data_6ZG0 # _model_server_result.job_id mtILbLyvHqI6BPyiqsTY6g _model_server_result.datetime_utc '2025-02-28 15:06:52' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zg0 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"IA","auth_seq_id":801}' # _entry.id 6ZG0 # _exptl.entry_id 6ZG0 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 78.133 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description BETA-MERCAPTOETHANOL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 J N N ? 3 O N N ? 3 S N N ? 3 Y N N ? 3 FA N N ? 3 HA N N ? 3 IA N N ? 3 JA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 484 A CYS 482 1_555 J S2 BME . A BME 802 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.054 ? covale ? covale2 B SG CYS 484 B CYS 482 1_555 O S2 BME . B BME 804 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.076 ? covale ? covale3 C SG CYS 484 C CYS 482 1_555 S S2 BME . C BME 801 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.057 ? covale ? covale4 D SG CYS 484 D CYS 482 1_555 Y S2 BME . D BME 803 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.057 ? covale ? covale5 E SG CYS 484 E CYS 482 1_555 FA S2 BME . E BME 802 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.062 ? covale ? covale6 F SG CYS 484 F CYS 482 1_555 HA S2 BME . F BME 802 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.061 ? covale ? covale7 G SG CYS 484 G CYS 482 1_555 IA S2 BME . G BME 801 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.053 ? covale ? covale8 H SG CYS 484 H CYS 482 1_555 JA S2 BME . H BME 801 1_555 ? B ? ? ? ? ? ? ? ? ? ? 2.064 ? # _chem_comp.formula 'C2 H6 O S' _chem_comp.formula_weight 78.133 _chem_comp.id BME _chem_comp.mon_nstd_flag . _chem_comp.name BETA-MERCAPTOETHANOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ZG0 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 EDO A 1 801 685 EDO EDO . J 3 BME A 1 802 885 BME BME . K 2 EDO A 1 803 985 EDO EDO . L 2 EDO B 1 801 885 EDO EDO . M 2 EDO B 1 802 1085 EDO EDO . N 4 PEG B 1 803 1185 PEG PEG . O 3 BME B 1 804 1285 BME BME . P 5 PGE B 1 805 1485 PGE PGE . Q 2 EDO B 1 806 1585 EDO EDO . R 2 EDO B 1 807 1685 EDO EDO . S 3 BME C 1 801 685 BME BME . T 2 EDO C 1 802 785 EDO EDO . U 2 EDO C 1 803 885 EDO EDO . V 2 EDO C 1 804 985 EDO EDO . W 2 EDO D 1 801 585 EDO EDO . X 4 PEG D 1 802 785 PEG PEG . Y 3 BME D 1 803 885 BME BME . Z 2 EDO D 1 804 985 EDO EDO . AA 2 EDO D 1 805 1085 EDO EDO . BA 2 EDO D 1 806 1385 EDO EDO . CA 2 EDO D 1 807 1485 EDO EDO . DA 2 EDO D 1 808 985 EDO EDO . EA 2 EDO E 1 801 685 EDO EDO . FA 3 BME E 1 802 785 BME BME . GA 2 EDO F 1 801 1085 EDO EDO . HA 3 BME F 1 802 685 BME BME . IA 3 BME G 1 801 585 BME BME . JA 3 BME H 1 801 985 BME BME . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 BME . . . IA 3 176.993 130.785 141.756 0.6 82.05 ? C1 BME 801 G 1 HETATM 2 C C2 BME . . . IA 3 178.326 131.347 141.357 0.6 91.43 ? C2 BME 801 G 1 HETATM 3 O O1 BME . . . IA 3 175.961 131.075 140.828 0.6 52.38 ? O1 BME 801 G 1 HETATM 4 S S2 BME . . . IA 3 179.151 130.257 140.159 0.6 110.42 ? S2 BME 801 G 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 328 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #