data_6ZIB # _model_server_result.job_id k88ic1LuLcez04FS0uVmzA _model_server_result.datetime_utc '2024-11-25 15:35:21' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zib # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":802}' # _entry.id 6ZIB # _exptl.entry_id 6ZIB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 665.441 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6ZIB _cell.length_a 65.937 _cell.length_b 127.39 _cell.length_c 228.173 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZIB _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 G N N # _chem_comp.formula 'C21 H29 N7 O14 P2' _chem_comp.formula_weight 665.441 _chem_comp.id NAI _chem_comp.mon_nstd_flag . _chem_comp.name '1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms NADH # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAI doub 333 n n PA O2A NAI sing 334 n n PA O5B NAI sing 335 n n PA O3 NAI sing 336 n n O2A HOA2 NAI sing 337 n n O5B C5B NAI sing 338 n n C5B C4B NAI sing 339 n n C5B H51A NAI sing 340 n n C5B H52A NAI sing 341 n n C4B O4B NAI sing 342 n n C4B C3B NAI sing 343 n n C4B H4B NAI sing 344 n n O4B C1B NAI sing 345 n n C3B O3B NAI sing 346 n n C3B C2B NAI sing 347 n n C3B H3B NAI sing 348 n n O3B HO3A NAI sing 349 n n C2B O2B NAI sing 350 n n C2B C1B NAI sing 351 n n C2B H2B NAI sing 352 n n O2B HO2A NAI sing 353 n n C1B N9A NAI sing 354 n n C1B H1B NAI sing 355 n n N9A C8A NAI sing 356 n y N9A C4A NAI sing 357 n y C8A N7A NAI doub 358 n y C8A H8A NAI sing 359 n n N7A C5A NAI sing 360 n y C5A C6A NAI sing 361 n y C5A C4A NAI doub 362 n y C6A N6A NAI sing 363 n n C6A N1A NAI doub 364 n y N6A H61A NAI sing 365 n n N6A H62A NAI sing 366 n n N1A C2A NAI sing 367 n y C2A N3A NAI doub 368 n y C2A H2A NAI sing 369 n n N3A C4A NAI sing 370 n y O3 PN NAI sing 371 n n PN O1N NAI sing 372 n n PN O2N NAI doub 373 n n PN O5D NAI sing 374 n n O1N HO1N NAI sing 375 n n O5D C5D NAI sing 376 n n C5D C4D NAI sing 377 n n C5D H51N NAI sing 378 n n C5D H52N NAI sing 379 n n C4D O4D NAI sing 380 n n C4D C3D NAI sing 381 n n C4D H4D NAI sing 382 n n O4D C1D NAI sing 383 n n C3D O3D NAI sing 384 n n C3D C2D NAI sing 385 n n C3D H3D NAI sing 386 n n O3D HO3N NAI sing 387 n n C2D O2D NAI sing 388 n n C2D C1D NAI sing 389 n n C2D H2D NAI sing 390 n n O2D HO2N NAI sing 391 n n C1D N1N NAI sing 392 n n C1D H1D NAI sing 393 n n N1N C2N NAI sing 394 n n N1N C6N NAI sing 395 n n C2N C3N NAI doub 396 n n C2N H2N NAI sing 397 n n C3N C7N NAI sing 398 n n C3N C4N NAI sing 399 n n C7N O7N NAI doub 400 n n C7N N7N NAI sing 401 n n N7N H71N NAI sing 402 n n N7N H72N NAI sing 403 n n C4N C5N NAI sing 404 n n C4N H4N NAI sing 405 n n C4N H42N NAI sing 406 n n C5N C6N NAI doub 407 n n C5N H5N NAI sing 408 n n C6N H6N NAI sing 409 n n # _atom_sites.entry_id 6ZIB _atom_sites.fract_transf_matrix[1][1] 0.015166 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00785 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.004383 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CAA AAA 1 901 901 CAA CAA . D 3 NAI AAA 1 902 1001 NAI NAI . E 4 SO4 AAA 1 903 3 SO4 SO4 . F 2 CAA BBB 1 801 801 CAA CAA . G 3 NAI BBB 1 802 901 NAI NAI . H 4 SO4 BBB 1 803 4 SO4 SO4 . I 5 HOH AAA 1 1001 25 HOH HOH . I 5 HOH AAA 2 1002 35 HOH HOH . I 5 HOH AAA 3 1003 51 HOH HOH . I 5 HOH AAA 4 1004 46 HOH HOH . I 5 HOH AAA 5 1005 4 HOH HOH . I 5 HOH AAA 6 1006 28 HOH HOH . I 5 HOH AAA 7 1007 44 HOH HOH . I 5 HOH AAA 8 1008 3 HOH HOH . I 5 HOH AAA 9 1009 14 HOH HOH . I 5 HOH AAA 10 1010 55 HOH HOH . I 5 HOH AAA 11 1011 21 HOH HOH . I 5 HOH AAA 12 1012 5 HOH HOH . I 5 HOH AAA 13 1013 73 HOH HOH . I 5 HOH AAA 14 1014 66 HOH HOH . I 5 HOH AAA 15 1015 53 HOH HOH . I 5 HOH AAA 16 1016 58 HOH HOH . I 5 HOH AAA 17 1017 61 HOH HOH . I 5 HOH AAA 18 1018 20 HOH HOH . I 5 HOH AAA 19 1019 27 HOH HOH . I 5 HOH AAA 20 1020 40 HOH HOH . I 5 HOH AAA 21 1021 48 HOH HOH . I 5 HOH AAA 22 1022 16 HOH HOH . I 5 HOH AAA 23 1023 29 HOH HOH . I 5 HOH AAA 24 1024 39 HOH HOH . I 5 HOH AAA 25 1025 22 HOH HOH . I 5 HOH AAA 26 1026 38 HOH HOH . I 5 HOH AAA 27 1027 63 HOH HOH . I 5 HOH AAA 28 1028 36 HOH HOH . I 5 HOH AAA 29 1029 7 HOH HOH . I 5 HOH AAA 30 1030 10 HOH HOH . I 5 HOH AAA 31 1031 41 HOH HOH . I 5 HOH AAA 32 1032 68 HOH HOH . I 5 HOH AAA 33 1033 52 HOH HOH . I 5 HOH AAA 34 1034 65 HOH HOH . I 5 HOH AAA 35 1035 37 HOH HOH . I 5 HOH AAA 36 1036 9 HOH HOH . I 5 HOH AAA 37 1037 32 HOH HOH . I 5 HOH AAA 38 1038 69 HOH HOH . I 5 HOH AAA 39 1039 54 HOH HOH . I 5 HOH AAA 40 1040 30 HOH HOH . I 5 HOH AAA 41 1041 23 HOH HOH . I 5 HOH AAA 42 1042 31 HOH HOH . I 5 HOH AAA 43 1043 6 HOH HOH . I 5 HOH AAA 44 1044 70 HOH HOH . I 5 HOH AAA 45 1045 72 HOH HOH . I 5 HOH AAA 46 1046 15 HOH HOH . I 5 HOH AAA 47 1047 24 HOH HOH . I 5 HOH AAA 48 1048 67 HOH HOH . J 5 HOH BBB 1 901 71 HOH HOH . J 5 HOH BBB 2 902 64 HOH HOH . J 5 HOH BBB 3 903 13 HOH HOH . J 5 HOH BBB 4 904 17 HOH HOH . J 5 HOH BBB 5 905 33 HOH HOH . J 5 HOH BBB 6 906 19 HOH HOH . J 5 HOH BBB 7 907 50 HOH HOH . J 5 HOH BBB 8 908 2 HOH HOH . J 5 HOH BBB 9 909 8 HOH HOH . J 5 HOH BBB 10 910 12 HOH HOH . J 5 HOH BBB 11 911 1 HOH HOH . J 5 HOH BBB 12 912 49 HOH HOH . J 5 HOH BBB 13 913 42 HOH HOH . J 5 HOH BBB 14 914 57 HOH HOH . J 5 HOH BBB 15 915 62 HOH HOH . J 5 HOH BBB 16 916 18 HOH HOH . J 5 HOH BBB 17 917 11 HOH HOH . J 5 HOH BBB 18 918 59 HOH HOH . J 5 HOH BBB 19 919 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAI . . . G 3 -28.225 -27.177 53.048 1 114.14 ? PA NAI 802 BBB 1 HETATM 2 O O1A NAI . . . G 3 -29.05 -27.281 51.783 1 110.82 ? O1A NAI 802 BBB 1 HETATM 3 O O2A NAI . . . G 3 -27.098 -26.171 53.109 1 115.49 ? O2A NAI 802 BBB 1 HETATM 4 O O5B NAI . . . G 3 -27.615 -28.626 53.405 1 114.73 ? O5B NAI 802 BBB 1 HETATM 5 C C5B NAI . . . G 3 -28.254 -29.848 53.038 1 112.17 ? C5B NAI 802 BBB 1 HETATM 6 C C4B NAI . . . G 3 -27.172 -30.841 52.63 1 108.56 ? C4B NAI 802 BBB 1 HETATM 7 O O4B NAI . . . G 3 -27.6 -32.19 52.846 1 109.1 ? O4B NAI 802 BBB 1 HETATM 8 C C3B NAI . . . G 3 -26.825 -30.711 51.154 1 108.67 ? C3B NAI 802 BBB 1 HETATM 9 O O3B NAI . . . G 3 -25.417 -30.483 51.032 1 107.41 ? O3B NAI 802 BBB 1 HETATM 10 C C2B NAI . . . G 3 -27.215 -32.043 50.536 1 107.95 ? C2B NAI 802 BBB 1 HETATM 11 O O2B NAI . . . G 3 -26.293 -32.47 49.529 1 110.69 ? O2B NAI 802 BBB 1 HETATM 12 C C1B NAI . . . G 3 -27.195 -32.985 51.727 1 106.99 ? C1B NAI 802 BBB 1 HETATM 13 N N9A NAI . . . G 3 -28.036 -34.197 51.526 1 105.25 ? N9A NAI 802 BBB 1 HETATM 14 C C8A NAI . . . G 3 -29.28 -34.274 51.01 1 103.54 ? C8A NAI 802 BBB 1 HETATM 15 N N7A NAI . . . G 3 -29.719 -35.56 50.985 1 102.09 ? N7A NAI 802 BBB 1 HETATM 16 C C5A NAI . . . G 3 -28.738 -36.329 51.494 1 104.98 ? C5A NAI 802 BBB 1 HETATM 17 C C6A NAI . . . G 3 -28.526 -37.775 51.763 1 107.19 ? C6A NAI 802 BBB 1 HETATM 18 N N6A NAI . . . G 3 -29.484 -38.69 51.471 1 109.43 ? N6A NAI 802 BBB 1 HETATM 19 N N1A NAI . . . G 3 -27.341 -38.153 52.31 1 105.95 ? N1A NAI 802 BBB 1 HETATM 20 C C2A NAI . . . G 3 -26.373 -37.264 52.61 1 102.63 ? C2A NAI 802 BBB 1 HETATM 21 N N3A NAI . . . G 3 -26.498 -35.943 52.391 1 104.48 ? N3A NAI 802 BBB 1 HETATM 22 C C4A NAI . . . G 3 -27.632 -35.425 51.847 1 104.74 ? C4A NAI 802 BBB 1 HETATM 23 O O3 NAI . . . G 3 -29.218 -26.927 54.301 1 113.34 ? O3 NAI 802 BBB 1 HETATM 24 P PN NAI . . . G 3 -28.712 -26.552 55.793 1 111.91 ? PN NAI 802 BBB 1 HETATM 25 O O1N NAI . . . G 3 -27.535 -27.422 56.18 1 112.47 ? O1N NAI 802 BBB 1 HETATM 26 O O2N NAI . . . G 3 -28.605 -25.048 55.887 1 109.76 ? O2N NAI 802 BBB 1 HETATM 27 O O5D NAI . . . G 3 -29.969 -26.989 56.696 1 105.5 ? O5D NAI 802 BBB 1 HETATM 28 C C5D NAI . . . G 3 -30.456 -28.326 56.673 1 97.15 ? C5D NAI 802 BBB 1 HETATM 29 C C4D NAI . . . G 3 -31.502 -28.503 57.764 1 94.02 ? C4D NAI 802 BBB 1 HETATM 30 O O4D NAI . . . G 3 -31.152 -27.731 58.915 1 95.06 ? O4D NAI 802 BBB 1 HETATM 31 C C3D NAI . . . G 3 -32.873 -28.039 57.301 1 92.45 ? C3D NAI 802 BBB 1 HETATM 32 O O3D NAI . . . G 3 -33.8 -29.107 57.518 1 92.28 ? O3D NAI 802 BBB 1 HETATM 33 C C2D NAI . . . G 3 -33.221 -26.844 58.168 1 93.6 ? C2D NAI 802 BBB 1 HETATM 34 O O2D NAI . . . G 3 -34.572 -26.908 58.627 1 95.41 ? O2D NAI 802 BBB 1 HETATM 35 C C1D NAI . . . G 3 -32.284 -26.973 59.357 1 93.92 ? C1D NAI 802 BBB 1 HETATM 36 N N1N NAI . . . G 3 -31.901 -25.687 59.966 1 92.42 ? N1N NAI 802 BBB 1 HETATM 37 C C2N NAI . . . G 3 -31.262 -24.722 59.276 1 91.24 ? C2N NAI 802 BBB 1 HETATM 38 C C3N NAI . . . G 3 -30.896 -23.508 59.876 1 92.13 ? C3N NAI 802 BBB 1 HETATM 39 C C7N NAI . . . G 3 -30.176 -22.447 59.086 1 92.82 ? C7N NAI 802 BBB 1 HETATM 40 O O7N NAI . . . G 3 -30.022 -21.332 59.565 1 89.29 ? O7N NAI 802 BBB 1 HETATM 41 N N7N NAI . . . G 3 -29.703 -22.743 57.876 1 95.86 ? N7N NAI 802 BBB 1 HETATM 42 C C4N NAI . . . G 3 -31.209 -23.232 61.334 1 90.88 ? C4N NAI 802 BBB 1 HETATM 43 C C5N NAI . . . G 3 -31.9 -24.353 61.962 1 91.54 ? C5N NAI 802 BBB 1 HETATM 44 C C6N NAI . . . G 3 -32.209 -25.515 61.261 1 91.36 ? C6N NAI 802 BBB 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 289 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 44 #