data_6ZFT
#
_model_server_result.job_id            bO7-jkR4dBB419i8F74h6Q 
_model_server_result.datetime_utc      '2024-11-27 16:01:55' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zft 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"BA","auth_seq_id":202}' 
#
_entry.id    6ZFT 
#
_exptl.entry_id    6ZFT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              678.94 
_entity.id                          21 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6ZFT 
_cell.length_a            212.36 
_cell.length_b            212.36 
_cell.length_c            345.914 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZFT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      21 
_struct_asym.id                             BA 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 H SG CYS 12 H CYS 24 1_555 H SG CYS 56 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf3 H SG CYS 28 H CYS 40 1_555 H SG CYS 42 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc1 C NE2 HIS 82 C HIS 83 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc2 C NE2 HIS 96 C HIS 97 1_555 P FE HEM . C HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
metalc ? metalc3 C NE2 HIS 181 C HIS 182 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc4 C NE2 HIS 195 C HIS 196 1_555 P FE HEM . C HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc5 D NE2 HIS 40 D HIS 41 1_555 X FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc6 D SD MET 159 D MET 160 1_555 X FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc7 E ND1 HIS 141 E HIS 141 1_555 AA FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? 
metalc ? metalc8 E SG CYS 158 E CYS 158 1_555 AA FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
#
_chem_comp.formula           'C36 H73 N O8 P 1' 
_chem_comp.formula_weight    678.94 
_chem_comp.id                PX4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-DIMYRISTOYL-SN-GLYCERO-3-PHOSPHOCHOLINE 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O1 P1 PX4 sing 1056 n n 
O1 H1P PX4 sing 1057 n n 
O2 P1 PX4 doub 1058 n n 
P1 O3 PX4 sing 1059 n n 
P1 O4 PX4 sing 1060 n n 
O3 C1 PX4 sing 1061 n n 
C1 C2 PX4 sing 1062 n n 
C1 H1 PX4 sing 1063 n n 
C1 H2 PX4 sing 1064 n n 
C2 N1 PX4 sing 1065 n n 
C2 H3 PX4 sing 1066 n n 
C2 H4 PX4 sing 1067 n n 
N1 C3 PX4 sing 1068 n n 
N1 C4 PX4 sing 1069 n n 
N1 C5 PX4 sing 1070 n n 
C3 H5 PX4 sing 1071 n n 
C3 H6 PX4 sing 1072 n n 
C3 H7 PX4 sing 1073 n n 
C4 H8 PX4 sing 1074 n n 
C4 H9 PX4 sing 1075 n n 
C4 H10 PX4 sing 1076 n n 
C5 H11 PX4 sing 1077 n n 
C5 H12 PX4 sing 1078 n n 
C5 H13 PX4 sing 1079 n n 
O4 C6 PX4 sing 1080 n n 
C6 C7 PX4 sing 1081 n n 
C6 H14 PX4 sing 1082 n n 
C6 H15 PX4 sing 1083 n n 
C7 C8 PX4 sing 1084 n n 
C7 O7 PX4 sing 1085 n n 
C7 H16 PX4 sing 1086 n n 
C8 O5 PX4 sing 1087 n n 
C8 H17 PX4 sing 1088 n n 
C8 H18 PX4 sing 1089 n n 
O5 C9 PX4 sing 1090 n n 
C9 O6 PX4 doub 1091 n n 
C9 C10 PX4 sing 1092 n n 
C10 C11 PX4 sing 1093 n n 
C10 H19 PX4 sing 1094 n n 
C10 H20 PX4 sing 1095 n n 
C11 C12 PX4 sing 1096 n n 
C11 H21 PX4 sing 1097 n n 
C11 H22 PX4 sing 1098 n n 
C12 C13 PX4 sing 1099 n n 
C12 H23 PX4 sing 1100 n n 
C12 H24 PX4 sing 1101 n n 
C13 C14 PX4 sing 1102 n n 
C13 H25 PX4 sing 1103 n n 
C13 H26 PX4 sing 1104 n n 
C14 C15 PX4 sing 1105 n n 
C14 H27 PX4 sing 1106 n n 
C14 H28 PX4 sing 1107 n n 
C15 C16 PX4 sing 1108 n n 
C15 H29 PX4 sing 1109 n n 
C15 H30 PX4 sing 1110 n n 
C16 C17 PX4 sing 1111 n n 
C16 H31 PX4 sing 1112 n n 
C16 H32 PX4 sing 1113 n n 
C17 C18 PX4 sing 1114 n n 
C17 H33 PX4 sing 1115 n n 
C17 H34 PX4 sing 1116 n n 
C18 C19 PX4 sing 1117 n n 
C18 H35 PX4 sing 1118 n n 
C18 H36 PX4 sing 1119 n n 
C19 C20 PX4 sing 1120 n n 
C19 H37 PX4 sing 1121 n n 
C19 H38 PX4 sing 1122 n n 
C20 C21 PX4 sing 1123 n n 
C20 H39 PX4 sing 1124 n n 
C20 H40 PX4 sing 1125 n n 
C21 C22 PX4 sing 1126 n n 
C21 H41 PX4 sing 1127 n n 
C21 H42 PX4 sing 1128 n n 
C22 H43 PX4 sing 1129 n n 
C22 H44 PX4 sing 1130 n n 
C22 H45 PX4 sing 1131 n n 
O7 C23 PX4 sing 1132 n n 
C23 O8 PX4 doub 1133 n n 
C23 C24 PX4 sing 1134 n n 
C24 C25 PX4 sing 1135 n n 
C24 H46 PX4 sing 1136 n n 
C24 H47 PX4 sing 1137 n n 
C25 C26 PX4 sing 1138 n n 
C25 H48 PX4 sing 1139 n n 
C25 H49 PX4 sing 1140 n n 
C26 C27 PX4 sing 1141 n n 
C26 H50 PX4 sing 1142 n n 
C26 H51 PX4 sing 1143 n n 
C27 C28 PX4 sing 1144 n n 
C27 H52 PX4 sing 1145 n n 
C27 H53 PX4 sing 1146 n n 
C28 C29 PX4 sing 1147 n n 
C28 H54 PX4 sing 1148 n n 
C28 H55 PX4 sing 1149 n n 
C29 C30 PX4 sing 1150 n n 
C29 H56 PX4 sing 1151 n n 
C29 H57 PX4 sing 1152 n n 
C30 C31 PX4 sing 1153 n n 
C30 H58 PX4 sing 1154 n n 
C30 H59 PX4 sing 1155 n n 
C31 C32 PX4 sing 1156 n n 
C31 H60 PX4 sing 1157 n n 
C31 H61 PX4 sing 1158 n n 
C32 C33 PX4 sing 1159 n n 
C32 H62 PX4 sing 1160 n n 
C32 H63 PX4 sing 1161 n n 
C33 C34 PX4 sing 1162 n n 
C33 H64 PX4 sing 1163 n n 
C33 H65 PX4 sing 1164 n n 
C34 C35 PX4 sing 1165 n n 
C34 H66 PX4 sing 1166 n n 
C34 H67 PX4 sing 1167 n n 
C35 C36 PX4 sing 1168 n n 
C35 H68 PX4 sing 1169 n n 
C35 H69 PX4 sing 1170 n n 
C36 H70 PX4 sing 1171 n n 
C36 H71 PX4 sing 1172 n n 
C36 H72 PX4 sing 1173 n n 
#
_atom_sites.entry_id                     6ZFT 
_atom_sites.fract_transf_matrix[1][1]    0.004709 
_atom_sites.fract_transf_matrix[1][2]    0.002719 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005437 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002891 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 11 PG4 A 1 501 501 PG4 PG4 . 
L 12 6PE A 1 502 502 6PE 6PE . 
M 11 PG4 A 1 503 601 PG4 PG4 . 
N 13 CDL C 1 401 401 CDL CDL . 
O 14 HEM C 1 402 402 HEM HEM . 
P 14 HEM C 1 403 403 HEM HEM . 
Q 15 JHB C 1 404 404 JHB CK2 . 
R 16 LMT C 1 405 405 LMT LMT . 
S 11 PG4 C 1 406 406 PG4 PG4 . 
T 11 PG4 C 1 407 407 PG4 PG4 . 
U 13 CDL C 1 408 408 CDL CDL . 
V 17 PEE C 1 409 409 PEE PEE . 
W 18 PO4 C 1 410 410 PO4 PO4 . 
X 19 HEC D 1 501 501 HEC HEC . 
Y 13 CDL D 1 502 503 CDL CDL . 
Z 17 PEE D 1 503 204 PEE PEE . 
AA 20 FES E 1 201 201 FES FES . 
BA 21 PX4 E 1 202 202 PX4 PX4 . 
CA 13 CDL E 1 203 205 CDL CDL . 
DA 18 PO4 F 1 501 501 PO4 PO4 . 
EA 18 PO4 G 1 101 101 PO4 PO4 . 
FA 18 PO4 G 1 102 102 PO4 PO4 . 
GA 18 PO4 G 1 103 103 PO4 PO4 . 
HA 18 PO4 H 1 101 101 PO4 PO4 . 
IA 22 HOH A 1 601 505 HOH HOH . 
IA 22 HOH A 2 602 507 HOH HOH . 
IA 22 HOH A 3 603 506 HOH HOH . 
JA 22 HOH B 1 501 504 HOH HOH . 
KA 22 HOH C 1 501 411 HOH HOH . 
KA 22 HOH C 2 502 412 HOH HOH . 
KA 22 HOH C 3 503 414 HOH HOH . 
KA 22 HOH C 4 504 413 HOH HOH . 
LA 22 HOH D 1 601 504 HOH HOH . 
LA 22 HOH D 2 602 505 HOH HOH . 
MA 22 HOH F 1 601 502 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 O O1 PX4 . . . BA 21 -67.608 -53.708 13.818 1 134.25 -1 O1 PX4 202 E 1 
HETATM 2 O O2 PX4 . . . BA 21 -65.675 -52.483 12.593 1 131.02 ? O2 PX4 202 E 1 
HETATM 3 P P1 PX4 . . . BA 21 -66.631 -53.642 12.679 1 133.32 ? P1 PX4 202 E 1 
HETATM 4 O O3 PX4 . . . BA 21 -67.472 -53.805 11.322 1 132.42 ? O3 PX4 202 E 1 
HETATM 5 C C1 PX4 . . . BA 21 -67.021 -53.195 10.081 1 131.94 ? C1 PX4 202 E 1 
HETATM 6 C C2 PX4 . . . BA 21 -68.24 -52.877 9.247 1 132.2 ? C2 PX4 202 E 1 
HETATM 7 N N1 PX4 . . . BA 21 -68.022 -52.344 7.841 1 132.48 ? N1 PX4 202 E 1 
HETATM 8 C C3 PX4 . . . BA 21 -69.317 -52.338 7.103 1 133.14 ? C3 PX4 202 E 1 
HETATM 9 C C4 PX4 . . . BA 21 -67.508 -50.953 7.895 1 132.28 ? C4 PX4 202 E 1 
HETATM 10 C C5 PX4 . . . BA 21 -67.055 -53.198 7.094 1 133.34 ? C5 PX4 202 E 1 
HETATM 11 O O4 PX4 . . . BA 21 -65.803 -55.018 12.726 1 135.81 ? O4 PX4 202 E 1 
HETATM 12 C C6 PX4 . . . BA 21 -66.415 -56.242 13.243 1 137.39 ? C6 PX4 202 E 1 
HETATM 13 C C7 PX4 . . . BA 21 -65.378 -57.346 13.34 1 140.27 ? C7 PX4 202 E 1 
HETATM 14 C C8 PX4 . . . BA 21 -64.766 -57.715 12.005 1 142.95 ? C8 PX4 202 E 1 
HETATM 15 O O5 PX4 . . . BA 21 -65.746 -58.386 11.18 1 143.98 ? O5 PX4 202 E 1 
HETATM 16 C C9 PX4 . . . BA 21 -65.427 -58.534 9.892 1 141.51 ? C9 PX4 202 E 1 
HETATM 17 O O6 PX4 . . . BA 21 -65.716 -57.713 9.055 1 144.94 ? O6 PX4 202 E 1 
HETATM 18 C C10 PX4 . . . BA 21 -64.733 -59.865 9.625 1 136.76 ? C10 PX4 202 E 1 
HETATM 19 C C11 PX4 . . . BA 21 -63.288 -59.769 9.202 1 132.92 ? C11 PX4 202 E 1 
HETATM 20 C C12 PX4 . . . BA 21 -62.525 -61.079 9.418 1 130.5 ? C12 PX4 202 E 1 
HETATM 21 C C13 PX4 . . . BA 21 -61.424 -61.372 8.407 1 129.57 ? C13 PX4 202 E 1 
HETATM 22 C C14 PX4 . . . BA 21 -60.3 -62.27 8.92 1 128.97 ? C14 PX4 202 E 1 
HETATM 23 C C15 PX4 . . . BA 21 -60 -63.497 8.064 1 129.55 ? C15 PX4 202 E 1 
HETATM 24 C C16 PX4 . . . BA 21 -60.097 -64.854 8.787 1 129.73 ? C16 PX4 202 E 1 
HETATM 25 C C17 PX4 . . . BA 21 -61.195 -65.811 8.272 1 127.97 ? C17 PX4 202 E 1 
HETATM 26 C C18 PX4 . . . BA 21 -61.094 -67.262 8.761 1 125.28 ? C18 PX4 202 E 1 
HETATM 27 C C19 PX4 . . . BA 21 -60.96 -68.318 7.662 1 123.69 ? C19 PX4 202 E 1 
HETATM 28 C C20 PX4 . . . BA 21 -59.797 -69.295 7.825 1 121.82 ? C20 PX4 202 E 1 
HETATM 29 C C21 PX4 . . . BA 21 -58.87 -69.429 6.628 1 120.3 ? C21 PX4 202 E 1 
HETATM 30 C C22 PX4 . . . BA 21 -57.936 -70.619 6.702 1 119.43 ? C22 PX4 202 E 1 
HETATM 31 O O7 PX4 . . . BA 21 -64.261 -56.964 14.21 1 140.08 ? O7 PX4 202 E 1 
HETATM 32 C C23 PX4 . . . BA 21 -63.757 -57.878 15.069 1 135.76 ? C23 PX4 202 E 1 
HETATM 33 O O8 PX4 . . . BA 21 -64.445 -58.265 15.979 1 138.12 ? O8 PX4 202 E 1 
HETATM 34 C C24 PX4 . . . BA 21 -62.342 -58.403 14.805 1 130.91 ? C24 PX4 202 E 1 
HETATM 35 C C25 PX4 . . . BA 21 -61.25 -57.795 15.668 1 126.82 ? C25 PX4 202 E 1 
HETATM 36 C C26 PX4 . . . BA 21 -61.098 -58.454 17.037 1 123.79 ? C26 PX4 202 E 1 
HETATM 37 C C27 PX4 . . . BA 21 -59.915 -59.375 17.166 1 121.76 ? C27 PX4 202 E 1 
#
_model_server_stats.io_time_ms              49 
_model_server_stats.parse_time_ms           46 
_model_server_stats.create_model_time_ms    38 
_model_server_stats.query_time_ms           529 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           37 
#