data_6ZGB
#
_model_server_result.job_id            hyfSupjnGAsiV5mNadUEPA 
_model_server_result.datetime_utc      '2024-11-15 19:35:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6zgb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":501}' 
#
_entry.id    6ZGB 
#
_exptl.entry_id    6ZGB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              284.222 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2~{S},3~{S})-2-azanyl-3-[(2-nitrophenyl)methoxy]butanedioic acid' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6ZGB 
_cell.length_a            115.74 
_cell.length_b            115.74 
_cell.length_c            308.49 
_cell.Z_PDB               18 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6ZGB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        154 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 32 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    trimeric 
_pdbx_struct_assembly.oligomeric_count      3 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 D N N 
? 2 F N N 
? 2 I N N 
#
_chem_comp.formula           'C11 H12 N2 O7' 
_chem_comp.formula_weight    284.222 
_chem_comp.id                QJW 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2~{S},3~{S})-2-azanyl-3-[(2-nitrophenyl)methoxy]butanedioic acid' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O4 C11 QJW doub 301 n n 
O5 C11 QJW sing 302 n n 
C11 C10 QJW sing 303 n n 
C10 C8 QJW sing 304 n n 
C10 N1 QJW sing 305 n n 
O7 N2 QJW doub 306 n n 
C8 O1 QJW sing 307 n n 
C8 C9 QJW sing 308 n n 
O1 C7 QJW sing 309 n n 
C4 C3 QJW doub 310 n y 
C4 C5 QJW sing 311 n y 
C3 C2 QJW sing 312 n y 
N2 C5 QJW sing 313 n n 
N2 O6 QJW doub 314 n n 
C5 C6 QJW doub 315 n y 
C2 C1 QJW doub 316 n y 
O2 C9 QJW doub 317 n n 
C6 C1 QJW sing 318 n y 
C6 C7 QJW sing 319 n n 
C9 O3 QJW sing 320 n n 
N1 H1 QJW sing 321 n n 
N1 H2 QJW sing 322 n n 
C4 H4 QJW sing 323 n n 
C7 H5 QJW sing 324 n n 
C7 H6 QJW sing 325 n n 
C8 H7 QJW sing 326 n n 
C10 H8 QJW sing 327 n n 
C1 H9 QJW sing 328 n n 
C2 H10 QJW sing 329 n n 
C3 H11 QJW sing 330 n n 
O3 H12 QJW sing 331 n n 
O5 H13 QJW sing 332 n n 
#
_atom_sites.entry_id                     6ZGB 
_atom_sites.fract_transf_matrix[1][1]    0.00864 
_atom_sites.fract_transf_matrix[1][2]    0.004988 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009977 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.003242 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
D 2 QJW A 1 501 501 QJW LIG . 
E 3 PEG A 1 502 2 PEG PEG . 
F 2 QJW B 1 501 501 QJW LIG . 
G 3 PEG B 1 502 1 PEG PEG . 
H 3 PEG B 1 503 4 PEG PEG . 
I 2 QJW C 1 501 501 QJW LIG . 
J 4 PGE C 1 502 601 PGE PGE . 
K 3 PEG C 1 503 3 PEG PEG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 QJW . . . F 2 75.133 -6.267 30.842 1 209.41 ? N1 QJW 501 B 1 
HETATM 2 C C4 QJW . . . F 2 71.594 -10.861 31.004 1 182.93 ? C4 QJW 501 B 1 
HETATM 3 C C5 QJW . . . F 2 72.459 -9.794 31.19 1 196.37 ? C5 QJW 501 B 1 
HETATM 4 C C6 QJW . . . F 2 73.537 -9.917 32.053 1 188.14 ? C6 QJW 501 B 1 
HETATM 5 C C7 QJW . . . F 2 74.494 -8.745 32.263 1 190.24 ? C7 QJW 501 B 1 
HETATM 6 C C8 QJW . . . F 2 76.68 -8.04 31.638 1 176.61 ? C8 QJW 501 B 1 
HETATM 7 C C10 QJW . . . F 2 76.377 -6.97 30.584 1 196.15 ? C10 QJW 501 B 1 
HETATM 8 C C1 QJW . . . F 2 73.747 -11.108 32.73 1 170.69 ? C1 QJW 501 B 1 
HETATM 9 C C11 QJW . . . F 2 76.345 -7.582 29.185 1 194 ? C11 QJW 501 B 1 
HETATM 10 C C2 QJW . . . F 2 72.882 -12.173 32.544 1 169.17 ? C2 QJW 501 B 1 
HETATM 11 C C3 QJW . . . F 2 71.805 -12.05 31.681 1 171.34 ? C3 QJW 501 B 1 
HETATM 12 C C9 QJW . . . F 2 76.923 -7.437 33.021 1 177.08 ? C9 QJW 501 B 1 
HETATM 13 N N2 QJW . . . F 2 72.232 -8.553 30.476 1 202.77 ? N2 QJW 501 B 1 
HETATM 14 O O1 QJW . . . F 2 75.726 -9.071 31.683 1 184.63 ? O1 QJW 501 B 1 
HETATM 15 O O2 QJW . . . F 2 76.164 -6.541 33.475 1 188.26 ? O2 QJW 501 B 1 
HETATM 16 O O3 QJW . . . F 2 77.894 -7.842 33.713 1 189.03 ? O3 QJW 501 B 1 
HETATM 17 O O4 QJW . . . F 2 76.209 -6.833 28.183 1 176.98 ? O4 QJW 501 B 1 
HETATM 18 O O5 QJW . . . F 2 76.453 -8.826 29.025 1 191.67 ? O5 QJW 501 B 1 
HETATM 19 O O6 QJW . . . F 2 72.212 -8.552 29.072 1 187.18 ? O6 QJW 501 B 1 
HETATM 20 O O7 QJW . . . F 2 72.031 -7.357 31.184 1 201.14 ? O7 QJW 501 B 1 
#
_model_server_stats.io_time_ms              27 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    41 
_model_server_stats.query_time_ms           338 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           20 
#