data_6ZF0 # _model_server_result.job_id tFmpkkYR-Zks1QBUshbRbg _model_server_result.datetime_utc '2025-01-10 20:13:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zf0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":708}' # _entry.id 6ZF0 # _exptl.entry_id 6ZF0 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'DIMETHYL SULFOXIDE' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ZF0 _cell.length_a 103.304 _cell.length_b 103.304 _cell.length_c 55.951 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZF0 _symmetry.cell_setting ? _symmetry.Int_Tables_number 169 _symmetry.space_group_name_Hall 'P 61' _symmetry.space_group_name_H-M 'P 61' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N ? 3 F N N ? 3 G N N ? 3 H N N ? 3 I N N ? 3 J N N ? 3 K N N ? 3 L N N # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id DMS _chem_comp.mon_nstd_flag . _chem_comp.name 'DIMETHYL SULFOXIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O DMS doub 83 n n S C1 DMS sing 84 n n S C2 DMS sing 85 n n C1 H11 DMS sing 86 n n C1 H12 DMS sing 87 n n C1 H13 DMS sing 88 n n C2 H21 DMS sing 89 n n C2 H22 DMS sing 90 n n C2 H23 DMS sing 91 n n # _atom_sites.entry_id 6ZF0 _atom_sites.fract_transf_matrix[1][1] 0.00968 _atom_sites.fract_transf_matrix[1][2] 0.005589 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011178 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017873 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 A 1 701 1 SO4 SO4 . C 3 DMS A 1 702 2 DMS DMS . D 3 DMS A 1 703 3 DMS DMS . E 3 DMS A 1 704 4 DMS DMS . F 3 DMS A 1 705 7 DMS DMS . G 3 DMS A 1 706 8 DMS DMS . H 3 DMS A 1 707 9 DMS DMS . I 3 DMS A 1 708 11 DMS DMS . J 3 DMS A 1 709 13 DMS DMS . K 3 DMS A 1 710 15 DMS DMS . L 3 DMS A 1 711 16 DMS DMS . M 4 QHT A 1 712 1 QHT UNL . N 5 HOH A 1 801 202 HOH HOH . N 5 HOH A 2 802 144 HOH HOH . N 5 HOH A 3 803 84 HOH HOH . N 5 HOH A 4 804 185 HOH HOH . N 5 HOH A 5 805 183 HOH HOH . N 5 HOH A 6 806 99 HOH HOH . N 5 HOH A 7 807 154 HOH HOH . N 5 HOH A 8 808 12 HOH HOH . N 5 HOH A 9 809 9 HOH HOH . N 5 HOH A 10 810 94 HOH HOH . N 5 HOH A 11 811 37 HOH HOH . N 5 HOH A 12 812 71 HOH HOH . N 5 HOH A 13 813 108 HOH HOH . N 5 HOH A 14 814 173 HOH HOH . N 5 HOH A 15 815 198 HOH HOH . N 5 HOH A 16 816 133 HOH HOH . N 5 HOH A 17 817 110 HOH HOH . N 5 HOH A 18 818 75 HOH HOH . N 5 HOH A 19 819 95 HOH HOH . N 5 HOH A 20 820 10 HOH HOH . N 5 HOH A 21 821 160 HOH HOH . N 5 HOH A 22 822 140 HOH HOH . N 5 HOH A 23 823 70 HOH HOH . N 5 HOH A 24 824 158 HOH HOH . N 5 HOH A 25 825 49 HOH HOH . N 5 HOH A 26 826 109 HOH HOH . N 5 HOH A 27 827 92 HOH HOH . N 5 HOH A 28 828 197 HOH HOH . N 5 HOH A 29 829 32 HOH HOH . N 5 HOH A 30 830 72 HOH HOH . N 5 HOH A 31 831 151 HOH HOH . N 5 HOH A 32 832 148 HOH HOH . N 5 HOH A 33 833 134 HOH HOH . N 5 HOH A 34 834 200 HOH HOH . N 5 HOH A 35 835 60 HOH HOH . N 5 HOH A 36 836 147 HOH HOH . N 5 HOH A 37 837 155 HOH HOH . N 5 HOH A 38 838 6 HOH HOH . N 5 HOH A 39 839 136 HOH HOH . N 5 HOH A 40 840 5 HOH HOH . N 5 HOH A 41 841 91 HOH HOH . N 5 HOH A 42 842 26 HOH HOH . N 5 HOH A 43 843 25 HOH HOH . N 5 HOH A 44 844 51 HOH HOH . N 5 HOH A 45 845 121 HOH HOH . N 5 HOH A 46 846 19 HOH HOH . N 5 HOH A 47 847 13 HOH HOH . N 5 HOH A 48 848 28 HOH HOH . N 5 HOH A 49 849 182 HOH HOH . N 5 HOH A 50 850 27 HOH HOH . N 5 HOH A 51 851 190 HOH HOH . N 5 HOH A 52 852 98 HOH HOH . N 5 HOH A 53 853 66 HOH HOH . N 5 HOH A 54 854 15 HOH HOH . N 5 HOH A 55 855 165 HOH HOH . N 5 HOH A 56 856 114 HOH HOH . N 5 HOH A 57 857 41 HOH HOH . N 5 HOH A 58 858 204 HOH HOH . N 5 HOH A 59 859 177 HOH HOH . N 5 HOH A 60 860 119 HOH HOH . N 5 HOH A 61 861 43 HOH HOH . N 5 HOH A 62 862 194 HOH HOH . N 5 HOH A 63 863 11 HOH HOH . N 5 HOH A 64 864 42 HOH HOH . N 5 HOH A 65 865 57 HOH HOH . N 5 HOH A 66 866 85 HOH HOH . N 5 HOH A 67 867 193 HOH HOH . N 5 HOH A 68 868 35 HOH HOH . N 5 HOH A 69 869 122 HOH HOH . N 5 HOH A 70 870 81 HOH HOH . N 5 HOH A 71 871 77 HOH HOH . N 5 HOH A 72 872 30 HOH HOH . N 5 HOH A 73 873 14 HOH HOH . N 5 HOH A 74 874 55 HOH HOH . N 5 HOH A 75 875 149 HOH HOH . N 5 HOH A 76 876 120 HOH HOH . N 5 HOH A 77 877 126 HOH HOH . N 5 HOH A 78 878 118 HOH HOH . N 5 HOH A 79 879 156 HOH HOH . N 5 HOH A 80 880 137 HOH HOH . N 5 HOH A 81 881 69 HOH HOH . N 5 HOH A 82 882 54 HOH HOH . N 5 HOH A 83 883 87 HOH HOH . N 5 HOH A 84 884 141 HOH HOH . N 5 HOH A 85 885 48 HOH HOH . N 5 HOH A 86 886 83 HOH HOH . N 5 HOH A 87 887 34 HOH HOH . N 5 HOH A 88 888 33 HOH HOH . N 5 HOH A 89 889 61 HOH HOH . N 5 HOH A 90 890 174 HOH HOH . N 5 HOH A 91 891 52 HOH HOH . N 5 HOH A 92 892 132 HOH HOH . N 5 HOH A 93 893 195 HOH HOH . N 5 HOH A 94 894 29 HOH HOH . N 5 HOH A 95 895 142 HOH HOH . N 5 HOH A 96 896 104 HOH HOH . N 5 HOH A 97 897 170 HOH HOH . N 5 HOH A 98 898 68 HOH HOH . N 5 HOH A 99 899 186 HOH HOH . N 5 HOH A 100 900 22 HOH HOH . N 5 HOH A 101 901 39 HOH HOH . N 5 HOH A 102 902 82 HOH HOH . N 5 HOH A 103 903 80 HOH HOH . N 5 HOH A 104 904 180 HOH HOH . N 5 HOH A 105 905 40 HOH HOH . N 5 HOH A 106 906 175 HOH HOH . N 5 HOH A 107 907 16 HOH HOH . N 5 HOH A 108 908 21 HOH HOH . N 5 HOH A 109 909 128 HOH HOH . N 5 HOH A 110 910 169 HOH HOH . N 5 HOH A 111 911 96 HOH HOH . N 5 HOH A 112 912 171 HOH HOH . N 5 HOH A 113 913 178 HOH HOH . N 5 HOH A 114 914 97 HOH HOH . N 5 HOH A 115 915 153 HOH HOH . N 5 HOH A 116 916 102 HOH HOH . N 5 HOH A 117 917 76 HOH HOH . N 5 HOH A 118 918 172 HOH HOH . N 5 HOH A 119 919 36 HOH HOH . N 5 HOH A 120 920 65 HOH HOH . N 5 HOH A 121 921 168 HOH HOH . N 5 HOH A 122 922 1 HOH HOH . N 5 HOH A 123 923 125 HOH HOH . N 5 HOH A 124 924 58 HOH HOH . N 5 HOH A 125 925 162 HOH HOH . N 5 HOH A 126 926 166 HOH HOH . N 5 HOH A 127 927 73 HOH HOH . N 5 HOH A 128 928 24 HOH HOH . N 5 HOH A 129 929 188 HOH HOH . N 5 HOH A 130 930 117 HOH HOH . N 5 HOH A 131 931 74 HOH HOH . N 5 HOH A 132 932 20 HOH HOH . N 5 HOH A 133 933 45 HOH HOH . N 5 HOH A 134 934 18 HOH HOH . N 5 HOH A 135 935 23 HOH HOH . N 5 HOH A 136 936 150 HOH HOH . N 5 HOH A 137 937 115 HOH HOH . N 5 HOH A 138 938 152 HOH HOH . N 5 HOH A 139 939 31 HOH HOH . N 5 HOH A 140 940 176 HOH HOH . N 5 HOH A 141 941 86 HOH HOH . N 5 HOH A 142 942 112 HOH HOH . N 5 HOH A 143 943 53 HOH HOH . N 5 HOH A 144 944 2 HOH HOH . N 5 HOH A 145 945 203 HOH HOH . N 5 HOH A 146 946 7 HOH HOH . N 5 HOH A 147 947 179 HOH HOH . N 5 HOH A 148 948 93 HOH HOH . N 5 HOH A 149 949 105 HOH HOH . N 5 HOH A 150 950 50 HOH HOH . N 5 HOH A 151 951 181 HOH HOH . N 5 HOH A 152 952 107 HOH HOH . N 5 HOH A 153 953 161 HOH HOH . N 5 HOH A 154 954 89 HOH HOH . N 5 HOH A 155 955 131 HOH HOH . N 5 HOH A 156 956 159 HOH HOH . N 5 HOH A 157 957 145 HOH HOH . N 5 HOH A 158 958 143 HOH HOH . N 5 HOH A 159 959 56 HOH HOH . N 5 HOH A 160 960 146 HOH HOH . N 5 HOH A 161 961 123 HOH HOH . N 5 HOH A 162 962 199 HOH HOH . N 5 HOH A 163 963 189 HOH HOH . N 5 HOH A 164 964 157 HOH HOH . N 5 HOH A 165 965 100 HOH HOH . N 5 HOH A 166 966 163 HOH HOH . N 5 HOH A 167 967 67 HOH HOH . N 5 HOH A 168 968 127 HOH HOH . N 5 HOH A 169 969 79 HOH HOH . N 5 HOH A 170 970 101 HOH HOH . N 5 HOH A 171 971 124 HOH HOH . N 5 HOH A 172 972 88 HOH HOH . N 5 HOH A 173 973 17 HOH HOH . N 5 HOH A 174 974 106 HOH HOH . N 5 HOH A 175 975 78 HOH HOH . N 5 HOH A 176 976 192 HOH HOH . N 5 HOH A 177 977 46 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S DMS . . . I 3 -22.931 -14.852 -16.534 1 66.84 ? S DMS 708 A 1 HETATM 2 O O DMS . . . I 3 -22.303 -13.745 -17.327 1 63.04 ? O DMS 708 A 1 HETATM 3 C C1 DMS . . . I 3 -24.431 -15.465 -17.343 1 56.64 ? C1 DMS 708 A 1 HETATM 4 C C2 DMS . . . I 3 -21.872 -16.323 -16.649 1 59.14 ? C2 DMS 708 A 1 HETATM 5 H H11 DMS . . . I 3 -24.9 -14.672 -17.866 1 67.97 ? H11 DMS 708 A 1 HETATM 6 H H12 DMS . . . I 3 -25.096 -15.847 -16.612 1 67.97 ? H12 DMS 708 A 1 HETATM 7 H H13 DMS . . . I 3 -24.177 -16.234 -18.024 1 67.97 ? H13 DMS 708 A 1 HETATM 8 H H21 DMS . . . I 3 -20.884 -16.07 -16.365 1 70.97 ? H21 DMS 708 A 1 HETATM 9 H H22 DMS . . . I 3 -21.872 -16.681 -17.645 1 70.97 ? H22 DMS 708 A 1 HETATM 10 H H23 DMS . . . I 3 -22.242 -17.077 -16.003 1 70.97 ? H23 DMS 708 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 19 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 748 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #