data_6ZFS # _model_server_result.job_id aELfvfWn4wILS5YLoyqj_Q _model_server_result.datetime_utc '2024-11-18 14:32:27' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zfs # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":407}' # _entry.id 6ZFS # _exptl.entry_id 6ZFS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 409.4 _entity.id 18 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 2-methyl-3-[4-[[4-(trifluoromethyloxy)phenyl]methyl]phenyl]-3~{H}-quinolin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ZFS _cell.length_a 209.56 _cell.length_b 209.56 _cell.length_c 343.348 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZFS _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 18 _struct_asym.id T _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf2 H SG CYS 11 H CYS 24 1_555 H SG CYS 55 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf3 H SG CYS 27 H CYS 40 1_555 H SG CYS 41 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc1 C NE2 HIS 82 C HIS 83 1_555 N FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.166 ? metalc ? metalc2 C NE2 HIS 96 C HIS 97 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.191 ? metalc ? metalc3 C NE2 HIS 181 C HIS 182 1_555 N FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.185 ? metalc ? metalc4 C NE2 HIS 195 C HIS 196 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc5 D NE2 HIS 40 D HIS 41 1_555 U FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? metalc ? metalc6 D SD MET 159 D MET 160 1_555 U FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.363 ? metalc ? metalc7 E SG CYS 158 E CYS 158 1_555 X FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? # _chem_comp.formula 'C24 H18 F3 N O2' _chem_comp.formula_weight 409.4 _chem_comp.id JGW _chem_comp.mon_nstd_flag . _chem_comp.name 2-methyl-3-[4-[[4-(trifluoromethyloxy)phenyl]methyl]phenyl]-3~{H}-quinolin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C15 C16 JGW sing 657 n n C15 C12 JGW sing 658 n n C16 C17 JGW doub 659 n y C16 C21 JGW sing 660 n y C17 C18 JGW sing 661 n y C13 C12 JGW doub 662 n y C13 C14 JGW sing 663 n y C21 C20 JGW doub 664 n y C18 C19 JGW doub 665 n y C12 C11 JGW sing 666 n y C20 C19 JGW sing 667 n y C19 O1 JGW sing 668 n n C14 C9 JGW doub 669 n y O1 C22 JGW sing 670 n n C11 C10 JGW doub 671 n y F1 C22 JGW sing 672 n n C22 F JGW sing 673 n n C22 F2 JGW sing 674 n n C9 C10 JGW sing 675 n y C9 C8 JGW sing 676 n n C23 C7 JGW sing 677 n n C8 C7 JGW sing 678 n n C8 C6 JGW sing 679 n n C7 N JGW doub 680 n n O C6 JGW doub 681 n n C6 C5 JGW sing 682 n n N C4 JGW sing 683 n n C5 C4 JGW doub 684 n y C5 C JGW sing 685 n y C4 C3 JGW sing 686 n y C C1 JGW doub 687 n y C3 C2 JGW doub 688 n y C1 C2 JGW sing 689 n y C2 H1 JGW sing 690 n n C1 H2 JGW sing 691 n n C15 H3 JGW sing 692 n n C15 H4 JGW sing 693 n n C20 H5 JGW sing 694 n n C21 H6 JGW sing 695 n n C18 H7 JGW sing 696 n n C17 H8 JGW sing 697 n n C11 H9 JGW sing 698 n n C10 H10 JGW sing 699 n n C13 H11 JGW sing 700 n n C14 H12 JGW sing 701 n n C8 H13 JGW sing 702 n n C H14 JGW sing 703 n n C23 H15 JGW sing 704 n n C23 H16 JGW sing 705 n n C23 H17 JGW sing 706 n n C3 H18 JGW sing 707 n n # _atom_sites.entry_id 6ZFS _atom_sites.fract_transf_matrix[1][1] 0.004772 _atom_sites.fract_transf_matrix[1][2] 0.002755 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002912 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 11 6PE A 1 501 502 6PE 6PE . L 12 PO4 A 1 502 501 PO4 PO4 . M 13 CDL A 1 503 401 CDL CDL . N 14 HEM C 1 401 402 HEM HEM . O 14 HEM C 1 402 403 HEM HEM . P 15 LMT C 1 403 405 LMT LMT . Q 16 PG4 C 1 404 407 PG4 PG4 . R 13 CDL C 1 405 408 CDL CDL . S 17 PEE C 1 406 409 PEE PEE . T 18 JGW C 1 407 404 JGW 1U4 . U 19 HEC D 1 501 501 HEC HEC . V 12 PO4 D 1 502 502 PO4 PO4 . W 13 CDL D 1 503 503 CDL CDL . X 20 FES E 1 201 201 FES FES . Y 21 PX4 E 1 202 202 PX4 PX4 . Z 12 PO4 E 1 203 203 PO4 PO4 . AA 17 PEE E 1 204 204 PEE PEE . BA 13 CDL E 1 205 205 CDL CDL . CA 12 PO4 F 1 501 501 PO4 PO4 . DA 13 CDL G 1 101 504 CDL CDL . EA 12 PO4 G 1 102 101 PO4 PO4 . FA 12 PO4 G 1 103 102 PO4 PO4 . GA 12 PO4 G 1 104 103 PO4 PO4 . HA 22 HOH A 1 601 505 HOH HOH . HA 22 HOH A 2 602 509 HOH HOH . HA 22 HOH A 3 603 504 HOH HOH . HA 22 HOH A 4 604 510 HOH HOH . HA 22 HOH A 5 605 508 HOH HOH . HA 22 HOH A 6 606 505 HOH HOH . HA 22 HOH A 7 607 507 HOH HOH . HA 22 HOH A 8 608 211 HOH HOH . HA 22 HOH A 9 609 503 HOH HOH . HA 22 HOH A 10 610 506 HOH HOH . IA 22 HOH B 1 501 503 HOH HOH . IA 22 HOH B 2 502 502 HOH HOH . IA 22 HOH B 3 503 504 HOH HOH . IA 22 HOH B 4 504 505 HOH HOH . IA 22 HOH B 5 505 501 HOH HOH . JA 22 HOH C 1 501 412 HOH HOH . JA 22 HOH C 2 502 413 HOH HOH . JA 22 HOH C 3 503 416 HOH HOH . JA 22 HOH C 4 504 417 HOH HOH . JA 22 HOH C 5 505 411 HOH HOH . JA 22 HOH C 6 506 414 HOH HOH . JA 22 HOH C 7 507 415 HOH HOH . JA 22 HOH C 8 508 410 HOH HOH . KA 22 HOH D 1 601 507 HOH HOH . KA 22 HOH D 2 602 207 HOH HOH . KA 22 HOH D 3 603 506 HOH HOH . LA 22 HOH E 1 301 210 HOH HOH . LA 22 HOH E 2 302 208 HOH HOH . LA 22 HOH E 3 303 206 HOH HOH . LA 22 HOH E 4 304 209 HOH HOH . MA 22 HOH F 1 601 503 HOH HOH . MA 22 HOH F 2 602 502 HOH HOH . MA 22 HOH F 3 603 506 HOH HOH . MA 22 HOH F 4 604 504 HOH HOH . NA 22 HOH G 1 201 104 HOH HOH . OA 22 HOH J 1 101 61 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C9 JGW . . . T 18 -67.242 -64.22 29.67 1 125.6 ? C9 JGW 407 C 1 HETATM 2 C C7 JGW . . . T 18 -69.511 -64.058 31.01 1 113.36 ? C7 JGW 407 C 1 HETATM 3 C C6 JGW . . . T 18 -67.696 -62.266 31.285 1 117.4 ? C6 JGW 407 C 1 HETATM 4 C C4 JGW . . . T 18 -69.953 -62.249 32.487 1 118.65 ? C4 JGW 407 C 1 HETATM 5 C C2 JGW . . . T 18 -70.439 -60.431 33.992 1 117.74 ? C2 JGW 407 C 1 HETATM 6 C C1 JGW . . . T 18 -69.195 -59.836 33.749 1 118.02 ? C1 JGW 407 C 1 HETATM 7 C C12 JGW . . . T 18 -65.557 -65.458 27.759 1 140.61 ? C12 JGW 407 C 1 HETATM 8 C C15 JGW . . . T 18 -64.654 -66.165 26.744 1 145.01 ? C15 JGW 407 C 1 HETATM 9 C C16 JGW . . . T 18 -64.681 -67.627 27.149 1 155.31 ? C16 JGW 407 C 1 HETATM 10 C C19 JGW . . . T 18 -64.856 -70.3 27.979 1 177.36 ? C19 JGW 407 C 1 HETATM 11 C C20 JGW . . . T 18 -63.608 -69.658 27.894 1 167.79 ? C20 JGW 407 C 1 HETATM 12 C C21 JGW . . . T 18 -63.51 -68.323 27.484 1 158.25 ? C21 JGW 407 C 1 HETATM 13 C C22 JGW . . . T 18 -65.684 -71.997 29.587 1 186.22 ? C22 JGW 407 C 1 HETATM 14 F F2 JGW . . . T 18 -65.694 -71.034 30.498 1 176.16 ? F2 JGW 407 C 1 HETATM 15 F F JGW . . . T 18 -65.123 -73.067 30.117 1 186.03 ? F JGW 407 C 1 HETATM 16 F F1 JGW . . . T 18 -66.937 -72.285 29.284 1 190.79 ? F1 JGW 407 C 1 HETATM 17 O O1 JGW . . . T 18 -64.964 -71.616 28.39 1 185.06 ? O1 JGW 407 C 1 HETATM 18 C C18 JGW . . . T 18 -66.016 -69.591 27.653 1 177.01 ? C18 JGW 407 C 1 HETATM 19 C C17 JGW . . . T 18 -65.927 -68.264 27.239 1 165.55 ? C17 JGW 407 C 1 HETATM 20 C C11 JGW . . . T 18 -65.524 -65.81 29.127 1 138.71 ? C11 JGW 407 C 1 HETATM 21 C C10 JGW . . . T 18 -66.351 -65.207 30.079 1 131.35 ? C10 JGW 407 C 1 HETATM 22 C C13 JGW . . . T 18 -66.454 -64.469 27.353 1 137.65 ? C13 JGW 407 C 1 HETATM 23 C C14 JGW . . . T 18 -67.283 -63.856 28.311 1 133.31 ? C14 JGW 407 C 1 HETATM 24 C C8 JGW . . . T 18 -68.144 -63.535 30.647 1 117.82 ? C8 JGW 407 C 1 HETATM 25 O O JGW . . . T 18 -66.587 -61.749 31.048 1 117.4 ? O JGW 407 C 1 HETATM 26 C C5 JGW . . . T 18 -68.625 -61.601 32.228 1 118.19 ? C5 JGW 407 C 1 HETATM 27 C C JGW . . . T 18 -68.28 -60.405 32.864 1 116.21 ? C JGW 407 C 1 HETATM 28 C C23 JGW . . . T 18 -70.074 -65.329 30.432 1 111.12 ? C23 JGW 407 C 1 HETATM 29 N N JGW . . . T 18 -70.3 -63.401 31.881 1 114.81 ? N JGW 407 C 1 HETATM 30 C C3 JGW . . . T 18 -70.828 -61.628 33.38 1 119.39 ? C3 JGW 407 C 1 # _model_server_stats.io_time_ms 33 _model_server_stats.parse_time_ms 37 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 30 #