data_6ZGM # _model_server_result.job_id -6nnSk2_4EKEIJgos8B8WQ _model_server_result.datetime_utc '2024-12-21 13:53:33' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zgm # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 6ZGM # _exptl.entry_id 6ZGM _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZGM _cell.length_a 67.96 _cell.length_b 78.178 _cell.length_c 79.659 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZGM _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 B N N ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 88 A HIS 116 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.081 ? metalc ? metalc2 A ND1 HIS 90 A HIS 118 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.935 ? metalc ? metalc3 A OD2 ASP 92 A ASP 120 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc4 A NE2 HIS 127 A HIS 170 1_555 D ZN ZN . A ZN 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? metalc ? metalc5 A NE2 HIS 153 A HIS 196 1_555 B ZN ZN . A ZN 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.021 ? metalc ? metalc6 A SG CYS 172 A CYS 221 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.295 ? metalc ? metalc7 A NE2 HIS 214 A HIS 263 1_555 C ZN ZN . A ZN 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.199 ? metalc ? metalc8 A ND1 HIS 225 A HIS 285 1_555 D ZN ZN . A ZN 403 6_444 ? ? ? ? ? ? ? ? ? ? ? ? 2.071 ? metalc ? metalc9 B ZN ZN . A ZN 401 1_555 H O HOH . A HOH 535 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.908 ? metalc ? metalc10 C ZN ZN . A ZN 402 1_555 G O4 QKK . A QKK 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.162 ? metalc ? metalc11 C ZN ZN . A ZN 402 1_555 G N5 QKK . A QKK 406 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.108 ? metalc ? metalc12 D ZN ZN . A ZN 403 1_555 E O ACT . A ACT 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.698 ? metalc ? metalc13 D ZN ZN . A ZN 403 1_555 E OXT ACT . A ACT 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? metalc ? metalc14 D ZN ZN . A ZN 403 1_555 F OXT ACT . A ACT 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6ZGM _atom_sites.fract_transf_matrix[1][1] 0.014715 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012791 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012554 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN A 1 401 301 ZN ZN . C 2 ZN A 1 402 302 ZN ZN . D 2 ZN A 1 403 303 ZN ZN . E 3 ACT A 1 404 401 ACT ACT . F 3 ACT A 1 405 402 ACT ACT . G 4 QKK A 1 406 1 QKK AN8 . H 5 HOH A 1 501 134 HOH HOH . H 5 HOH A 2 502 95 HOH HOH . H 5 HOH A 3 503 86 HOH HOH . H 5 HOH A 4 504 119 HOH HOH . H 5 HOH A 5 505 46 HOH HOH . H 5 HOH A 6 506 111 HOH HOH . H 5 HOH A 7 507 159 HOH HOH . H 5 HOH A 8 508 60 HOH HOH . H 5 HOH A 9 509 117 HOH HOH . H 5 HOH A 10 510 7 HOH HOH . H 5 HOH A 11 511 103 HOH HOH . H 5 HOH A 12 512 92 HOH HOH . H 5 HOH A 13 513 45 HOH HOH . H 5 HOH A 14 514 43 HOH HOH . H 5 HOH A 15 515 113 HOH HOH . H 5 HOH A 16 516 66 HOH HOH . H 5 HOH A 17 517 153 HOH HOH . H 5 HOH A 18 518 78 HOH HOH . H 5 HOH A 19 519 115 HOH HOH . H 5 HOH A 20 520 37 HOH HOH . H 5 HOH A 21 521 100 HOH HOH . H 5 HOH A 22 522 106 HOH HOH . H 5 HOH A 23 523 102 HOH HOH . H 5 HOH A 24 524 121 HOH HOH . H 5 HOH A 25 525 70 HOH HOH . H 5 HOH A 26 526 24 HOH HOH . H 5 HOH A 27 527 31 HOH HOH . H 5 HOH A 28 528 94 HOH HOH . H 5 HOH A 29 529 6 HOH HOH . H 5 HOH A 30 530 91 HOH HOH . H 5 HOH A 31 531 97 HOH HOH . H 5 HOH A 32 532 109 HOH HOH . H 5 HOH A 33 533 69 HOH HOH . H 5 HOH A 34 534 139 HOH HOH . H 5 HOH A 35 535 82 HOH HOH . H 5 HOH A 36 536 8 HOH HOH . H 5 HOH A 37 537 17 HOH HOH . H 5 HOH A 38 538 114 HOH HOH . H 5 HOH A 39 539 14 HOH HOH . H 5 HOH A 40 540 116 HOH HOH . H 5 HOH A 41 541 48 HOH HOH . H 5 HOH A 42 542 64 HOH HOH . H 5 HOH A 43 543 2 HOH HOH . H 5 HOH A 44 544 22 HOH HOH . H 5 HOH A 45 545 38 HOH HOH . H 5 HOH A 46 546 141 HOH HOH . H 5 HOH A 47 547 112 HOH HOH . H 5 HOH A 48 548 11 HOH HOH . H 5 HOH A 49 549 33 HOH HOH . H 5 HOH A 50 550 12 HOH HOH . H 5 HOH A 51 551 3 HOH HOH . H 5 HOH A 52 552 120 HOH HOH . H 5 HOH A 53 553 40 HOH HOH . H 5 HOH A 54 554 53 HOH HOH . H 5 HOH A 55 555 90 HOH HOH . H 5 HOH A 56 556 72 HOH HOH . H 5 HOH A 57 557 56 HOH HOH . H 5 HOH A 58 558 20 HOH HOH . H 5 HOH A 59 559 73 HOH HOH . H 5 HOH A 60 560 51 HOH HOH . H 5 HOH A 61 561 42 HOH HOH . H 5 HOH A 62 562 57 HOH HOH . H 5 HOH A 63 563 18 HOH HOH . H 5 HOH A 64 564 5 HOH HOH . H 5 HOH A 65 565 58 HOH HOH . H 5 HOH A 66 566 16 HOH HOH . H 5 HOH A 67 567 28 HOH HOH . H 5 HOH A 68 568 1 HOH HOH . H 5 HOH A 69 569 59 HOH HOH . H 5 HOH A 70 570 99 HOH HOH . H 5 HOH A 71 571 34 HOH HOH . H 5 HOH A 72 572 67 HOH HOH . H 5 HOH A 73 573 76 HOH HOH . H 5 HOH A 74 574 74 HOH HOH . H 5 HOH A 75 575 62 HOH HOH . H 5 HOH A 76 576 21 HOH HOH . H 5 HOH A 77 577 4 HOH HOH . H 5 HOH A 78 578 35 HOH HOH . H 5 HOH A 79 579 13 HOH HOH . H 5 HOH A 80 580 30 HOH HOH . H 5 HOH A 81 581 118 HOH HOH . H 5 HOH A 82 582 107 HOH HOH . H 5 HOH A 83 583 88 HOH HOH . H 5 HOH A 84 584 163 HOH HOH . H 5 HOH A 85 585 105 HOH HOH . H 5 HOH A 86 586 49 HOH HOH . H 5 HOH A 87 587 68 HOH HOH . H 5 HOH A 88 588 156 HOH HOH . H 5 HOH A 89 589 27 HOH HOH . H 5 HOH A 90 590 61 HOH HOH . H 5 HOH A 91 591 29 HOH HOH . H 5 HOH A 92 592 36 HOH HOH . H 5 HOH A 93 593 63 HOH HOH . H 5 HOH A 94 594 138 HOH HOH . H 5 HOH A 95 595 84 HOH HOH . H 5 HOH A 96 596 9 HOH HOH . H 5 HOH A 97 597 126 HOH HOH . H 5 HOH A 98 598 41 HOH HOH . H 5 HOH A 99 599 150 HOH HOH . H 5 HOH A 100 600 96 HOH HOH . H 5 HOH A 101 601 157 HOH HOH . H 5 HOH A 102 602 47 HOH HOH . H 5 HOH A 103 603 25 HOH HOH . H 5 HOH A 104 604 162 HOH HOH . H 5 HOH A 105 605 169 HOH HOH . H 5 HOH A 106 606 10 HOH HOH . H 5 HOH A 107 607 15 HOH HOH . H 5 HOH A 108 608 19 HOH HOH . H 5 HOH A 109 609 87 HOH HOH . H 5 HOH A 110 610 26 HOH HOH . H 5 HOH A 111 611 93 HOH HOH . H 5 HOH A 112 612 98 HOH HOH . H 5 HOH A 113 613 152 HOH HOH . H 5 HOH A 114 614 44 HOH HOH . H 5 HOH A 115 615 89 HOH HOH . H 5 HOH A 116 616 154 HOH HOH . H 5 HOH A 117 617 149 HOH HOH . H 5 HOH A 118 618 136 HOH HOH . H 5 HOH A 119 619 122 HOH HOH . H 5 HOH A 120 620 83 HOH HOH . H 5 HOH A 121 621 39 HOH HOH . H 5 HOH A 122 622 155 HOH HOH . H 5 HOH A 123 623 32 HOH HOH . H 5 HOH A 124 624 127 HOH HOH . H 5 HOH A 125 625 85 HOH HOH . H 5 HOH A 126 626 108 HOH HOH . H 5 HOH A 127 627 160 HOH HOH . H 5 HOH A 128 628 164 HOH HOH . H 5 HOH A 129 629 140 HOH HOH . H 5 HOH A 130 630 79 HOH HOH . H 5 HOH A 131 631 50 HOH HOH . H 5 HOH A 132 632 151 HOH HOH . H 5 HOH A 133 633 110 HOH HOH . H 5 HOH A 134 634 71 HOH HOH . H 5 HOH A 135 635 75 HOH HOH . H 5 HOH A 136 636 170 HOH HOH . H 5 HOH A 137 637 171 HOH HOH . H 5 HOH A 138 638 144 HOH HOH . H 5 HOH A 139 639 81 HOH HOH . H 5 HOH A 140 640 23 HOH HOH . H 5 HOH A 141 641 133 HOH HOH . H 5 HOH A 142 642 142 HOH HOH . H 5 HOH A 143 643 147 HOH HOH . H 5 HOH A 144 644 55 HOH HOH . H 5 HOH A 145 645 148 HOH HOH . H 5 HOH A 146 646 104 HOH HOH . H 5 HOH A 147 647 166 HOH HOH . H 5 HOH A 148 648 146 HOH HOH . H 5 HOH A 149 649 123 HOH HOH . H 5 HOH A 150 650 161 HOH HOH . H 5 HOH A 151 651 101 HOH HOH . H 5 HOH A 152 652 143 HOH HOH . H 5 HOH A 153 653 128 HOH HOH . H 5 HOH A 154 654 145 HOH HOH . H 5 HOH A 155 655 135 HOH HOH . H 5 HOH A 156 656 129 HOH HOH . H 5 HOH A 157 657 165 HOH HOH . H 5 HOH A 158 658 137 HOH HOH . H 5 HOH A 159 659 80 HOH HOH . H 5 HOH A 160 660 125 HOH HOH . H 5 HOH A 161 661 168 HOH HOH . H 5 HOH A 162 662 54 HOH HOH . H 5 HOH A 163 663 158 HOH HOH . H 5 HOH A 164 664 124 HOH HOH . H 5 HOH A 165 665 52 HOH HOH . H 5 HOH A 166 666 130 HOH HOH . H 5 HOH A 167 667 132 HOH HOH . H 5 HOH A 168 668 77 HOH HOH . H 5 HOH A 169 669 65 HOH HOH . H 5 HOH A 170 670 131 HOH HOH . H 5 HOH A 171 671 167 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 2 _atom_site.Cartn_x -18.346 _atom_site.Cartn_y -15.121 _atom_site.Cartn_z 31.393 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 7.19 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 403 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #