data_6ZG4 # _model_server_result.job_id 8tpb-HBaqG5ozAiBVMh_aQ _model_server_result.datetime_utc '2024-11-14 18:27:10' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zg4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":1208}' # _entry.id 6ZG4 # _exptl.entry_id 6ZG4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.173 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'TRIETHYLENE GLYCOL' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZG4 _cell.length_a 62.47 _cell.length_b 65.45 _cell.length_c 154.83 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZG4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 79 A CYS 98 1_555 A SG CYS 159 A CYS 178 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf2 A SG CYS 398 A CYS 391 1_555 A SG CYS 401 A CYS 394 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? # _chem_comp.formula 'C6 H14 O4' _chem_comp.formula_weight 150.173 _chem_comp.id PGE _chem_comp.mon_nstd_flag . _chem_comp.name 'TRIETHYLENE GLYCOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PGE sing 290 n n C1 C2 PGE sing 291 n n C1 H1 PGE sing 292 n n C1 H12 PGE sing 293 n n O1 HO1 PGE sing 294 n n C2 O2 PGE sing 295 n n C2 H2 PGE sing 296 n n C2 H22 PGE sing 297 n n O2 C3 PGE sing 298 n n C3 C4 PGE sing 299 n n C3 H3 PGE sing 300 n n C3 H32 PGE sing 301 n n C4 O3 PGE sing 302 n n C4 H4 PGE sing 303 n n C4 H42 PGE sing 304 n n O4 C6 PGE sing 305 n n O4 HO4 PGE sing 306 n n C6 C5 PGE sing 307 n n C6 H6 PGE sing 308 n n C6 H62 PGE sing 309 n n C5 O3 PGE sing 310 n n C5 H5 PGE sing 311 n n C5 H52 PGE sing 312 n n # _atom_sites.entry_id 6ZG4 _atom_sites.fract_transf_matrix[1][1] 0.016008 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015279 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006459 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QK8 A 1 1201 500 QK8 UNL . C 3 OLA A 1 1202 2101 OLA OLA . D 3 OLA A 1 1203 2102 OLA OLA . E 3 OLA A 1 1204 2103 OLA OLA . F 3 OLA A 1 1205 2104 OLA OLA . G 3 OLA A 1 1206 2105 OLA OLA . H 3 OLA A 1 1207 2107 OLA OLA . I 4 PGE A 1 1208 2202 PGE PGE . J 5 PO4 A 1 1209 2301 PO4 PO4 . K 5 PO4 A 1 1210 2302 PO4 PO4 . L 3 OLA A 1 1211 2401 OLA OLA . M 3 OLA A 1 1212 2501 OLA OLA . N 3 OLA A 1 1213 2601 OLA OLA . O 3 OLA A 1 1214 2701 OLA OLA . P 3 OLA A 1 1215 2801 OLA OLA . Q 5 PO4 A 1 1216 1 PO4 PO4 . R 6 HOH A 1 1301 1 HOH HOH . R 6 HOH A 2 1302 2011 HOH HOH . R 6 HOH A 3 1303 2 HOH HOH . R 6 HOH A 4 1304 2017 HOH HOH . R 6 HOH A 5 1305 3 HOH HOH . R 6 HOH A 6 1306 19 HOH HOH . R 6 HOH A 7 1307 26 HOH HOH . R 6 HOH A 8 1308 17 HOH HOH . R 6 HOH A 9 1309 2012 HOH HOH . R 6 HOH A 10 1310 2004 HOH HOH . R 6 HOH A 11 1311 8 HOH HOH . R 6 HOH A 12 1312 2002 HOH HOH . R 6 HOH A 13 1313 2018 HOH HOH . R 6 HOH A 14 1314 35 HOH HOH . R 6 HOH A 15 1315 2005 HOH HOH . R 6 HOH A 16 1316 36 HOH HOH . R 6 HOH A 17 1317 30 HOH HOH . R 6 HOH A 18 1318 22 HOH HOH . R 6 HOH A 19 1319 2024 HOH HOH . R 6 HOH A 20 1320 2035 HOH HOH . R 6 HOH A 21 1321 2003 HOH HOH . R 6 HOH A 22 1322 2021 HOH HOH . R 6 HOH A 23 1323 2026 HOH HOH . R 6 HOH A 24 1324 20 HOH HOH . R 6 HOH A 25 1325 14 HOH HOH . R 6 HOH A 26 1326 24 HOH HOH . R 6 HOH A 27 1327 6 HOH HOH . R 6 HOH A 28 1328 31 HOH HOH . R 6 HOH A 29 1329 2001 HOH HOH . R 6 HOH A 30 1330 2007 HOH HOH . R 6 HOH A 31 1331 27 HOH HOH . R 6 HOH A 32 1332 2033 HOH HOH . R 6 HOH A 33 1333 12 HOH HOH . R 6 HOH A 34 1334 2008 HOH HOH . R 6 HOH A 35 1335 25 HOH HOH . R 6 HOH A 36 1336 2031 HOH HOH . R 6 HOH A 37 1337 9 HOH HOH . R 6 HOH A 38 1338 2036 HOH HOH . R 6 HOH A 39 1339 2025 HOH HOH . R 6 HOH A 40 1340 5 HOH HOH . R 6 HOH A 41 1341 18 HOH HOH . R 6 HOH A 42 1342 2013 HOH HOH . R 6 HOH A 43 1343 32 HOH HOH . R 6 HOH A 44 1344 16 HOH HOH . R 6 HOH A 45 1345 2010 HOH HOH . R 6 HOH A 46 1346 2032 HOH HOH . R 6 HOH A 47 1347 2016 HOH HOH . R 6 HOH A 48 1348 2014 HOH HOH . R 6 HOH A 49 1349 2030 HOH HOH . R 6 HOH A 50 1350 10 HOH HOH . R 6 HOH A 51 1351 37 HOH HOH . R 6 HOH A 52 1352 28 HOH HOH . R 6 HOH A 53 1353 4 HOH HOH . R 6 HOH A 54 1354 7 HOH HOH . R 6 HOH A 55 1355 2027 HOH HOH . R 6 HOH A 56 1356 2009 HOH HOH . R 6 HOH A 57 1357 15 HOH HOH . R 6 HOH A 58 1358 2029 HOH HOH . R 6 HOH A 59 1359 29 HOH HOH . R 6 HOH A 60 1360 21 HOH HOH . R 6 HOH A 61 1361 38 HOH HOH . R 6 HOH A 62 1362 2023 HOH HOH . R 6 HOH A 63 1363 34 HOH HOH . R 6 HOH A 64 1364 11 HOH HOH . R 6 HOH A 65 1365 2037 HOH HOH . R 6 HOH A 66 1366 23 HOH HOH . R 6 HOH A 67 1367 39 HOH HOH . R 6 HOH A 68 1368 2015 HOH HOH . R 6 HOH A 69 1369 2020 HOH HOH . R 6 HOH A 70 1370 2034 HOH HOH . R 6 HOH A 71 1371 13 HOH HOH . R 6 HOH A 72 1372 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PGE . . . I 4 -17.516 28.686 15.495 1 54.54 ? C1 PGE 1208 A 1 HETATM 2 O O1 PGE . . . I 4 -16.915 28.446 16.76 1 53.3 ? O1 PGE 1208 A 1 HETATM 3 C C2 PGE . . . I 4 -18.966 28.286 15.455 1 53.59 ? C2 PGE 1208 A 1 HETATM 4 O O2 PGE . . . I 4 -19.447 28.304 14.114 1 51.81 ? O2 PGE 1208 A 1 HETATM 5 C C3 PGE . . . I 4 -19.961 27.044 13.688 1 50.81 ? C3 PGE 1208 A 1 HETATM 6 C C4 PGE . . . I 4 -19.255 26.584 12.445 1 49.99 ? C4 PGE 1208 A 1 HETATM 7 O O4 PGE . . . I 4 -17.365 22.787 13.084 1 46.75 ? O4 PGE 1208 A 1 HETATM 8 C C6 PGE . . . I 4 -18.568 23.097 12.398 1 47.84 ? C6 PGE 1208 A 1 HETATM 9 C C5 PGE . . . I 4 -18.525 24.436 11.724 1 48.59 ? C5 PGE 1208 A 1 HETATM 10 O O3 PGE . . . I 4 -19.624 25.241 12.145 1 50.13 ? O3 PGE 1208 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 44 _model_server_stats.query_time_ms 637 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 10 #