOH HOH . 
E 4 HOH AAA 171 771 452 HOH HOH . 
E 4 HOH AAA 172 772 330 HOH HOH . 
E 4 HOH AAA 173 773 14 HOH HOH . 
E 4 HOH AAA 174 774 351 HOH HOH . 
E 4 HOH AAA 175 775 18 HOH HOH . 
E 4 HOH AAA 176 776 478 HOH HOH . 
E 4 HOH AAA 177 777 492 HOH HOH . 
E 4 HOH AAA 178 778 465 HOH HOH . 
E 4 HOH AAA 179 779 390 HOH HOH . 
E 4 HOH AAA 180 780 382 HOH HOH . 
E 4 HOH AAA 181 781 354 HOH HOH . 
E 4 HOH AAA 182 782 19 HOH HOH . 
E 4 HOH AAA 183 783 3 HOH HOH . 
E 4 HOH AAA 184 784 328 HOH HOH . 
E 4 HOH AAA 185 785 418 HOH HOH . 
E 4 HOH AAA 186 786 371 HOH HOH . 
E 4 HOH AAA 187 787 386 HOH HOH . 
E 4 HOH AAA 188 788 393 HOH HOH . 
E 4 HOH AAA 189 789 451 HOH HOH . 
E 4 HOH AAA 190 790 395 HOH HOH . 
E 4 HOH AAA 191 791 489 HOH HOH . 
E 4 HOH AAA 192 792 376 HOH HOH . 
E 4 HOH AAA 193 793 8 HOH HOH . 
E 4 HOH AAA 194 794 33 HOH HOH . 
E 4 HOH AAA 195 795 387 HOH HOH . 
E 4 HOH AAA 196 796 444 HOH HOH . 
E 4 HOH AAA 197 797 447 HOH HOH . 
E 4 HOH AAA 198 798 370 HOH HOH . 
E 4 HOH AAA 199 799 32 HOH HOH . 
E 4 HOH AAA 200 800 37 HOH HOH . 
E 4 HOH AAA 201 801 352 HOH HOH . 
E 4 HOH AAA 202 802 40 HOH HOH . 
E 4 HOH AAA 203 803 25 HOH HOH . 
E 4 HOH AAA 204 804 45 HOH HOH . 
E 4 HOH AAA 205 805 459 HOH HOH . 
E 4 HOH AAA 206 806 440 HOH HOH . 
E 4 HOH AAA 207 807 34 HOH HOH . 
E 4 HOH AAA 208 808 42 HOH HOH . 
E 4 HOH AAA 209 809 7 HOH HOH . 
E 4 HOH AAA 210 810 410 HOH HOH . 
E 4 HOH AAA 211 811 43 HOH HOH . 
E 4 HOH AAA 212 812 466 HOH HOH . 
E 4 HOH AAA 213 813 16 HOH HOH . 
E 4 HOH AAA 214 814 435 HOH HOH . 
E 4 HOH AAA 215 815 41 HOH HOH . 
E 4 HOH AAA 216 816 419 HOH HOH . 
E 4 HOH AAA 217 817 486 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . C 3 27.576 17.428 -4.358 1 10.68 ? C1 EDO 502 AAA 1 
HETATM 2 O O1 EDO . . . C 3 28.082 16.349 -3.624 1 11.1 ? O1 EDO 502 AAA 1 
HETATM 3 C C2 EDO . . . C 3 27.224 17.121 -5.744 1 11.33 ? C2 EDO 502 AAA 1 
HETATM 4 O O2 EDO . . . C 3 28.372 16.569 -6.422 1 11.57 ? O2 EDO 502 AAA 1 
#
_model_server_stats.io_time_ms              8 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           326 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           4 
#