data_6ZF5
#
_model_server_result.job_id            8_TJZL5WrIIi3SCaLM0OCw 
_model_server_result.datetime_utc      '2025-01-10 23:11:04' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zf5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":715}' 
#
_entry.id    6ZF5 
#
_exptl.entry_id    6ZF5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              78.133 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'DIMETHYL SULFOXIDE' 
_entity.pdbx_number_of_molecules    15 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6ZF5 
_cell.length_a            103.189 
_cell.length_b            103.189 
_cell.length_c            54.917 
_cell.Z_PDB               6 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZF5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        169 
_symmetry.space_group_name_Hall    'P 61' 
_symmetry.space_group_name_H-M     'P 61' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 E N N 
? 3 F N N 
? 3 G N N 
? 3 H N N 
? 3 I N N 
? 3 J N N 
? 3 K N N 
? 3 L N N 
? 3 M N N 
? 3 N N N 
? 3 O N N 
? 3 P N N 
? 3 Q N N 
? 3 R N N 
#
_chem_comp.formula           'C2 H6 O S' 
_chem_comp.formula_weight    78.133 
_chem_comp.id                DMS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'DIMETHYL SULFOXIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
S O DMS doub 83 n n 
S C1 DMS sing 84 n n 
S C2 DMS sing 85 n n 
C1 H11 DMS sing 86 n n 
C1 H12 DMS sing 87 n n 
C1 H13 DMS sing 88 n n 
C2 H21 DMS sing 89 n n 
C2 H22 DMS sing 90 n n 
C2 H23 DMS sing 91 n n 
#
_atom_sites.entry_id                     6ZF5 
_atom_sites.fract_transf_matrix[1][1]    0.009691 
_atom_sites.fract_transf_matrix[1][2]    0.005595 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.01119 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.018209 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 SO4 A 1 701 701 SO4 SO4 . 
C 2 SO4 A 1 702 702 SO4 SO4 . 
D 3 DMS A 1 703 703 DMS DMS . 
E 3 DMS A 1 704 704 DMS DMS . 
F 3 DMS A 1 705 705 DMS DMS . 
G 3 DMS A 1 706 706 DMS DMS . 
H 3 DMS A 1 707 707 DMS DMS . 
I 3 DMS A 1 708 708 DMS DMS . 
J 3 DMS A 1 709 709 DMS DMS . 
K 3 DMS A 1 710 710 DMS DMS . 
L 3 DMS A 1 711 711 DMS DMS . 
M 3 DMS A 1 712 712 DMS DMS . 
N 3 DMS A 1 713 713 DMS DMS . 
O 3 DMS A 1 714 714 DMS DMS . 
P 3 DMS A 1 715 715 DMS DMS . 
Q 3 DMS A 1 716 716 DMS DMS . 
R 3 DMS A 1 717 717 DMS DMS . 
S 4 QH8 A 1 718 1001 QH8 QH8 . 
T 5 HOH A 1 801 801 HOH HOH . 
T 5 HOH A 2 802 804 HOH HOH . 
T 5 HOH A 3 803 802 HOH HOH . 
T 5 HOH A 4 804 803 HOH HOH . 
T 5 HOH A 5 805 807 HOH HOH . 
T 5 HOH A 6 806 805 HOH HOH . 
T 5 HOH A 7 807 806 HOH HOH . 
T 5 HOH A 8 808 812 HOH HOH . 
T 5 HOH A 9 809 810 HOH HOH . 
T 5 HOH A 10 810 815 HOH HOH . 
T 5 HOH A 11 811 819 HOH HOH . 
T 5 HOH A 12 812 834 HOH HOH . 
T 5 HOH A 13 813 822 HOH HOH . 
T 5 HOH A 14 814 817 HOH HOH . 
T 5 HOH A 15 815 820 HOH HOH . 
T 5 HOH A 16 816 839 HOH HOH . 
T 5 HOH A 17 817 816 HOH HOH . 
T 5 HOH A 18 818 823 HOH HOH . 
T 5 HOH A 19 819 809 HOH HOH . 
T 5 HOH A 20 820 811 HOH HOH . 
T 5 HOH A 21 821 808 HOH HOH . 
T 5 HOH A 22 822 824 HOH HOH . 
T 5 HOH A 23 823 847 HOH HOH . 
T 5 HOH A 24 824 821 HOH HOH . 
T 5 HOH A 25 825 830 HOH HOH . 
T 5 HOH A 26 826 844 HOH HOH . 
T 5 HOH A 27 827 829 HOH HOH . 
T 5 HOH A 28 828 833 HOH HOH . 
T 5 HOH A 29 829 828 HOH HOH . 
T 5 HOH A 30 830 832 HOH HOH . 
T 5 HOH A 31 831 840 HOH HOH . 
T 5 HOH A 32 832 827 HOH HOH . 
T 5 HOH A 33 833 826 HOH HOH . 
T 5 HOH A 34 834 837 HOH HOH . 
T 5 HOH A 35 835 879 HOH HOH . 
T 5 HOH A 36 836 835 HOH HOH . 
T 5 HOH A 37 837 855 HOH HOH . 
T 5 HOH A 38 838 814 HOH HOH . 
T 5 HOH A 39 839 825 HOH HOH . 
T 5 HOH A 40 840 841 HOH HOH . 
T 5 HOH A 41 841 838 HOH HOH . 
T 5 HOH A 42 842 869 HOH HOH . 
T 5 HOH A 43 843 845 HOH HOH . 
T 5 HOH A 44 844 831 HOH HOH . 
T 5 HOH A 45 845 843 HOH HOH . 
T 5 HOH A 46 846 818 HOH HOH . 
T 5 HOH A 47 847 842 HOH HOH . 
T 5 HOH A 48 848 857 HOH HOH . 
T 5 HOH A 49 849 846 HOH HOH . 
T 5 HOH A 50 850 848 HOH HOH . 
T 5 HOH A 51 851 868 HOH HOH . 
T 5 HOH A 52 852 867 HOH HOH . 
T 5 HOH A 53 853 854 HOH HOH . 
T 5 HOH A 54 854 852 HOH HOH . 
T 5 HOH A 55 855 849 HOH HOH . 
T 5 HOH A 56 856 891 HOH HOH . 
T 5 HOH A 57 857 859 HOH HOH . 
T 5 HOH A 58 858 853 HOH HOH . 
T 5 HOH A 59 859 865 HOH HOH . 
T 5 HOH A 60 860 861 HOH HOH . 
T 5 HOH A 61 861 864 HOH HOH . 
T 5 HOH A 62 862 813 HOH HOH . 
T 5 HOH A 63 863 860 HOH HOH . 
T 5 HOH A 64 864 836 HOH HOH . 
T 5 HOH A 65 865 856 HOH HOH . 
T 5 HOH A 66 866 880 HOH HOH . 
T 5 HOH A 67 867 863 HOH HOH . 
T 5 HOH A 68 868 882 HOH HOH . 
T 5 HOH A 69 869 874 HOH HOH . 
T 5 HOH A 70 870 876 HOH HOH . 
T 5 HOH A 71 871 866 HOH HOH . 
T 5 HOH A 72 872 858 HOH HOH . 
T 5 HOH A 73 873 850 HOH HOH . 
T 5 HOH A 74 874 862 HOH HOH . 
T 5 HOH A 75 875 872 HOH HOH . 
T 5 HOH A 76 876 875 HOH HOH . 
T 5 HOH A 77 877 871 HOH HOH . 
T 5 HOH A 78 878 886 HOH HOH . 
T 5 HOH A 79 879 873 HOH HOH . 
T 5 HOH A 80 880 877 HOH HOH . 
T 5 HOH A 81 881 884 HOH HOH . 
T 5 HOH A 82 882 870 HOH HOH . 
T 5 HOH A 83 883 885 HOH HOH . 
T 5 HOH A 84 884 881 HOH HOH . 
T 5 HOH A 85 885 883 HOH HOH . 
T 5 HOH A 86 886 851 HOH HOH . 
T 5 HOH A 87 887 899 HOH HOH . 
T 5 HOH A 88 888 887 HOH HOH . 
T 5 HOH A 89 889 878 HOH HOH . 
T 5 HOH A 90 890 889 HOH HOH . 
T 5 HOH A 91 891 900 HOH HOH . 
T 5 HOH A 92 892 893 HOH HOH . 
T 5 HOH A 93 893 888 HOH HOH . 
T 5 HOH A 94 894 890 HOH HOH . 
T 5 HOH A 95 895 896 HOH HOH . 
T 5 HOH A 96 896 892 HOH HOH . 
T 5 HOH A 97 897 895 HOH HOH . 
T 5 HOH A 98 898 901 HOH HOH . 
T 5 HOH A 99 899 897 HOH HOH . 
T 5 HOH A 100 900 911 HOH HOH . 
T 5 HOH A 101 901 907 HOH HOH . 
T 5 HOH A 102 902 902 HOH HOH . 
T 5 HOH A 103 903 898 HOH HOH . 
T 5 HOH A 104 904 917 HOH HOH . 
T 5 HOH A 105 905 915 HOH HOH . 
T 5 HOH A 106 906 912 HOH HOH . 
T 5 HOH A 107 907 909 HOH HOH . 
T 5 HOH A 108 908 905 HOH HOH . 
T 5 HOH A 109 909 908 HOH HOH . 
T 5 HOH A 110 910 910 HOH HOH . 
T 5 HOH A 111 911 894 HOH HOH . 
T 5 HOH A 112 912 904 HOH HOH . 
T 5 HOH A 113 913 906 HOH HOH . 
T 5 HOH A 114 914 916 HOH HOH . 
T 5 HOH A 115 915 927 HOH HOH . 
T 5 HOH A 116 916 924 HOH HOH . 
T 5 HOH A 117 917 918 HOH HOH . 
T 5 HOH A 118 918 929 HOH HOH . 
T 5 HOH A 119 919 922 HOH HOH . 
T 5 HOH A 120 920 930 HOH HOH . 
T 5 HOH A 121 921 913 HOH HOH . 
T 5 HOH A 122 922 931 HOH HOH . 
T 5 HOH A 123 923 914 HOH HOH . 
T 5 HOH A 124 924 933 HOH HOH . 
T 5 HOH A 125 925 934 HOH HOH . 
T 5 HOH A 126 926 903 HOH HOH . 
T 5 HOH A 127 927 932 HOH HOH . 
T 5 HOH A 128 928 920 HOH HOH . 
T 5 HOH A 129 929 935 HOH HOH . 
T 5 HOH A 130 930 939 HOH HOH . 
T 5 HOH A 131 931 926 HOH HOH . 
T 5 HOH A 132 932 925 HOH HOH . 
T 5 HOH A 133 933 945 HOH HOH . 
T 5 HOH A 134 934 923 HOH HOH . 
T 5 HOH A 135 935 944 HOH HOH . 
T 5 HOH A 136 936 919 HOH HOH . 
T 5 HOH A 137 937 928 HOH HOH . 
T 5 HOH A 138 938 936 HOH HOH . 
T 5 HOH A 139 939 938 HOH HOH . 
T 5 HOH A 140 940 937 HOH HOH . 
T 5 HOH A 141 941 941 HOH HOH . 
T 5 HOH A 142 942 946 HOH HOH . 
T 5 HOH A 143 943 940 HOH HOH . 
T 5 HOH A 144 944 947 HOH HOH . 
T 5 HOH A 145 945 942 HOH HOH . 
T 5 HOH A 146 946 921 HOH HOH . 
T 5 HOH A 147 947 948 HOH HOH . 
T 5 HOH A 148 948 943 HOH HOH . 
T 5 HOH A 149 949 954 HOH HOH . 
T 5 HOH A 150 950 949 HOH HOH . 
T 5 HOH A 151 951 957 HOH HOH . 
T 5 HOH A 152 952 956 HOH HOH . 
T 5 HOH A 153 953 953 HOH HOH . 
T 5 HOH A 154 954 951 HOH HOH . 
T 5 HOH A 155 955 955 HOH HOH . 
T 5 HOH A 156 956 960 HOH HOH . 
T 5 HOH A 157 957 950 HOH HOH . 
T 5 HOH A 158 958 959 HOH HOH . 
T 5 HOH A 159 959 958 HOH HOH . 
T 5 HOH A 160 960 961 HOH HOH . 
T 5 HOH A 161 961 952 HOH HOH . 
T 5 HOH A 162 962 962 HOH HOH . 
T 5 HOH A 163 963 964 HOH HOH . 
T 5 HOH A 164 964 963 HOH HOH . 
T 5 HOH A 165 965 965 HOH HOH . 
T 5 HOH A 166 966 966 HOH HOH . 
T 5 HOH A 167 967 967 HOH HOH . 
T 5 HOH A 168 968 968 HOH HOH . 
T 5 HOH A 169 969 969 HOH HOH . 
T 5 HOH A 170 970 970 HOH HOH . 
T 5 HOH A 171 971 972 HOH HOH . 
T 5 HOH A 172 972 973 HOH HOH . 
T 5 HOH A 173 973 971 HOH HOH . 
T 5 HOH A 174 974 975 HOH HOH . 
T 5 HOH A 175 975 974 HOH HOH . 
T 5 HOH A 176 976 976 HOH HOH . 
T 5 HOH A 177 977 977 HOH HOH . 
T 5 HOH A 178 978 978 HOH HOH . 
T 5 HOH A 179 979 980 HOH HOH . 
T 5 HOH A 180 980 979 HOH HOH . 
T 5 HOH A 181 981 981 HOH HOH . 
T 5 HOH A 182 982 982 HOH HOH . 
T 5 HOH A 183 983 983 HOH HOH . 
T 5 HOH A 184 984 984 HOH HOH . 
T 5 HOH A 185 985 985 HOH HOH . 
T 5 HOH A 186 986 988 HOH HOH . 
T 5 HOH A 187 987 986 HOH HOH . 
T 5 HOH A 188 988 987 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 S S DMS . . . P 3 -25.399 1.678 -7.391 1 47.78 ? S DMS 715 A 1 
HETATM 2 O O DMS . . . P 3 -25.451 0.228 -7.038 1 46.63 ? O DMS 715 A 1 
HETATM 3 C C1 DMS . . . P 3 -25.951 2.717 -6.019 1 48.7 ? C1 DMS 715 A 1 
HETATM 4 C C2 DMS . . . P 3 -23.656 2.178 -7.413 1 48.04 ? C2 DMS 715 A 1 
HETATM 5 H H11 DMS . . . P 3 -26.267 2.103 -5.216 1 58.46 ? H11 DMS 715 A 1 
HETATM 6 H H12 DMS . . . P 3 -26.758 3.324 -6.337 1 58.46 ? H12 DMS 715 A 1 
HETATM 7 H H13 DMS . . . P 3 -25.152 3.333 -5.697 1 58.46 ? H13 DMS 715 A 1 
HETATM 8 H H21 DMS . . . P 3 -23.193 1.808 -8.29 1 57.66 ? H21 DMS 715 A 1 
HETATM 9 H H22 DMS . . . P 3 -23.165 1.783 -6.562 1 57.66 ? H22 DMS 715 A 1 
HETATM 10 H H23 DMS . . . P 3 -23.591 3.235 -7.399 1 57.66 ? H23 DMS 715 A 1 
#
_model_server_stats.io_time_ms              30 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    13 
_model_server_stats.query_time_ms           488 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           10 
#