data_6ZJ1 # _model_server_result.job_id liNWkean1MpK4zk5QEXWHQ _model_server_result.datetime_utc '2024-11-06 03:02:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6zj1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 6ZJ1 # _exptl.entry_id 6ZJ1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 1614.626 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-tungstotellurate(VI) _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6ZJ1 _cell.length_a 129.414 _cell.length_b 129.414 _cell.length_c 50.201 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ZJ1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 62' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 E N N # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 2 2 1 MAN MMA C1 O1 . O2 HO2 . sing 2 ? 2 3 2 MAN MAN C1 O1 . O2 HO2 . sing 3 ? 2 4 3 GLC MAN C1 O1 . O3 HO3 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 2 n B MMA 1 AdA 1 MMA AdA 507 MMA 2 n B MAN 2 AdA 2 MAN AeA 506 MAN 2 n B MAN 3 AdA 3 MAN AfA 505 MAN 2 n B GLC 4 AdA 4 GLC AgA 504 GLC # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 B O2 MMA . AdA MMA 1 1_555 B C1 MAN . AdA MAN 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale2 B O2 MAN . AdA MAN 2 1_555 B C1 MAN . AdA MAN 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.449 ? covale ? covale3 B O3 MAN . AdA MAN 3 1_555 B C1 GLC . AdA GLC 4 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.457 ? metalc ? metalc1 C MG MG . AAA MG 501 1_555 D O2 TEW . AAA TEW 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.225 ? metalc ? metalc2 C MG MG . AAA MG 501 1_555 F O HOH . AAA HOH 613 6_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? # _chem_comp.formula 'O24 Te W6 -6' _chem_comp.formula_weight 1614.626 _chem_comp.id TEW _chem_comp.mon_nstd_flag . _chem_comp.name 6-tungstotellurate(VI) _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 TE1 TEW sing 365 n n O1 W1 TEW sing 366 n n O1 W2 TEW sing 367 n n O2 TE1 TEW sing 368 n n O2 W1 TEW sing 369 n n O2 W3 TEW sing 370 n n O3 W1 TEW sing 371 n n O3 W2 TEW sing 372 n n O4 W1 TEW sing 373 n n O4 W3 TEW sing 374 n n O5 W1 TEW sing 375 n n O6 W1 TEW doub 376 n n O7 TE1 TEW sing 377 n n O7 W2 TEW sing 378 n n O7 W4 TEW sing 379 n n O8 W2 TEW doub 380 n n O9 W2 TEW sing 381 n n O10 W2 TEW sing 382 n n O10 W4 TEW sing 383 n n O11 TE1 TEW sing 384 n n O11 W5 TEW sing 385 n n O11 W6 TEW sing 386 n n O12 TE1 TEW sing 387 n n O12 W4 TEW sing 388 n n O12 W5 TEW sing 389 n n O13 TE1 TEW sing 390 n n O13 W3 TEW sing 391 n n O13 W6 TEW sing 392 n n O14 W3 TEW sing 393 n n O14 W6 TEW sing 394 n n O15 W3 TEW doub 395 n n O16 W3 TEW sing 396 n n O17 W4 TEW sing 397 n n O17 W5 TEW sing 398 n n O18 W4 TEW doub 399 n n O19 W4 TEW sing 400 n n O20 W5 TEW sing 401 n n O20 W6 TEW sing 402 n n O21 W5 TEW doub 403 n n O22 W5 TEW sing 404 n n O23 W6 TEW doub 405 n n O31 W6 TEW sing 406 n n # _atom_sites.entry_id 6ZJ1 _atom_sites.fract_transf_matrix[1][1] 0.007727 _atom_sites.fract_transf_matrix[1][2] 0.004461 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008923 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01992 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 MG AAA 1 501 501 MG MG . D 4 TEW AAA 1 502 502 TEW TEW . E 4 TEW AAA 1 503 503 TEW TEW . F 5 HOH AAA 1 601 610 HOH HOH . F 5 HOH AAA 2 602 608 HOH HOH . F 5 HOH AAA 3 603 717 HOH HOH . F 5 HOH AAA 4 604 609 HOH HOH . F 5 HOH AAA 5 605 606 HOH HOH . F 5 HOH AAA 6 606 658 HOH HOH . F 5 HOH AAA 7 607 649 HOH HOH . F 5 HOH AAA 8 608 652 HOH HOH . F 5 HOH AAA 9 609 643 HOH HOH . F 5 HOH AAA 10 610 687 HOH HOH . F 5 HOH AAA 11 611 714 HOH HOH . F 5 HOH AAA 12 612 629 HOH HOH . F 5 HOH AAA 13 613 680 HOH HOH . F 5 HOH AAA 14 614 721 HOH HOH . F 5 HOH AAA 15 615 612 HOH HOH . F 5 HOH AAA 16 616 644 HOH HOH . F 5 HOH AAA 17 617 663 HOH HOH . F 5 HOH AAA 18 618 619 HOH HOH . F 5 HOH AAA 19 619 625 HOH HOH . F 5 HOH AAA 20 620 711 HOH HOH . F 5 HOH AAA 21 621 718 HOH HOH . F 5 HOH AAA 22 622 682 HOH HOH . F 5 HOH AAA 23 623 692 HOH HOH . F 5 HOH AAA 24 624 620 HOH HOH . F 5 HOH AAA 25 625 611 HOH HOH . F 5 HOH AAA 26 626 690 HOH HOH . F 5 HOH AAA 27 627 685 HOH HOH . F 5 HOH AAA 28 628 728 HOH HOH . F 5 HOH AAA 29 629 726 HOH HOH . F 5 HOH AAA 30 630 637 HOH HOH . F 5 HOH AAA 31 631 645 HOH HOH . F 5 HOH AAA 32 632 700 HOH HOH . F 5 HOH AAA 33 633 729 HOH HOH . F 5 HOH AAA 34 634 722 HOH HOH . F 5 HOH AAA 35 635 694 HOH HOH . F 5 HOH AAA 36 636 732 HOH HOH . F 5 HOH AAA 37 637 661 HOH HOH . F 5 HOH AAA 38 638 688 HOH HOH . F 5 HOH AAA 39 639 632 HOH HOH . F 5 HOH AAA 40 640 725 HOH HOH . F 5 HOH AAA 41 641 630 HOH HOH . F 5 HOH AAA 42 642 670 HOH HOH . F 5 HOH AAA 43 643 669 HOH HOH . F 5 HOH AAA 44 644 602 HOH HOH . F 5 HOH AAA 45 645 702 HOH HOH . F 5 HOH AAA 46 646 634 HOH HOH . F 5 HOH AAA 47 647 689 HOH HOH . F 5 HOH AAA 48 648 614 HOH HOH . F 5 HOH AAA 49 649 675 HOH HOH . F 5 HOH AAA 50 650 659 HOH HOH . F 5 HOH AAA 51 651 693 HOH HOH . F 5 HOH AAA 52 652 627 HOH HOH . F 5 HOH AAA 53 653 691 HOH HOH . F 5 HOH AAA 54 654 695 HOH HOH . F 5 HOH AAA 55 655 617 HOH HOH . F 5 HOH AAA 56 656 720 HOH HOH . F 5 HOH AAA 57 657 674 HOH HOH . F 5 HOH AAA 58 658 686 HOH HOH . F 5 HOH AAA 59 659 665 HOH HOH . F 5 HOH AAA 60 660 623 HOH HOH . F 5 HOH AAA 61 661 697 HOH HOH . F 5 HOH AAA 62 662 671 HOH HOH . F 5 HOH AAA 63 663 698 HOH HOH . F 5 HOH AAA 64 664 657 HOH HOH . F 5 HOH AAA 65 665 701 HOH HOH . F 5 HOH AAA 66 666 713 HOH HOH . F 5 HOH AAA 67 667 653 HOH HOH . F 5 HOH AAA 68 668 624 HOH HOH . F 5 HOH AAA 69 669 616 HOH HOH . F 5 HOH AAA 70 670 696 HOH HOH . F 5 HOH AAA 71 671 655 HOH HOH . F 5 HOH AAA 72 672 723 HOH HOH . F 5 HOH AAA 73 673 638 HOH HOH . F 5 HOH AAA 74 674 673 HOH HOH . F 5 HOH AAA 75 675 733 HOH HOH . F 5 HOH AAA 76 676 633 HOH HOH . F 5 HOH AAA 77 677 727 HOH HOH . F 5 HOH AAA 78 678 618 HOH HOH . F 5 HOH AAA 79 679 667 HOH HOH . F 5 HOH AAA 80 680 719 HOH HOH . F 5 HOH AAA 81 681 605 HOH HOH . F 5 HOH AAA 82 682 640 HOH HOH . F 5 HOH AAA 83 683 706 HOH HOH . F 5 HOH AAA 84 684 613 HOH HOH . F 5 HOH AAA 85 685 648 HOH HOH . F 5 HOH AAA 86 686 679 HOH HOH . F 5 HOH AAA 87 687 621 HOH HOH . F 5 HOH AAA 88 688 678 HOH HOH . F 5 HOH AAA 89 689 699 HOH HOH . F 5 HOH AAA 90 690 622 HOH HOH . F 5 HOH AAA 91 691 676 HOH HOH . F 5 HOH AAA 92 692 662 HOH HOH . F 5 HOH AAA 93 693 654 HOH HOH . F 5 HOH AAA 94 694 707 HOH HOH . F 5 HOH AAA 95 695 731 HOH HOH . F 5 HOH AAA 96 696 672 HOH HOH . F 5 HOH AAA 97 697 677 HOH HOH . F 5 HOH AAA 98 698 603 HOH HOH . F 5 HOH AAA 99 699 668 HOH HOH . F 5 HOH AAA 100 700 626 HOH HOH . F 5 HOH AAA 101 701 724 HOH HOH . F 5 HOH AAA 102 702 628 HOH HOH . F 5 HOH AAA 103 703 607 HOH HOH . F 5 HOH AAA 104 704 712 HOH HOH . F 5 HOH AAA 105 705 615 HOH HOH . F 5 HOH AAA 106 706 666 HOH HOH . F 5 HOH AAA 107 707 631 HOH HOH . F 5 HOH AAA 108 708 650 HOH HOH . F 5 HOH AAA 109 709 703 HOH HOH . F 5 HOH AAA 110 710 681 HOH HOH . F 5 HOH AAA 111 711 646 HOH HOH . F 5 HOH AAA 112 712 660 HOH HOH . F 5 HOH AAA 113 713 684 HOH HOH . F 5 HOH AAA 114 714 604 HOH HOH . F 5 HOH AAA 115 715 664 HOH HOH . F 5 HOH AAA 116 716 635 HOH HOH . F 5 HOH AAA 117 717 601 HOH HOH . F 5 HOH AAA 118 718 641 HOH HOH . F 5 HOH AAA 119 719 683 HOH HOH . F 5 HOH AAA 120 720 708 HOH HOH . F 5 HOH AAA 121 721 710 HOH HOH . F 5 HOH AAA 122 722 709 HOH HOH . F 5 HOH AAA 123 723 730 HOH HOH . F 5 HOH AAA 124 724 642 HOH HOH . F 5 HOH AAA 125 725 716 HOH HOH . F 5 HOH AAA 126 726 704 HOH HOH . F 5 HOH AAA 127 727 705 HOH HOH . F 5 HOH AAA 128 728 647 HOH HOH . F 5 HOH AAA 129 729 651 HOH HOH . F 5 HOH AAA 130 730 656 HOH HOH . F 5 HOH AAA 131 731 636 HOH HOH . F 5 HOH AAA 132 732 639 HOH HOH . F 5 HOH AAA 133 733 715 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TEW . . . D 4 18.319 28.961 -0.282 0.7 42.36 0 O1 TEW 502 AAA 1 HETATM 2 O O2 TEW . . . D 4 20.709 28.667 0.527 0.7 43.17 0 O2 TEW 502 AAA 1 HETATM 3 O O3 TEW . . . D 4 19.651 31.142 0.024 0.7 51.76 0 O3 TEW 502 AAA 1 HETATM 4 O O4 TEW . . . D 4 20.51 27.971 -1.917 0.7 47.9 0 O4 TEW 502 AAA 1 HETATM 5 O O5 TEW . . . D 4 21.824 30.421 -1.488 0.7 48.85 0 O5 TEW 502 AAA 1 HETATM 6 O O6 TEW . . . D 4 19.491 30.478 -2.761 0.7 35.6 0 O6 TEW 502 AAA 1 HETATM 7 O O7 TEW . . . D 4 18.806 29.647 2.253 0.7 46 0 O7 TEW 502 AAA 1 HETATM 8 O O8 TEW . . . D 4 17.257 31.65 -0.836 0.7 33.05 0 O8 TEW 502 AAA 1 HETATM 9 O O9 TEW . . . D 4 17.95 32.367 1.76 0.7 44.64 0 O9 TEW 502 AAA 1 HETATM 10 O O10 TEW . . . D 4 16.4 29.95 1.536 0.7 42.35 0 O10 TEW 502 AAA 1 HETATM 11 O O11 TEW . . . D 4 19.864 27.2 2.781 0.7 44.62 0 O11 TEW 502 AAA 1 HETATM 12 O O12 TEW . . . D 4 17.393 27.408 2.072 0.7 44.18 0 O12 TEW 502 AAA 1 HETATM 13 O O13 TEW . . . D 4 19.484 26.363 0.223 0.7 50.45 0 O13 TEW 502 AAA 1 HETATM 14 O O14 TEW . . . D 4 21.987 26.256 1.11 0.7 42.03 0 O14 TEW 502 AAA 1 HETATM 15 O O15 TEW . . . D 4 22.973 27.689 -1.051 0.7 56.22 0 O15 TEW 502 AAA 1 HETATM 16 O O16 TEW . . . D 4 21.37 25.359 -1.547 0.7 52.33 0 O16 TEW 502 AAA 1 HETATM 17 O O17 TEW . . . D 4 17.768 28.194 4.586 0.7 48.38 0 O17 TEW 502 AAA 1 HETATM 18 O O18 TEW . . . D 4 15.295 28.65 3.585 0.7 53.27 0 O18 TEW 502 AAA 1 HETATM 19 O O19 TEW . . . D 4 17.085 30.798 4.168 0.7 49.36 0 O19 TEW 502 AAA 1 HETATM 20 O O20 TEW . . . D 4 18.73 25.002 2.653 0.7 58.28 0 O20 TEW 502 AAA 1 HETATM 21 O O21 TEW . . . D 4 16.561 25.598 4.176 0.7 47.98 0 O21 TEW 502 AAA 1 HETATM 22 O O22 TEW . . . D 4 18.997 25.994 5.367 0.7 41.35 0 O22 TEW 502 AAA 1 HETATM 23 O O23 TEW . . . D 4 21.317 24.821 3.408 0.7 46.18 0 O23 TEW 502 AAA 1 HETATM 24 O O31 TEW . . . D 4 20.433 23.708 0.996 0.7 59.03 0 O31 TEW 502 AAA 1 HETATM 25 TE TE1 TEW . . . D 4 19.028 27.982 1.225 0.7 47.02 0 TE1 TEW 502 AAA 1 HETATM 26 W W1 TEW . . . D 4 20.182 29.825 -1.311 0.7 50.41 0 W1 TEW 502 AAA 1 HETATM 27 W W2 TEW . . . D 4 17.782 30.962 0.706 0.7 46.31 0 W2 TEW 502 AAA 1 HETATM 28 W W3 TEW . . . D 4 21.493 26.848 -0.674 0.7 52.13 0 W3 TEW 502 AAA 1 HETATM 29 W W4 TEW . . . D 4 16.877 29.334 3.308 0.7 47.04 0 W4 TEW 502 AAA 1 HETATM 30 W W5 TEW . . . D 4 18.077 26.367 3.91 0.7 50.1 0 W5 TEW 502 AAA 1 HETATM 31 W W6 TEW . . . D 4 20.553 25.207 1.883 0.7 51.96 0 W6 TEW 502 AAA 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 288 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #