data_6ZFU # _model_server_result.job_id w7jLJrsYNOpVa3b87Ri1Ww _model_server_result.datetime_utc '2024-11-23 14:38:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zfu # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":408}' # _entry.id 6ZFU # _exptl.entry_id 6ZFU _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 425.4 _entity.id 17 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-methyl-1-oxidanyl-2-[4-[[4-(trifluoromethyloxy)phenyl]methyl]phenyl]quinolin-4-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ZFU _cell.length_a 210.74 _cell.length_b 210.74 _cell.length_c 343.935 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZFU _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details decameric _pdbx_struct_assembly.oligomeric_count 10 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 17 _struct_asym.id U _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 E SG CYS 144 E CYS 144 1_555 E SG CYS 160 E CYS 160 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 H SG CYS 12 H CYS 24 1_555 H SG CYS 56 H CYS 68 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.048 ? disulf ? disulf3 H SG CYS 28 H CYS 40 1_555 H SG CYS 42 H CYS 54 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? metalc ? metalc1 C NE2 HIS 82 C HIS 83 1_555 N FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.186 ? metalc ? metalc2 C NE2 HIS 96 C HIS 97 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc3 C NE2 HIS 181 C HIS 182 1_555 N FE HEM . C HEM 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc4 C NE2 HIS 195 C HIS 196 1_555 O FE HEM . C HEM 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc5 D NE2 HIS 40 D HIS 41 1_555 V FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.106 ? metalc ? metalc6 D SD MET 159 D MET 160 1_555 V FE HEC . D HEC 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.391 ? # _chem_comp.formula 'C24 H18 F3 N O3' _chem_comp.formula_weight 425.4 _chem_comp.id JHE _chem_comp.mon_nstd_flag . _chem_comp.name 3-methyl-1-oxidanyl-2-[4-[[4-(trifluoromethyloxy)phenyl]methyl]phenyl]quinolin-4-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C16 C17 JHE sing 657 n n C16 C13 JHE sing 658 n n C22 C17 JHE doub 659 n y C22 C21 JHE sing 660 n y C17 C18 JHE sing 661 n y C21 C20 JHE doub 662 n y C14 C13 JHE doub 663 n y C14 C15 JHE sing 664 n y C18 C19 JHE doub 665 n y C20 C19 JHE sing 666 n y C20 O2 JHE sing 667 n n F1 C23 JHE sing 668 n n C13 C12 JHE sing 669 n y O2 C23 JHE sing 670 n n C15 C10 JHE doub 671 n y C23 F JHE sing 672 n n C23 F2 JHE sing 673 n n C12 C11 JHE doub 674 n y C10 C11 JHE sing 675 n y C10 C3 JHE sing 676 n n C9 C4 JHE sing 677 n n C3 C4 JHE doub 678 n n C3 N JHE sing 679 n n O1 N JHE sing 680 n n C4 C JHE sing 681 n n N C2 JHE sing 682 n n C O JHE doub 683 n n C C1 JHE sing 684 n n C2 C8 JHE doub 685 n y C2 C1 JHE sing 686 n y C8 C7 JHE sing 687 n y C1 C5 JHE doub 688 n y C7 C6 JHE doub 689 n y C5 C6 JHE sing 690 n y C5 H1 JHE sing 691 n n C6 H2 JHE sing 692 n n C7 H3 JHE sing 693 n n C8 H4 JHE sing 694 n n C9 H5 JHE sing 695 n n C9 H6 JHE sing 696 n n C9 H7 JHE sing 697 n n C11 H8 JHE sing 698 n n C12 H9 JHE sing 699 n n C14 H10 JHE sing 700 n n C15 H11 JHE sing 701 n n C16 H12 JHE sing 702 n n C16 H13 JHE sing 703 n n C19 H14 JHE sing 704 n n C21 H15 JHE sing 705 n n C22 H16 JHE sing 706 n n C18 H17 JHE sing 707 n n O1 H18 JHE sing 708 n n # _atom_sites.entry_id 6ZFU _atom_sites.fract_transf_matrix[1][1] 0.004745 _atom_sites.fract_transf_matrix[1][2] 0.00274 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005479 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.002908 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 11 PG4 A 1 501 501 PG4 PG4 . L 12 6PE A 1 502 502 6PE 6PE . M 13 CDL A 1 503 401 CDL CDL . N 14 HEM C 1 401 402 HEM HEM . O 14 HEM C 1 402 403 HEM HEM . P 15 LMT C 1 403 405 LMT LMT . Q 11 PG4 C 1 404 406 PG4 PG4 . R 11 PG4 C 1 405 407 PG4 PG4 . S 13 CDL C 1 406 408 CDL CDL . T 16 PEE C 1 407 409 PEE PEE . U 17 JHE C 1 408 404 JHE RKA . V 18 HEC D 1 501 501 HEC HEC . W 19 PO4 D 1 502 502 PO4 PO4 . X 13 CDL D 1 503 503 CDL CDL . Y 20 FES E 1 201 201 FES FES . Z 21 PX4 E 1 202 202 PX4 PX4 . AA 16 PEE E 1 203 204 PEE PEE . BA 13 CDL E 1 204 205 CDL CDL . CA 19 PO4 F 1 501 501 PO4 PO4 . DA 19 PO4 G 1 101 101 PO4 PO4 . EA 19 PO4 G 1 102 102 PO4 PO4 . FA 19 PO4 G 1 103 103 PO4 PO4 . GA 22 HOH A 1 601 503 HOH HOH . GA 22 HOH A 2 602 505 HOH HOH . GA 22 HOH A 3 603 504 HOH HOH . HA 22 HOH C 1 501 501 HOH HOH . IA 22 HOH G 1 201 104 HOH HOH . JA 22 HOH I 1 501 501 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 JHE . . . U 17 -69.954 -62.413 32.59 1 69.2 ? C1 JHE 408 C 1 HETATM 2 C C2 JHE . . . U 17 -68.593 -62.03 32.104 1 69.57 ? C2 JHE 408 C 1 HETATM 3 C C3 JHE . . . U 17 -68.463 -64.075 30.691 1 70.79 ? C3 JHE 408 C 1 HETATM 4 C C5 JHE . . . U 17 -70.598 -61.568 33.503 1 70.64 ? C5 JHE 408 C 1 HETATM 5 C C6 JHE . . . U 17 -69.961 -60.394 33.929 1 69.38 ? C6 JHE 408 C 1 HETATM 6 C C7 JHE . . . U 17 -68.687 -60.038 33.464 1 67.38 ? C7 JHE 408 C 1 HETATM 7 C C8 JHE . . . U 17 -68.001 -60.844 32.558 1 67.34 ? C8 JHE 408 C 1 HETATM 8 C C9 JHE . . . U 17 -70.386 -65.816 30.598 1 68.2 ? C9 JHE 408 C 1 HETATM 9 C C10 JHE . . . U 17 -67.643 -64.855 29.72 1 72.67 ? C10 JHE 408 C 1 HETATM 10 C C11 JHE . . . U 17 -66.785 -65.87 30.144 1 73.88 ? C11 JHE 408 C 1 HETATM 11 C C12 JHE . . . U 17 -66.007 -66.567 29.208 1 75.27 ? C12 JHE 408 C 1 HETATM 12 C C13 JHE . . . U 17 -66.09 -66.262 27.842 1 76.96 ? C13 JHE 408 C 1 HETATM 13 C C14 JHE . . . U 17 -66.948 -65.245 27.436 1 78.73 ? C14 JHE 408 C 1 HETATM 14 C C15 JHE . . . U 17 -67.722 -64.543 28.365 1 75.97 ? C15 JHE 408 C 1 HETATM 15 C C16 JHE . . . U 17 -65.282 -66.982 26.773 1 80.11 ? C16 JHE 408 C 1 HETATM 16 C C17 JHE . . . U 17 -65.104 -68.442 27.103 1 84.56 ? C17 JHE 408 C 1 HETATM 17 C C19 JHE . . . U 17 -63.674 -70.265 27.756 1 90.63 ? C19 JHE 408 C 1 HETATM 18 C C21 JHE . . . U 17 -66.042 -70.638 27.379 1 88.89 ? C21 JHE 408 C 1 HETATM 19 C C22 JHE . . . U 17 -66.21 -69.299 27.068 1 87.01 ? C22 JHE 408 C 1 HETATM 20 C C23 JHE . . . U 17 -65.66 -73.221 28.692 1 121.31 ? C23 JHE 408 C 1 HETATM 21 F F2 JHE . . . U 17 -66.121 -72.676 29.815 1 123.23 ? F2 JHE 408 C 1 HETATM 22 F F JHE . . . U 17 -65.194 -74.416 28.99 1 121.01 ? F JHE 408 C 1 HETATM 23 F F1 JHE . . . U 17 -66.65 -73.324 27.825 1 132.31 ? F1 JHE 408 C 1 HETATM 24 O O2 JHE . . . U 17 -64.625 -72.452 28.052 1 109.05 ? O2 JHE 408 C 1 HETATM 25 C C20 JHE . . . U 17 -64.781 -71.126 27.732 1 94.04 ? C20 JHE 408 C 1 HETATM 26 C C18 JHE . . . U 17 -63.835 -68.917 27.449 1 86.86 ? C18 JHE 408 C 1 HETATM 27 C C4 JHE . . . U 17 -69.813 -64.528 31.129 1 67.62 ? C4 JHE 408 C 1 HETATM 28 C C JHE . . . U 17 -70.573 -63.683 32.099 1 67.37 ? C JHE 408 C 1 HETATM 29 O O JHE . . . U 17 -71.707 -64.017 32.503 1 66.09 ? O JHE 408 C 1 HETATM 30 N N JHE . . . U 17 -67.917 -62.861 31.187 1 71.71 ? N JHE 408 C 1 HETATM 31 O O1 JHE . . . U 17 -66.621 -62.449 30.748 1 75.96 ? O1 JHE 408 C 1 # _model_server_stats.io_time_ms 35 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 49 _model_server_stats.query_time_ms 254 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #