data_6ZGC # _model_server_result.job_id lS5L6HxSsAvHEFIex7ZmFg _model_server_result.datetime_utc '2024-11-28 11:21:53' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zgc # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"S","auth_seq_id":503}' # _entry.id 6ZGC # _exptl.entry_id 6ZGC _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 94.971 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHATE ION' _entity.pdbx_number_of_molecules 16 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 95.262 _cell.angle_gamma 90 _cell.entry_id 6ZGC _cell.length_a 84.62 _cell.length_b 101.69 _cell.length_c 180.126 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZGC _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y (x,y,-x+z)' _symmetry.space_group_name_H-M 'I 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,I,J,CA 1 1 B,K,L,M,N,O,P,DA 2 1 C,Q,R,S,T,U,V,EA 3 1 D,W,X,Y,Z,AA,BA,FA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 M N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 S N N ? 4 T N N ? 4 U N N ? 4 V N N ? 4 Y N N ? 4 Z N N ? 4 AA N N ? 4 BA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 197 A CYS 395 1_555 C SG CYS 197 C CYS 395 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 197 B CYS 395 1_555 D SG CYS 197 D CYS 395 1_655 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? metalc ? metalc1 F K K . A K 502 1_555 G O1 PO4 . A PO4 503 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.255 ? metalc ? metalc2 L K K . B K 502 1_555 N O4 PO4 . B PO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.927 ? metalc ? metalc3 L K K . B K 502 1_555 DA O HOH . B HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.497 ? metalc ? metalc4 R K K . C K 502 1_555 T O2 PO4 . C PO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.328 ? metalc ? metalc5 X K K . D K 502 1_555 Z O2 PO4 . D PO4 504 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.431 ? # _chem_comp.formula 'O4 P -3' _chem_comp.formula_weight 94.971 _chem_comp.id PO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O1 PO4 doub 335 n n P O2 PO4 sing 336 n n P O3 PO4 sing 337 n n P O4 PO4 sing 338 n n # _atom_sites.entry_id 6ZGC _atom_sites.fract_transf_matrix[1][1] 0.011818 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001088 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009834 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005575 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 H8H A 1 501 1 H8H SAC . F 3 K A 1 502 5 K K . G 4 PO4 A 1 503 3 PO4 PO4 . H 4 PO4 A 1 504 4 PO4 PO4 . I 4 PO4 A 1 505 11 PO4 PO4 . J 4 PO4 A 1 506 13 PO4 PO4 . K 2 H8H B 1 501 2 H8H SAC . L 3 K B 1 502 7 K K . M 4 PO4 B 1 503 1 PO4 PO4 . N 4 PO4 B 1 504 2 PO4 PO4 . O 4 PO4 B 1 505 5 PO4 PO4 . P 4 PO4 B 1 506 14 PO4 PO4 . Q 2 H8H C 1 501 4 H8H SAC . R 3 K C 1 502 6 K K . S 4 PO4 C 1 503 6 PO4 PO4 . T 4 PO4 C 1 504 10 PO4 PO4 . U 4 PO4 C 1 505 12 PO4 PO4 . V 4 PO4 C 1 506 15 PO4 PO4 . W 2 H8H D 1 501 3 H8H SAC . X 3 K D 1 502 8 K K . Y 4 PO4 D 1 503 7 PO4 PO4 . Z 4 PO4 D 1 504 8 PO4 PO4 . AA 4 PO4 D 1 505 9 PO4 PO4 . BA 4 PO4 D 1 506 16 PO4 PO4 . CA 5 HOH A 1 601 7 HOH HOH . CA 5 HOH A 2 602 5 HOH HOH . CA 5 HOH A 3 603 6 HOH HOH . CA 5 HOH A 4 604 4 HOH HOH . CA 5 HOH A 5 605 1 HOH HOH . CA 5 HOH A 6 606 8 HOH HOH . CA 5 HOH A 7 607 21 HOH HOH . CA 5 HOH A 8 608 9 HOH HOH . CA 5 HOH A 9 609 23 HOH HOH . CA 5 HOH A 10 610 22 HOH HOH . DA 5 HOH B 1 601 11 HOH HOH . DA 5 HOH B 2 602 14 HOH HOH . DA 5 HOH B 3 603 26 HOH HOH . DA 5 HOH B 4 604 25 HOH HOH . EA 5 HOH C 1 601 15 HOH HOH . FA 5 HOH D 1 601 3 HOH HOH . FA 5 HOH D 2 602 19 HOH HOH . FA 5 HOH D 3 603 18 HOH HOH . FA 5 HOH D 4 604 24 HOH HOH . FA 5 HOH D 5 605 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P PO4 . . . S 4 134.661 -53.804 62.252 1 66.01 ? P PO4 503 C 1 HETATM 2 O O1 PO4 . . . S 4 135.714 -54.256 61.267 1 55.4 ? O1 PO4 503 C 1 HETATM 3 O O2 PO4 . . . S 4 134.134 -52.451 61.838 1 51.49 ? O2 PO4 503 C 1 HETATM 4 O O3 PO4 . . . S 4 133.524 -54.8 62.264 1 63.92 ? O3 PO4 503 C 1 HETATM 5 O O4 PO4 . . . S 4 135.269 -53.714 63.633 1 50.32 ? O4 PO4 503 C 1 # _model_server_stats.io_time_ms 25 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 312 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 5 #