data_6ZIB # _model_server_result.job_id 1hqTcMrqUKwlqFvyrEWIFw _model_server_result.datetime_utc '2025-06-23 18:05:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":801}' # _entry.id 6ZIB # _exptl.entry_id 6ZIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 851.607 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETOACETYL-COENZYME A' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZIB _cell.length_a 65.937 _cell.length_b 127.39 _cell.length_c 228.173 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C25 H40 N7 O18 P3 S' _chem_comp.formula_weight 851.607 _chem_comp.id CAA _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETOACETYL-COENZYME A' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1A C2A CAA sing 70 n y N1A C6A CAA doub 71 n y C2A N3A CAA doub 72 n y C2A H2A CAA sing 73 n n N3A C4A CAA sing 74 n y C4A C5A CAA doub 75 n y C4A N9A CAA sing 76 n y C5A C6A CAA sing 77 n y C5A N7A CAA sing 78 n y C6A N6A CAA sing 79 n n N6A H61A CAA sing 80 n n N6A H62A CAA sing 81 n n N7A C8A CAA doub 82 n y C8A N9A CAA sing 83 n y C8A H8A CAA sing 84 n n N9A C1B CAA sing 85 n n C1B C2B CAA sing 86 n n C1B O4B CAA sing 87 n n C1B H1B CAA sing 88 n n C2B O2B CAA sing 89 n n C2B C3B CAA sing 90 n n C2B H2B CAA sing 91 n n O2B HO2A CAA sing 92 n n C3B O3B CAA sing 93 n n C3B C4B CAA sing 94 n n C3B H3B CAA sing 95 n n O3B P3B CAA sing 96 n n P3B O7A CAA doub 97 n n P3B O8A CAA sing 98 n n P3B O9A CAA sing 99 n n O8A HOA8 CAA sing 100 n n O9A HOA9 CAA sing 101 n n C4B O4B CAA sing 102 n n C4B C5B CAA sing 103 n n C4B H4B CAA sing 104 n n C5B O5B CAA sing 105 n n C5B H51A CAA sing 106 n n C5B H52A CAA sing 107 n n O5B P1A CAA sing 108 n n P1A O1A CAA doub 109 n n P1A O2A CAA sing 110 n n P1A O3A CAA sing 111 n n O2A HOA2 CAA sing 112 n n O3A P2A CAA sing 113 n n P2A O4A CAA doub 114 n n P2A O5A CAA sing 115 n n P2A O6A CAA sing 116 n n O5A HOA5 CAA sing 117 n n O6A CCP CAA sing 118 n n CBP CCP CAA sing 119 n n CBP CDP CAA sing 120 n n CBP CEP CAA sing 121 n n CBP CAP CAA sing 122 n n CCP H121 CAA sing 123 n n CCP H122 CAA sing 124 n n CDP H131 CAA sing 125 n n CDP H132 CAA sing 126 n n CDP H133 CAA sing 127 n n CEP H141 CAA sing 128 n n CEP H142 CAA sing 129 n n CEP H143 CAA sing 130 n n CAP OAP CAA sing 131 n n CAP C9P CAA sing 132 n n CAP H10 CAA sing 133 n n OAP HO1 CAA sing 134 n n C9P O9P CAA doub 135 n n C9P N8P CAA sing 136 n n N8P C7P CAA sing 137 n n N8P HN8 CAA sing 138 n n C7P C6P CAA sing 139 n n C7P H71 CAA sing 140 n n C7P H72 CAA sing 141 n n C6P C5P CAA sing 142 n n C6P H61 CAA sing 143 n n C6P H62 CAA sing 144 n n C5P O5P CAA doub 145 n n C5P N4P CAA sing 146 n n N4P C3P CAA sing 147 n n N4P HN4 CAA sing 148 n n C3P C2P CAA sing 149 n n C3P H31 CAA sing 150 n n C3P H32 CAA sing 151 n n C2P S1P CAA sing 152 n n C2P H21 CAA sing 153 n n C2P H22 CAA sing 154 n n S1P C1 CAA sing 155 n n C1 O1 CAA doub 156 n n C1 C2 CAA sing 157 n n C2 C3 CAA sing 158 n n C2 "H2'1" CAA sing 159 n n C2 "H2'2" CAA sing 160 n n C3 O3 CAA doub 161 n n C3 C4 CAA sing 162 n n C4 "H4'1" CAA sing 163 n n C4 "H4'2" CAA sing 164 n n C4 "H4'3" CAA sing 165 n n # _atom_sites.entry_id 6ZIB _atom_sites.fract_transf_matrix[1][1] 0.015166 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CAA AAA 1 901 901 CAA CAA . D 3 NAI AAA 1 902 1001 NAI NAI . E 4 SO4 AAA 1 903 3 SO4 SO4 . F 2 CAA BBB 1 801 801 CAA CAA . G 3 NAI BBB 1 802 901 NAI NAI . H 4 SO4 BBB 1 803 4 SO4 SO4 . I 5 HOH AAA 1 1001 25 HOH HOH . I 5 HOH AAA 2 1002 35 HOH HOH . I 5 HOH AAA 3 1003 51 HOH HOH . I 5 HOH AAA 4 1004 46 HOH HOH . I 5 HOH AAA 5 1005 4 HOH HOH . I 5 HOH AAA 6 1006 28 HOH HOH . I 5 HOH AAA 7 1007 44 HOH HOH . I 5 HOH AAA 8 1008 3 HOH HOH . I 5 HOH AAA 9 1009 14 HOH HOH . I 5 HOH AAA 10 1010 55 HOH HOH . I 5 HOH AAA 11 1011 21 HOH HOH . I 5 HOH AAA 12 1012 5 HOH HOH . I 5 HOH AAA 13 1013 73 HOH HOH . I 5 HOH AAA 14 1014 66 HOH HOH . I 5 HOH AAA 15 1015 53 HOH HOH . I 5 HOH AAA 16 1016 58 HOH HOH . I 5 HOH AAA 17 1017 61 HOH HOH . I 5 HOH AAA 18 1018 20 HOH HOH . I 5 HOH AAA 19 1019 27 HOH HOH . I 5 HOH AAA 20 1020 40 HOH HOH . I 5 HOH AAA 21 1021 48 HOH HOH . I 5 HOH AAA 22 1022 16 HOH HOH . I 5 HOH AAA 23 1023 29 HOH HOH . I 5 HOH AAA 24 1024 39 HOH HOH . I 5 HOH AAA 25 1025 22 HOH HOH . I 5 HOH AAA 26 1026 38 HOH HOH . I 5 HOH AAA 27 1027 63 HOH HOH . I 5 HOH AAA 28 1028 36 HOH HOH . I 5 HOH AAA 29 1029 7 HOH HOH . I 5 HOH AAA 30 1030 10 HOH HOH . I 5 HOH AAA 31 1031 41 HOH HOH . I 5 HOH AAA 32 1032 68 HOH HOH . I 5 HOH AAA 33 1033 52 HOH HOH . I 5 HOH AAA 34 1034 65 HOH HOH . I 5 HOH AAA 35 1035 37 HOH HOH . I 5 HOH AAA 36 1036 9 HOH HOH . I 5 HOH AAA 37 1037 32 HOH HOH . I 5 HOH AAA 38 1038 69 HOH HOH . I 5 HOH AAA 39 1039 54 HOH HOH . I 5 HOH AAA 40 1040 30 HOH HOH . I 5 HOH AAA 41 1041 23 HOH HOH . I 5 HOH AAA 42 1042 31 HOH HOH . I 5 HOH AAA 43 1043 6 HOH HOH . I 5 HOH AAA 44 1044 70 HOH HOH . I 5 HOH AAA 45 1045 72 HOH HOH . I 5 HOH AAA 46 1046 15 HOH HOH . I 5 HOH AAA 47 1047 24 HOH HOH . I 5 HOH AAA 48 1048 67 HOH HOH . J 5 HOH BBB 1 901 71 HOH HOH . J 5 HOH BBB 2 902 64 HOH HOH . J 5 HOH BBB 3 903 13 HOH HOH . J 5 HOH BBB 4 904 17 HOH HOH . J 5 HOH BBB 5 905 33 HOH HOH . J 5 HOH BBB 6 906 19 HOH HOH . J 5 HOH BBB 7 907 50 HOH HOH . J 5 HOH BBB 8 908 2 HOH HOH . J 5 HOH BBB 9 909 8 HOH HOH . J 5 HOH BBB 10 910 12 HOH HOH . J 5 HOH BBB 11 911 1 HOH HOH . J 5 HOH BBB 12 912 49 HOH HOH . J 5 HOH BBB 13 913 42 HOH HOH . J 5 HOH BBB 14 914 57 HOH HOH . J 5 HOH BBB 15 915 62 HOH HOH . J 5 HOH BBB 16 916 18 HOH HOH . J 5 HOH BBB 17 917 11 HOH HOH . J 5 HOH BBB 18 918 59 HOH HOH . J 5 HOH BBB 19 919 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1A CAA . . . F 2 -21.792 -19.419 93.578 1 78.62 ? N1A CAA 801 BBB 1 HETATM 2 C C2A CAA . . . F 2 -22.889 -20.135 93.858 1 74.89 ? C2A CAA 801 BBB 1 HETATM 3 N N3A CAA . . . F 2 -23.373 -21.209 93.238 1 75.7 ? N3A CAA 801 BBB 1 HETATM 4 C C4A CAA . . . F 2 -22.592 -21.55 92.197 1 79.89 ? C4A CAA 801 BBB 1 HETATM 5 C C5A CAA . . . F 2 -21.44 -20.914 91.781 1 82.06 ? C5A CAA 801 BBB 1 HETATM 6 C C6A CAA . . . F 2 -21.027 -19.785 92.519 1 82.2 ? C6A CAA 801 BBB 1 HETATM 7 N N6A CAA . . . F 2 -19.94 -19.071 92.237 1 83.89 ? N6A CAA 801 BBB 1 HETATM 8 N N7A CAA . . . F 2 -20.907 -21.556 90.669 1 79.54 ? N7A CAA 801 BBB 1 HETATM 9 C C8A CAA . . . F 2 -21.729 -22.552 90.435 1 78.62 ? C8A CAA 801 BBB 1 HETATM 10 N N9A CAA . . . F 2 -22.772 -22.594 91.328 1 79.05 ? N9A CAA 801 BBB 1 HETATM 11 C C1B CAA . . . F 2 -23.846 -23.57 91.354 1 79.56 ? C1B CAA 801 BBB 1 HETATM 12 C C2B CAA . . . F 2 -24.595 -23.644 90.025 1 80.14 ? C2B CAA 801 BBB 1 HETATM 13 O O2B CAA . . . F 2 -25.755 -22.84 90.004 1 83.97 ? O2B CAA 801 BBB 1 HETATM 14 C C3B CAA . . . F 2 -24.931 -25.133 89.904 1 80.07 ? C3B CAA 801 BBB 1 HETATM 15 O O3B CAA . . . F 2 -26.195 -25.384 90.515 1 83.35 ? O3B CAA 801 BBB 1 HETATM 16 P P3B CAA . . . F 2 -26.84 -26.789 90.065 1 80.81 ? P3B CAA 801 BBB 1 HETATM 17 O O7A CAA . . . F 2 -28.341 -26.581 90.147 1 81.32 ? O7A CAA 801 BBB 1 HETATM 18 O O8A CAA . . . F 2 -26.384 -27.125 88.656 1 79.16 ? O8A CAA 801 BBB 1 HETATM 19 O O9A CAA . . . F 2 -26.339 -27.786 91.093 1 84.43 ? O9A CAA 801 BBB 1 HETATM 20 C C4B CAA . . . F 2 -23.809 -25.824 90.673 1 76.95 ? C4B CAA 801 BBB 1 HETATM 21 O O4B CAA . . . F 2 -23.249 -24.829 91.566 1 77.24 ? O4B CAA 801 BBB 1 HETATM 22 C C5B CAA . . . F 2 -22.706 -26.442 89.843 1 74.23 ? C5B CAA 801 BBB 1 HETATM 23 O O5B CAA . . . F 2 -22.217 -25.482 88.872 1 75.71 ? O5B CAA 801 BBB 1 HETATM 24 P P1A CAA . . . F 2 -22.048 -25.941 87.343 1 75.63 ? P1A CAA 801 BBB 1 HETATM 25 O O1A CAA . . . F 2 -22.352 -27.396 87.226 1 79.84 ? O1A CAA 801 BBB 1 HETATM 26 O O2A CAA . . . F 2 -22.752 -24.985 86.443 1 74.12 ? O2A CAA 801 BBB 1 HETATM 27 O O3A CAA . . . F 2 -20.48 -25.719 87.124 1 82.04 ? O3A CAA 801 BBB 1 HETATM 28 P P2A CAA . . . F 2 -19.28 -26.616 86.557 1 83.82 ? P2A CAA 801 BBB 1 HETATM 29 O O4A CAA . . . F 2 -19.334 -27.961 87.203 1 80.42 ? O4A CAA 801 BBB 1 HETATM 30 O O5A CAA . . . F 2 -19.264 -26.522 85.066 1 76.45 ? O5A CAA 801 BBB 1 HETATM 31 O O6A CAA . . . F 2 -18.03 -25.818 87.181 1 87.95 ? O6A CAA 801 BBB 1 HETATM 32 C CBP CAA . . . F 2 -17.387 -23.45 87.127 1 89.75 ? CBP CAA 801 BBB 1 HETATM 33 C CCP CAA . . . F 2 -17.361 -24.791 86.391 1 89.67 ? CCP CAA 801 BBB 1 HETATM 34 C CDP CAA . . . F 2 -16.229 -22.599 86.599 1 86.75 ? CDP CAA 801 BBB 1 HETATM 35 C CEP CAA . . . F 2 -17.175 -23.674 88.63 1 85.62 ? CEP CAA 801 BBB 1 HETATM 36 C CAP CAA . . . F 2 -18.723 -22.723 86.888 1 91.47 ? CAP CAA 801 BBB 1 HETATM 37 O OAP CAA . . . F 2 -19.742 -23.257 87.728 1 95.83 ? OAP CAA 801 BBB 1 HETATM 38 C C9P CAA . . . F 2 -18.7 -21.207 87.026 1 87.86 ? C9P CAA 801 BBB 1 HETATM 39 O O9P CAA . . . F 2 -18.215 -20.518 86.131 1 86.29 ? O9P CAA 801 BBB 1 HETATM 40 N N8P CAA . . . F 2 -19.237 -20.694 88.126 1 85.84 ? N8P CAA 801 BBB 1 HETATM 41 C C7P CAA . . . F 2 -19.417 -19.266 88.349 1 79.94 ? C7P CAA 801 BBB 1 HETATM 42 C C6P CAA . . . F 2 -18.298 -18.669 89.171 1 76.51 ? C6P CAA 801 BBB 1 HETATM 43 C C5P CAA . . . F 2 -18.571 -17.225 89.532 1 74.83 ? C5P CAA 801 BBB 1 HETATM 44 O O5P CAA . . . F 2 -19.026 -16.446 88.699 1 74.32 ? O5P CAA 801 BBB 1 HETATM 45 N N4P CAA . . . F 2 -18.277 -16.84 90.78 1 75.25 ? N4P CAA 801 BBB 1 HETATM 46 C C3P CAA . . . F 2 -18.946 -15.739 91.456 1 76.17 ? C3P CAA 801 BBB 1 HETATM 47 C C2P CAA . . . F 2 -17.998 -14.853 92.222 1 76.22 ? C2P CAA 801 BBB 1 HETATM 48 S S1P CAA . . . F 2 -18.916 -13.471 92.95 1 79 ? S1P CAA 801 BBB 1 HETATM 49 C C1 CAA . . . F 2 -17.914 -13.065 94.347 1 77.03 ? C1 CAA 801 BBB 1 HETATM 50 O O1 CAA . . . F 2 -17.048 -13.786 94.772 1 79.29 ? O1 CAA 801 BBB 1 HETATM 51 C C2 CAA . . . F 2 -18.272 -11.734 94.955 1 74.59 ? C2 CAA 801 BBB 1 HETATM 52 C C3 CAA . . . F 2 -17.248 -11.116 95.857 1 70.22 ? C3 CAA 801 BBB 1 HETATM 53 O O3 CAA . . . F 2 -16.184 -10.724 95.424 1 63.9 ? O3 CAA 801 BBB 1 HETATM 54 C C4 CAA . . . F 2 -17.597 -10.973 97.309 1 67.94 ? C4 CAA 801 BBB 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 54 #