data_6ZG3
#
_model_server_result.job_id            KsmcSnoA8dgc94OCCdhUYA 
_model_server_result.datetime_utc      '2024-12-21 14:53:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zg3 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"X","auth_seq_id":601}' 
#
_entry.id    6ZG3 
#
_exptl.entry_id    6ZG3 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              510.615 
_entity.id                          7 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            DODECYL-BETA-D-MALTOSIDE 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         88.997 
_cell.angle_beta          102.271 
_cell.angle_gamma         102.244 
_cell.entry_id            6ZG3 
_cell.length_a            97.29 
_cell.length_b            110.47 
_cell.length_c            110.5 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZG3 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA pentameric 5 author_and_software_defined_assembly 1 
PISA pentameric 5 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,G,H,I,K,V,W,X,Y,Z,AA,BA 1 1 
B,C,D,F,J,L,M,N,O,P,Q,R,S,T,U,CA 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 7 M N N 
? 7 N N N 
? 7 S N N 
? 7 W N N 
? 7 X N N 
? 7 Z N N 
? 7 AA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 E SG CYS 22 E CYS 22 1_555 E SG CYS 96 E CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? 
disulf ? disulf2 E SG CYS 50 E CYS 50 1_555 E SG CYS 106 E CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf3 J SG CYS 22 J CYS 22 1_555 J SG CYS 96 J CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
disulf ? disulf4 J SG CYS 50 J CYS 50 1_555 J SG CYS 106 J CYS 106 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
#
_chem_comp.formula           'C24 H46 O11' 
_chem_comp.formula_weight    510.615 
_chem_comp.id                LMT 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              DODECYL-BETA-D-MALTOSIDE 
_chem_comp.type              d-saccharide 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1B C2B LMT sing 212 n n 
C1B O1B LMT sing 213 n n 
C1B O5B LMT sing 214 n n 
C1B H1B LMT sing 215 n n 
C2B C3B LMT sing 216 n n 
C2B O2B LMT sing 217 n n 
C2B H2B LMT sing 218 n n 
C3B C4B LMT sing 219 n n 
C3B O3B LMT sing 220 n n 
C3B H3B LMT sing 221 n n 
C4B C5B LMT sing 222 n n 
C4B O4' LMT sing 223 n n 
C4B H4B LMT sing 224 n n 
C5B C6B LMT sing 225 n n 
C5B O5B LMT sing 226 n n 
C5B H5B LMT sing 227 n n 
C6B O6B LMT sing 228 n n 
C6B "H6'2" LMT sing 229 n n 
C6B "H6'1" LMT sing 230 n n 
O1B C4' LMT sing 231 n n 
O2B H2O1 LMT sing 232 n n 
O3B H3O1 LMT sing 233 n n 
O4' H4O1 LMT sing 234 n n 
O6B H6B LMT sing 235 n n 
C1' C2' LMT sing 236 n n 
C1' O1' LMT sing 237 n n 
C1' O5' LMT sing 238 n n 
C1' H1' LMT sing 239 n n 
C2' C3' LMT sing 240 n n 
C2' O2' LMT sing 241 n n 
C2' H2' LMT sing 242 n n 
C3' C4' LMT sing 243 n n 
C3' O3' LMT sing 244 n n 
C3' H3' LMT sing 245 n n 
C4' C5' LMT sing 246 n n 
C4' H4' LMT sing 247 n n 
C5' C6' LMT sing 248 n n 
C5' O5' LMT sing 249 n n 
C5' H5' LMT sing 250 n n 
C6' O6' LMT sing 251 n n 
C6' H6D LMT sing 252 n n 
C6' H6E LMT sing 253 n n 
O1' C1 LMT sing 254 n n 
O2' H2O2 LMT sing 255 n n 
O3' H3O2 LMT sing 256 n n 
O6' H6' LMT sing 257 n n 
C1 C2 LMT sing 258 n n 
C1 H12 LMT sing 259 n n 
C1 H11 LMT sing 260 n n 
C2 C3 LMT sing 261 n n 
C2 H22 LMT sing 262 n n 
C2 H21 LMT sing 263 n n 
C3 C4 LMT sing 264 n n 
C3 H32 LMT sing 265 n n 
C3 H31 LMT sing 266 n n 
C4 C5 LMT sing 267 n n 
C4 H42 LMT sing 268 n n 
C4 H41 LMT sing 269 n n 
C5 C6 LMT sing 270 n n 
C5 H52 LMT sing 271 n n 
C5 H51 LMT sing 272 n n 
C6 C7 LMT sing 273 n n 
C6 H62 LMT sing 274 n n 
C6 H61 LMT sing 275 n n 
C7 C8 LMT sing 276 n n 
C7 H72 LMT sing 277 n n 
C7 H71 LMT sing 278 n n 
C8 C9 LMT sing 279 n n 
C8 H82 LMT sing 280 n n 
C8 H81 LMT sing 281 n n 
C9 C10 LMT sing 282 n n 
C9 H92 LMT sing 283 n n 
C9 H91 LMT sing 284 n n 
C10 C11 LMT sing 285 n n 
C10 H102 LMT sing 286 n n 
C10 H101 LMT sing 287 n n 
C11 C12 LMT sing 288 n n 
C11 H112 LMT sing 289 n n 
C11 H111 LMT sing 290 n n 
C12 H123 LMT sing 291 n n 
C12 H122 LMT sing 292 n n 
C12 H121 LMT sing 293 n n 
#
_atom_sites.entry_id                     6ZG3 
_atom_sites.fract_transf_matrix[1][1]    0.010279 
_atom_sites.fract_transf_matrix[1][2]    0.002231 
_atom_sites.fract_transf_matrix[1][3]    0.002301 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009263 
_atom_sites.fract_transf_matrix[2][3]    0.000268 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009265 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 6 PEG A 1 301 10 PEG PEG . 
L 6 PEG B 1 301 1 PEG PEG . 
M 7 LMT C 1 501 501 LMT LMT . 
N 7 LMT C 1 502 701 LMT LMT . 
O 8 CIT C 1 503 801 CIT CIT . 
P 6 PEG C 1 504 2 PEG PEG . 
Q 6 PEG C 1 505 3 PEG PEG . 
R 6 PEG C 1 506 4 PEG PEG . 
S 7 LMT D 1 301 301 LMT LMT . 
T 6 PEG D 1 302 5 PEG PEG . 
U 6 PEG D 1 303 9 PEG PEG . 
V 6 PEG E 1 201 6 PEG PEG . 
W 7 LMT G 1 901 901 LMT LMT . 
X 7 LMT H 1 601 601 LMT LMT . 
Y 8 CIT H 1 602 701 CIT CIT . 
Z 7 LMT H 1 603 801 LMT LMT . 
AA 7 LMT I 1 301 301 LMT LMT . 
BA 6 PEG I 1 302 8 PEG PEG . 
CA 6 PEG J 1 201 7 PEG PEG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1B LMT . . . X 7 9.555 111.458 74.577 1 166.25 ? C1B LMT 601 H 1 
HETATM 2 C C2B LMT . . . X 7 8.337 110.939 73.753 1 167.74 ? C2B LMT 601 H 1 
HETATM 3 C C3B LMT . . . X 7 8.738 110.755 72.255 1 172.37 ? C3B LMT 601 H 1 
HETATM 4 C C4B LMT . . . X 7 9.433 112.026 71.683 1 172.06 ? C4B LMT 601 H 1 
HETATM 5 C C5B LMT . . . X 7 10.509 112.5 72.685 1 172.27 ? C5B LMT 601 H 1 
HETATM 6 C C6B LMT . . . X 7 10.17 113.91 73.188 1 167.89 ? C6B LMT 601 H 1 
HETATM 7 O O1B LMT . . . X 7 9.821 110.723 75.764 1 157.13 ? O1B LMT 601 H 1 
HETATM 8 O O2B LMT . . . X 7 7.879 109.767 74.315 1 158.77 ? O2B LMT 601 H 1 
HETATM 9 O O3B LMT . . . X 7 7.682 110.358 71.468 1 170.54 ? O3B LMT 601 H 1 
HETATM 10 O O4' LMT . . . X 7 10.014 111.765 70.456 1 163.15 ? O4' LMT 601 H 1 
HETATM 11 O O5B LMT . . . X 7 10.691 111.593 73.763 1 172.29 ? O5B LMT 601 H 1 
HETATM 12 O O6B LMT . . . X 7 11.007 114.837 72.618 1 169.24 ? O6B LMT 601 H 1 
HETATM 13 C C1' LMT . . . X 7 8.268 111.892 79.18 1 131.74 ? C1' LMT 601 H 1 
HETATM 14 C C2' LMT . . . X 7 8.962 113.092 78.477 1 135.59 ? C2' LMT 601 H 1 
HETATM 15 C C3' LMT . . . X 7 9.387 112.749 77.024 1 151.96 ? C3' LMT 601 H 1 
HETATM 16 C C4' LMT . . . X 7 10.272 111.476 76.898 1 149.38 ? C4' LMT 601 H 1 
HETATM 17 C C5' LMT . . . X 7 10.172 110.624 78.217 1 141.54 ? C5' LMT 601 H 1 
HETATM 18 C C6' LMT . . . X 7 11.332 110.799 79.204 1 131.3 ? C6' LMT 601 H 1 
HETATM 19 O O1' LMT . . . X 7 8.278 112.035 80.557 1 124.02 ? O1' LMT 601 H 1 
HETATM 20 O O2' LMT . . . X 7 8.07 114.144 78.407 1 126.96 ? O2' LMT 601 H 1 
HETATM 21 O O3' LMT . . . X 7 10.014 113.841 76.445 1 155.49 ? O3' LMT 601 H 1 
HETATM 22 O O5' LMT . . . X 7 8.876 110.618 78.853 1 136.22 ? O5' LMT 601 H 1 
HETATM 23 O O6' LMT . . . X 7 11.468 109.627 79.943 1 125.29 ? O6' LMT 601 H 1 
HETATM 24 C C1 LMT . . . X 7 7.031 112.263 81.214 1 111.02 ? C1 LMT 601 H 1 
HETATM 25 C C2 LMT . . . X 7 6.744 113.697 80.912 1 97.62 ? C2 LMT 601 H 1 
HETATM 26 C C3 LMT . . . X 7 7.234 114.704 81.86 1 87.69 ? C3 LMT 601 H 1 
HETATM 27 C C4 LMT . . . X 7 6.176 114.952 82.88 1 82.46 ? C4 LMT 601 H 1 
HETATM 28 C C5 LMT . . . X 7 5.034 115.563 82.143 1 84.25 ? C5 LMT 601 H 1 
HETATM 29 C C6 LMT . . . X 7 4.015 116.205 83.031 1 83.82 ? C6 LMT 601 H 1 
HETATM 30 C C7 LMT . . . X 7 3.279 117.256 82.246 1 86.55 ? C7 LMT 601 H 1 
HETATM 31 C C8 LMT . . . X 7 1.806 117.097 82.424 1 87.34 ? C8 LMT 601 H 1 
HETATM 32 C C9 LMT . . . X 7 1.14 118.232 83.162 1 93.06 ? C9 LMT 601 H 1 
HETATM 33 C C10 LMT . . . X 7 1.487 119.528 82.438 1 106.18 ? C10 LMT 601 H 1 
HETATM 34 C C11 LMT . . . X 7 0.563 120.685 82.763 1 108.94 ? C11 LMT 601 H 1 
HETATM 35 C C12 LMT . . . X 7 0.436 121.655 81.606 1 95.25 ? C12 LMT 601 H 1 
#
_model_server_stats.io_time_ms              48 
_model_server_stats.parse_time_ms           34 
_model_server_stats.create_model_time_ms    17 
_model_server_stats.query_time_ms           252 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           35 
#