data_6ZFT
#
_model_server_result.job_id            DYnG6n1sXTuufPrIVOGQpQ 
_model_server_result.datetime_utc      '2024-11-05 07:00:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zft 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"P","auth_seq_id":403}' 
#
_entry.id    6ZFT 
#
_exptl.entry_id    6ZFT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          14 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6ZFT 
_cell.length_a            212.36 
_cell.length_b            212.36 
_cell.length_c            345.914 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZFT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 14 O N N 
? 14 P N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 H SG CYS 12 H CYS 24 1_555 H SG CYS 56 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? 
disulf ? disulf3 H SG CYS 28 H CYS 40 1_555 H SG CYS 42 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? 
metalc ? metalc1 C NE2 HIS 82 C HIS 83 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.204 ? 
metalc ? metalc2 C NE2 HIS 96 C HIS 97 1_555 P FE HEM . C HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
metalc ? metalc3 C NE2 HIS 181 C HIS 182 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.2 ? 
metalc ? metalc4 C NE2 HIS 195 C HIS 196 1_555 P FE HEM . C HEM 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.205 ? 
metalc ? metalc5 D NE2 HIS 40 D HIS 41 1_555 X FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.103 ? 
metalc ? metalc6 D SD MET 159 D MET 160 1_555 X FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? 
metalc ? metalc7 E ND1 HIS 141 E HIS 141 1_555 AA FE2 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.669 ? 
metalc ? metalc8 E SG CYS 158 E CYS 158 1_555 AA FE1 FES . E FES 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.588 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 531 n n 
CHA C4D HEM doub 532 n n 
CHA HHA HEM sing 533 n n 
CHB C4A HEM sing 534 n n 
CHB C1B HEM doub 535 n n 
CHB HHB HEM sing 536 n n 
CHC C4B HEM sing 537 n n 
CHC C1C HEM doub 538 n n 
CHC HHC HEM sing 539 n n 
CHD C4C HEM doub 540 n n 
CHD C1D HEM sing 541 n n 
CHD HHD HEM sing 542 n n 
C1A C2A HEM doub 543 n y 
C1A NA HEM sing 544 n y 
C2A C3A HEM sing 545 n y 
C2A CAA HEM sing 546 n n 
C3A C4A HEM doub 547 n y 
C3A CMA HEM sing 548 n n 
C4A NA HEM sing 549 n y 
CMA HMA HEM sing 550 n n 
CMA HMAA HEM sing 551 n n 
CMA HMAB HEM sing 552 n n 
CAA CBA HEM sing 553 n n 
CAA HAA HEM sing 554 n n 
CAA HAAA HEM sing 555 n n 
CBA CGA HEM sing 556 n n 
CBA HBA HEM sing 557 n n 
CBA HBAA HEM sing 558 n n 
CGA O1A HEM doub 559 n n 
CGA O2A HEM sing 560 n n 
C1B C2B HEM sing 561 n n 
C1B NB HEM sing 562 n n 
C2B C3B HEM doub 563 n n 
C2B CMB HEM sing 564 n n 
C3B C4B HEM sing 565 n n 
C3B CAB HEM sing 566 n n 
C4B NB HEM doub 567 n n 
CMB HMB HEM sing 568 n n 
CMB HMBA HEM sing 569 n n 
CMB HMBB HEM sing 570 n n 
CAB CBB HEM doub 571 n n 
CAB HAB HEM sing 572 n n 
CBB HBB HEM sing 573 n n 
CBB HBBA HEM sing 574 n n 
C1C C2C HEM sing 575 n y 
C1C NC HEM sing 576 n y 
C2C C3C HEM doub 577 n y 
C2C CMC HEM sing 578 n n 
C3C C4C HEM sing 579 n y 
C3C CAC HEM sing 580 n n 
C4C NC HEM sing 581 n y 
CMC HMC HEM sing 582 n n 
CMC HMCA HEM sing 583 n n 
CMC HMCB HEM sing 584 n n 
CAC CBC HEM doub 585 n n 
CAC HAC HEM sing 586 n n 
CBC HBC HEM sing 587 n n 
CBC HBCA HEM sing 588 n n 
C1D C2D HEM sing 589 n n 
C1D ND HEM doub 590 n n 
C2D C3D HEM doub 591 n n 
C2D CMD HEM sing 592 n n 
C3D C4D HEM sing 593 n n 
C3D CAD HEM sing 594 n n 
C4D ND HEM sing 595 n n 
CMD HMD HEM sing 596 n n 
CMD HMDA HEM sing 597 n n 
CMD HMDB HEM sing 598 n n 
CAD CBD HEM sing 599 n n 
CAD HAD HEM sing 600 n n 
CAD HADA HEM sing 601 n n 
CBD CGD HEM sing 602 n n 
CBD HBD HEM sing 603 n n 
CBD HBDA HEM sing 604 n n 
CGD O1D HEM doub 605 n n 
CGD O2D HEM sing 606 n n 
O2A H2A HEM sing 607 n n 
O2D H2D HEM sing 608 n n 
FE NA HEM sing 609 n n 
FE NB HEM sing 610 n n 
FE NC HEM sing 611 n n 
FE ND HEM sing 612 n n 
#
_atom_sites.entry_id                     6ZFT 
_atom_sites.fract_transf_matrix[1][1]    0.004709 
_atom_sites.fract_transf_matrix[1][2]    0.002719 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005437 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002891 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 11 PG4 A 1 501 501 PG4 PG4 . 
L 12 6PE A 1 502 502 6PE 6PE . 
M 11 PG4 A 1 503 601 PG4 PG4 . 
N 13 CDL C 1 401 401 CDL CDL . 
O 14 HEM C 1 402 402 HEM HEM . 
P 14 HEM C 1 403 403 HEM HEM . 
Q 15 JHB C 1 404 404 JHB CK2 . 
R 16 LMT C 1 405 405 LMT LMT . 
S 11 PG4 C 1 406 406 PG4 PG4 . 
T 11 PG4 C 1 407 407 PG4 PG4 . 
U 13 CDL C 1 408 408 CDL CDL . 
V 17 PEE C 1 409 409 PEE PEE . 
W 18 PO4 C 1 410 410 PO4 PO4 . 
X 19 HEC D 1 501 501 HEC HEC . 
Y 13 CDL D 1 502 503 CDL CDL . 
Z 17 PEE D 1 503 204 PEE PEE . 
AA 20 FES E 1 201 201 FES FES . 
BA 21 PX4 E 1 202 202 PX4 PX4 . 
CA 13 CDL E 1 203 205 CDL CDL . 
DA 18 PO4 F 1 501 501 PO4 PO4 . 
EA 18 PO4 G 1 101 101 PO4 PO4 . 
FA 18 PO4 G 1 102 102 PO4 PO4 . 
GA 18 PO4 G 1 103 103 PO4 PO4 . 
HA 18 PO4 H 1 101 101 PO4 PO4 . 
IA 22 HOH A 1 601 505 HOH HOH . 
IA 22 HOH A 2 602 507 HOH HOH . 
IA 22 HOH A 3 603 506 HOH HOH . 
JA 22 HOH B 1 501 504 HOH HOH . 
KA 22 HOH C 1 501 411 HOH HOH . 
KA 22 HOH C 2 502 412 HOH HOH . 
KA 22 HOH C 3 503 414 HOH HOH . 
KA 22 HOH C 4 504 413 HOH HOH . 
LA 22 HOH D 1 601 504 HOH HOH . 
LA 22 HOH D 2 602 505 HOH HOH . 
MA 22 HOH F 1 601 502 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . P 14 -69.243 -65.846 38.443 1 73.6 ? CHA HEM 403 C 1 
HETATM 2 C CHB HEM . . . P 14 -66.696 -69.108 35.992 1 73.63 ? CHB HEM 403 C 1 
HETATM 3 C CHC HEM . . . P 14 -64.874 -70.756 40.167 1 73.74 ? CHC HEM 403 C 1 
HETATM 4 C CHD HEM . . . P 14 -67.954 -67.964 42.587 1 73.64 ? CHD HEM 403 C 1 
HETATM 5 C C1A HEM . . . P 14 -68.643 -66.559 37.443 1 73.61 ? C1A HEM 403 C 1 
HETATM 6 C C2A HEM . . . P 14 -68.704 -66.179 36.091 1 73.64 ? C2A HEM 403 C 1 
HETATM 7 C C3A HEM . . . P 14 -67.994 -67.097 35.391 1 73.66 ? C3A HEM 403 C 1 
HETATM 8 C C4A HEM . . . P 14 -67.501 -68.044 36.308 1 73.63 ? C4A HEM 403 C 1 
HETATM 9 C CMA HEM . . . P 14 -67.791 -67.105 33.903 1 73.71 ? CMA HEM 403 C 1 
HETATM 10 C CAA HEM . . . P 14 -69.423 -64.959 35.541 1 73.68 ? CAA HEM 403 C 1 
HETATM 11 C CBA HEM . . . P 14 -68.493 -63.731 35.321 1 73.89 ? CBA HEM 403 C 1 
HETATM 12 C CGA HEM . . . P 14 -67.751 -63.177 36.54 1 74 ? CGA HEM 403 C 1 
HETATM 13 O O1A HEM . . . P 14 -66.512 -63.299 36.67 1 74.14 ? O1A HEM 403 C 1 
HETATM 14 O O2A HEM . . . P 14 -68.329 -62.543 37.441 1 73.98 ? O2A HEM 403 C 1 
HETATM 15 C C1B HEM . . . P 14 -65.975 -69.827 36.945 1 73.65 ? C1B HEM 403 C 1 
HETATM 16 C C2B HEM . . . P 14 -65.037 -70.826 36.561 1 73.69 ? C2B HEM 403 C 1 
HETATM 17 C C3B HEM . . . P 14 -64.502 -71.291 37.722 1 73.71 ? C3B HEM 403 C 1 
HETATM 18 C C4B HEM . . . P 14 -65.152 -70.537 38.818 1 73.7 ? C4B HEM 403 C 1 
HETATM 19 C CMB HEM . . . P 14 -64.715 -71.268 35.153 1 73.7 ? CMB HEM 403 C 1 
HETATM 20 C CAB HEM . . . P 14 -63.528 -72.364 37.946 1 73.75 ? CAB HEM 403 C 1 
HETATM 21 C CBB HEM . . . P 14 -63.155 -73.209 36.998 1 73.73 ? CBB HEM 403 C 1 
HETATM 22 C C1C HEM . . . P 14 -65.534 -70.141 41.219 1 73.73 ? C1C HEM 403 C 1 
HETATM 23 C C2C HEM . . . P 14 -65.25 -70.299 42.584 1 73.79 ? C2C HEM 403 C 1 
HETATM 24 C C3C HEM . . . P 14 -66.131 -69.499 43.28 1 73.76 ? C3C HEM 403 C 1 
HETATM 25 C C4C HEM . . . P 14 -66.962 -68.869 42.307 1 73.68 ? C4C HEM 403 C 1 
HETATM 26 C CMC HEM . . . P 14 -64.174 -71.173 43.16 1 73.87 ? CMC HEM 403 C 1 
HETATM 27 C CAC HEM . . . P 14 -66.265 -69.316 44.741 1 73.82 ? CAC HEM 403 C 1 
HETATM 28 C CBC HEM . . . P 14 -65.546 -69.94 45.666 1 73.91 ? CBC HEM 403 C 1 
HETATM 29 C C1D HEM . . . P 14 -68.543 -67.16 41.614 1 73.61 ? C1D HEM 403 C 1 
HETATM 30 C C2D HEM . . . P 14 -69.5 -66.082 41.95 1 73.59 ? C2D HEM 403 C 1 
HETATM 31 C C3D HEM . . . P 14 -69.85 -65.492 40.802 1 73.57 ? C3D HEM 403 C 1 
HETATM 32 C C4D HEM . . . P 14 -69.103 -66.201 39.763 1 73.59 ? C4D HEM 403 C 1 
HETATM 33 C CMD HEM . . . P 14 -70.012 -65.695 43.309 1 73.59 ? CMD HEM 403 C 1 
HETATM 34 C CAD HEM . . . P 14 -70.807 -64.337 40.644 1 73.55 ? CAD HEM 403 C 1 
HETATM 35 C CBD HEM . . . P 14 -70.014 -63.032 40.683 1 73.75 ? CBD HEM 403 C 1 
HETATM 36 C CGD HEM . . . P 14 -70.88 -61.797 40.762 1 73.76 ? CGD HEM 403 C 1 
HETATM 37 O O1D HEM . . . P 14 -70.627 -60.922 41.623 1 73.87 ? O1D HEM 403 C 1 
HETATM 38 O O2D HEM . . . P 14 -71.82 -61.629 39.959 1 73.66 ? O2D HEM 403 C 1 
HETATM 39 N NA HEM . . . P 14 -67.878 -67.699 37.577 1 73.6 ? NA HEM 403 C 1 
HETATM 40 N NB HEM . . . P 14 -66.002 -69.686 38.272 1 73.66 ? NB HEM 403 C 1 
HETATM 41 N NC HEM . . . P 14 -66.557 -69.275 41.075 1 73.67 ? NC HEM 403 C 1 
HETATM 42 N ND HEM . . . P 14 -68.335 -67.189 40.289 1 73.61 ? ND HEM 403 C 1 
HETATM 43 FE FE HEM . . . P 14 -67.199 -68.361 39.342 1 73.63 ? FE HEM 403 C 1 
#
_model_server_stats.io_time_ms              32 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    30 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           43 
#